RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 KCNA3P22001 575 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 ITPK1Q13572 414 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 KDM3BQ7LBC6 1761 aa17.17■□□□□ 0.34
SSR4-211ENST00000486204 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
SSR4-211ENST00000486204 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
SSR4-211ENST00000486204 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
SSR4-211ENST00000486204 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
SSR4-211ENST00000486204 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
SSR4-211ENST00000486204 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
SSR4-211ENST00000486204 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
SSR4-211ENST00000486204 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
SSR4-211ENST00000486204 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SSR4-211ENST00000486204 MYH14Q7Z406 1995 aaKnown RBP17.14■□□□□ 0.33
SSR4-211ENST00000486204 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
SSR4-211ENST00000486204 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
SSR4-211ENST00000486204 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
SSR4-211ENST00000486204 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
SSR4-211ENST00000486204 VEGFAP15692 232 aaPredicted RBP17.11■□□□□ 0.33
SSR4-211ENST00000486204 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSR4-211ENST00000486204 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
SSR4-211ENST00000486204 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
SSR4-211ENST00000486204 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SSR4-211ENST00000486204 GYS1P13807 737 aa17.1■□□□□ 0.33
SSR4-211ENST00000486204 CABP4P57796 275 aa17.1■□□□□ 0.33
SSR4-211ENST00000486204 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
SSR4-211ENST00000486204 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
SSR4-211ENST00000486204 RFC4P35249 363 aa17.09■□□□□ 0.33
SSR4-211ENST00000486204 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
SSR4-211ENST00000486204 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
SSR4-211ENST00000486204 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
SSR4-211ENST00000486204 LAMB4A4D0S4 1761 aa17.09■□□□□ 0.33
SSR4-211ENST00000486204 BRCA1P38398 1863 aaKnown RBP17.08■□□□□ 0.33
SSR4-211ENST00000486204 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
SSR4-211ENST00000486204 ADRA2BP18089 450 aa17.08■□□□□ 0.32
SSR4-211ENST00000486204 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
SSR4-211ENST00000486204 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
SSR4-211ENST00000486204 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
SSR4-211ENST00000486204 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
SSR4-211ENST00000486204 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
SSR4-211ENST00000486204 NEFMP07197 916 aa17.07■□□□□ 0.32
SSR4-211ENST00000486204 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
SSR4-211ENST00000486204 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SSR4-211ENST00000486204 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
SSR4-211ENST00000486204 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
SSR4-211ENST00000486204 MCM10Q7L590 875 aa17.06■□□□□ 0.32
SSR4-211ENST00000486204 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
SSR4-211ENST00000486204 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
SSR4-211ENST00000486204 CHRNA5P30532 468 aa17.05■□□□□ 0.32
SSR4-211ENST00000486204 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
SSR4-211ENST00000486204 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
SSR4-211ENST00000486204 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
SSR4-211ENST00000486204 FOXN1O15353 648 aa17.04■□□□□ 0.32
SSR4-211ENST00000486204 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
SSR4-211ENST00000486204 RASSF7Q02833 373 aa17.04■□□□□ 0.32
SSR4-211ENST00000486204 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
SSR4-211ENST00000486204 TEFQ10587 303 aa17.03■□□□□ 0.32
SSR4-211ENST00000486204 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
SSR4-211ENST00000486204 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
SSR4-211ENST00000486204 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
SSR4-211ENST00000486204 LMNB1P20700 586 aa17.02■□□□□ 0.32
SSR4-211ENST00000486204 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
SSR4-211ENST00000486204 SBF1O95248 1867 aa17.01■□□□□ 0.31
SSR4-211ENST00000486204 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
SSR4-211ENST00000486204 RIPK4P57078 832 aa17.01■□□□□ 0.31
SSR4-211ENST00000486204 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
SSR4-211ENST00000486204 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
SSR4-211ENST00000486204 DDR1Q08345 913 aa17■□□□□ 0.31
SSR4-211ENST00000486204 FKBP8Q14318 412 aa17■□□□□ 0.31
SSR4-211ENST00000486204 FAM161AQ3B820 660 aa17■□□□□ 0.31
SSR4-211ENST00000486204 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
SSR4-211ENST00000486204 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
SSR4-211ENST00000486204 POTECB2RU33 542 aa16.99■□□□□ 0.31
SSR4-211ENST00000486204 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
SSR4-211ENST00000486204 CTCFP49711 727 aaPredicted RBP16.99■□□□□ 0.31
SSR4-211ENST00000486204 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
SSR4-211ENST00000486204 APAF1O14727 1248 aa16.98■□□□□ 0.31
SSR4-211ENST00000486204 ZNF790Q6PG37 636 aa16.98■□□□□ 0.31
SSR4-211ENST00000486204 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
SSR4-211ENST00000486204 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
SSR4-211ENST00000486204 KCNQ3O43525 872 aa16.97■□□□□ 0.31
SSR4-211ENST00000486204 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
SSR4-211ENST00000486204 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
SSR4-211ENST00000486204 HEG1Q9ULI3 1381 aa16.97■□□□□ 0.31
SSR4-211ENST00000486204 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
SSR4-211ENST00000486204 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
SSR4-211ENST00000486204 TAF7Q15545 349 aaPredicted RBP16.96■□□□□ 0.31
SSR4-211ENST00000486204 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
SSR4-211ENST00000486204 BCORQ6W2J9 1755 aa16.95■□□□□ 0.3
SSR4-211ENST00000486204 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
SSR4-211ENST00000486204 TM4SF1P30408 202 aa16.95■□□□□ 0.3
SSR4-211ENST00000486204 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
SSR4-211ENST00000486204 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
SSR4-211ENST00000486204 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
SSR4-211ENST00000486204 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
SSR4-211ENST00000486204 USP42Q9H9J4 1324 aaKnown RBP16.95■□□□□ 0.3
SSR4-211ENST00000486204 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms