RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SRP68Q9UHB9 627 aaKnown RBP25.93■■□□□ 1.74
SNX5-213ENST00000486039 C4AP0C0L4 1744 aa25.93■■□□□ 1.74
SNX5-213ENST00000486039 FMNL2Q96PY5 1086 aa25.92■■□□□ 1.74
SNX5-213ENST00000486039 NFE2L2Q16236 605 aa25.91■■□□□ 1.74
SNX5-213ENST00000486039 USP42Q9H9J4 1324 aaKnown RBP25.9■■□□□ 1.74
SNX5-213ENST00000486039 MAPK8IP3Q9UPT6 1336 aa25.89■■□□□ 1.74
SNX5-213ENST00000486039 STARD3NLO95772 234 aa25.89■■□□□ 1.74
SNX5-213ENST00000486039 CANXP27824 592 aaKnown RBP25.88■■□□□ 1.73
SNX5-213ENST00000486039 TEX13AQ9BXU3 409 aaPredicted RBP25.88■■□□□ 1.73
SNX5-213ENST00000486039 C1QTNF8P60827 252 aa25.87■■□□□ 1.73
SNX5-213ENST00000486039 FKBP8Q14318 412 aa25.87■■□□□ 1.73
SNX5-213ENST00000486039 TAF7Q15545 349 aaPredicted RBP25.87■■□□□ 1.73
SNX5-213ENST00000486039 WWC3Q9ULE0 1092 aa25.87■■□□□ 1.73
SNX5-213ENST00000486039 DLG5Q8TDM6 1919 aa25.86■■□□□ 1.73
SNX5-213ENST00000486039 COL15A1P39059 1388 aa25.86■■□□□ 1.73
SNX5-213ENST00000486039 ZNF316A6NFI3 1004 aaPredicted RBP25.85■■□□□ 1.73
SNX5-213ENST00000486039 USPL1Q5W0Q7 1092 aa25.85■■□□□ 1.73
SNX5-213ENST00000486039 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
SNX5-213ENST00000486039 MIS18AQ9NYP9 233 aa25.85■■□□□ 1.73
SNX5-213ENST00000486039 PRAMEF22A3QJZ6 481 aa25.84■■□□□ 1.73
SNX5-213ENST00000486039 ZPR1O75312 459 aa25.84■■□□□ 1.73
SNX5-213ENST00000486039 GIGYF1O75420 1035 aaPredicted RBP25.84■■□□□ 1.73
SNX5-213ENST00000486039 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
SNX5-213ENST00000486039 NARFQ9UHQ1 456 aa25.84■■□□□ 1.73
SNX5-213ENST00000486039 USP16Q9Y5T5 823 aa25.84■■□□□ 1.73
SNX5-213ENST00000486039 A1BGP04217 495 aa25.83■■□□□ 1.73
SNX5-213ENST00000486039 PARP3Q9Y6F1 533 aa25.83■■□□□ 1.73
SNX5-213ENST00000486039 TGFB2P61812 414 aa25.82■■□□□ 1.72
SNX5-213ENST00000486039 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
SNX5-213ENST00000486039 KIF13BQ9NQT8 1826 aa25.81■■□□□ 1.72
SNX5-213ENST00000486039 PXDNLA1KZ92 1463 aa25.81■■□□□ 1.72
SNX5-213ENST00000486039 RIPK4P57078 832 aa25.81■■□□□ 1.72
SNX5-213ENST00000486039 DDR1Q08345 913 aa25.81■■□□□ 1.72
SNX5-213ENST00000486039 WDR43Q15061 677 aaKnown RBP eCLIP25.81■■□□□ 1.72
SNX5-213ENST00000486039 BCL2L12Q9HB09 334 aa25.81■■□□□ 1.72
SNX5-213ENST00000486039 ADAMTS8Q9UP79 889 aa25.81■■□□□ 1.72
SNX5-213ENST00000486039 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
SNX5-213ENST00000486039 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
SNX5-213ENST00000486039 SNRPA1P09661 255 aaKnown RBP25.8■■□□□ 1.72
SNX5-213ENST00000486039 TM4SF1P30408 202 aa25.8■■□□□ 1.72
SNX5-213ENST00000486039 TMPOP42166 694 aaKnown RBP25.8■■□□□ 1.72
SNX5-213ENST00000486039 KIAA1551Q9HCM1 1747 aa25.78■■□□□ 1.72
SNX5-213ENST00000486039 IL6STP40189 918 aaPredicted RBP25.78■■□□□ 1.72
SNX5-213ENST00000486039 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
SNX5-213ENST00000486039 A0A087WZG4 1122 aa25.77■■□□□ 1.72
SNX5-213ENST00000486039 A0A0G2JLW4 131 aa25.77■■□□□ 1.72
SNX5-213ENST00000486039 POLRMTO00411 1230 aaKnown RBP25.77■■□□□ 1.72
SNX5-213ENST00000486039 RUNDC1Q96C34 613 aa25.77■■□□□ 1.72
SNX5-213ENST00000486039 RRP7AQ9Y3A4 280 aaKnown RBP25.77■■□□□ 1.72
SNX5-213ENST00000486039 ZNF330Q9Y3S2 320 aaPredicted RBP25.77■■□□□ 1.72
SNX5-213ENST00000486039 ADCY9O60503 1353 aa25.77■■□□□ 1.72
SNX5-213ENST00000486039 SENP3-EIF4A1A0A087X0R7 540 aa25.76■■□□□ 1.71
SNX5-213ENST00000486039 PIP4K2AP48426 406 aaPredicted RBP25.76■■□□□ 1.71
SNX5-213ENST00000486039 NFIXQ14938 502 aa25.76■■□□□ 1.71
SNX5-213ENST00000486039 N4BP2Q86UW6 1770 aaPredicted RBP25.75■■□□□ 1.71
SNX5-213ENST00000486039 TBC1D2BQ9UPU7 963 aa25.75■■□□□ 1.71
SNX5-213ENST00000486039 KDM3BQ7LBC6 1761 aa25.74■■□□□ 1.71
SNX5-213ENST00000486039 DPEP1P16444 411 aa25.74■■□□□ 1.71
SNX5-213ENST00000486039 EIF4A1P60842 406 aaKnown RBP25.74■■□□□ 1.71
SNX5-213ENST00000486039 BCS1LQ9Y276 419 aa25.74■■□□□ 1.71
SNX5-213ENST00000486039 NEUROD2Q15784 382 aa25.73■■□□□ 1.71
SNX5-213ENST00000486039 GPBP1L1Q9HC44 474 aaPredicted RBP25.73■■□□□ 1.71
SNX5-213ENST00000486039 LMOD3Q0VAK6 560 aa25.72■■□□□ 1.71
SNX5-213ENST00000486039 NBPF26B4DH59 902 aa25.71■■□□□ 1.71
SNX5-213ENST00000486039 CCDC184Q52MB2 194 aa25.71■■□□□ 1.71
SNX5-213ENST00000486039 NBPF10Q6P3W6 841 aaKnown RBP25.71■■□□□ 1.71
SNX5-213ENST00000486039 NBPF15Q8N660 670 aa25.71■■□□□ 1.71
SNX5-213ENST00000486039 TRIM35Q9UPQ4 493 aa25.7■■□□□ 1.7
SNX5-213ENST00000486039 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
SNX5-213ENST00000486039 KCNA3P22001 575 aa25.69■■□□□ 1.7
SNX5-213ENST00000486039 TBC1D9BQ66K14 1250 aa25.69■■□□□ 1.7
SNX5-213ENST00000486039 NPM2Q86SE8 214 aaKnown RBP25.69■■□□□ 1.7
SNX5-213ENST00000486039 TSPYL4Q9UJ04 414 aa25.69■■□□□ 1.7
SNX5-213ENST00000486039 BICDL1Q6ZP65 573 aa25.68■■□□□ 1.7
SNX5-213ENST00000486039 DZIP3Q86Y13 1208 aaKnown RBP25.68■■□□□ 1.7
SNX5-213ENST00000486039 ZNF526Q8TF50 670 aaPredicted RBP25.68■■□□□ 1.7
SNX5-213ENST00000486039 SCN7AQ01118 1682 aa25.68■■□□□ 1.7
SNX5-213ENST00000486039 SERPINB2P05120 415 aa25.67■■□□□ 1.7
SNX5-213ENST00000486039 ARHGAP27Q6ZUM4 889 aa25.66■■□□□ 1.7
SNX5-213ENST00000486039 BABAM1Q9NWV8 329 aa25.66■■□□□ 1.7
SNX5-213ENST00000486039 PIM2Q9P1W9 311 aa25.65■■□□□ 1.7
SNX5-213ENST00000486039 BRCA1P38398 1863 aaKnown RBP25.65■■□□□ 1.7
SNX5-213ENST00000486039 NRXN2Q9P2S2 1712 aa25.65■■□□□ 1.7
SNX5-213ENST00000486039 LAMB4A4D0S4 1761 aa25.64■■□□□ 1.7
SNX5-213ENST00000486039 AFDNP55196 1824 aaKnown RBP25.64■■□□□ 1.7
SNX5-213ENST00000486039 APAF1O14727 1248 aa25.62■■□□□ 1.69
SNX5-213ENST00000486039 ANP32CO43423 234 aa25.62■■□□□ 1.69
SNX5-213ENST00000486039 CHRNA5P30532 468 aa25.62■■□□□ 1.69
SNX5-213ENST00000486039 CHL1O00533 1208 aa25.61■■□□□ 1.69
SNX5-213ENST00000486039 DALRD3Q5D0E6 543 aaKnown RBP25.61■■□□□ 1.69
SNX5-213ENST00000486039 BCORQ6W2J9 1755 aa25.61■■□□□ 1.69
SNX5-213ENST00000486039 CARMIL3Q8ND23 1372 aa25.6■■□□□ 1.69
SNX5-213ENST00000486039 ARFGEF1Q9Y6D6 1849 aa25.59■■□□□ 1.69
SNX5-213ENST00000486039 CLEC4GQ6UXB4 293 aa25.59■■□□□ 1.69
SNX5-213ENST00000486039 SETDB2Q96T68 719 aa25.59■■□□□ 1.69
SNX5-213ENST00000486039 LAS1LQ9Y4W2 734 aaKnown RBP25.59■■□□□ 1.69
SNX5-213ENST00000486039 NGEFQ8N5V2 710 aa25.58■■□□□ 1.69
SNX5-213ENST00000486039 PRR5LQ6MZQ0 368 aa25.57■■□□□ 1.68
SNX5-213ENST00000486039 KIF3CO14782 793 aa25.56■■□□□ 1.68
SNX5-213ENST00000486039 MYL6BP14649 208 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms