RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
SND1-213ENST00000486037 CRKLP46109 303 aaKnown RBP13.74□□□□□ -0.21
SND1-213ENST00000486037 RGS19P49795 217 aa13.74□□□□□ -0.21
SND1-213ENST00000486037 NEUROD1Q13562 356 aa13.74□□□□□ -0.21
SND1-213ENST00000486037 TESK2Q96S53 571 aa13.74□□□□□ -0.21
SND1-213ENST00000486037 CARMIL3Q8ND23 1372 aa13.73□□□□□ -0.21
SND1-213ENST00000486037 CCDC85CA6NKD9 419 aa13.73□□□□□ -0.21
SND1-213ENST00000486037 TJP1Q07157 1748 aa13.73□□□□□ -0.21
SND1-213ENST00000486037 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
SND1-213ENST00000486037 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
SND1-213ENST00000486037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.214e-7■□□□□ 10
SND1-213ENST00000486037 NRXN2Q9P2S2 1712 aa13.72□□□□□ -0.21
SND1-213ENST00000486037 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
SND1-213ENST00000486037 KIF20BQ96Q89 1820 aa13.71□□□□□ -0.21
SND1-213ENST00000486037 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
SND1-213ENST00000486037 TTLL6Q8N841 843 aa13.71□□□□□ -0.21
SND1-213ENST00000486037 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
SND1-213ENST00000486037 NFIXQ14938 502 aa13.7□□□□□ -0.22
SND1-213ENST00000486037 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
SND1-213ENST00000486037 INTS5Q6P9B9 1019 aaKnown RBP13.7□□□□□ -0.22
SND1-213ENST00000486037 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
SND1-213ENST00000486037 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
SND1-213ENST00000486037 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
SND1-213ENST00000486037 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
SND1-213ENST00000486037 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
SND1-213ENST00000486037 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
SND1-213ENST00000486037 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
SND1-213ENST00000486037 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
SND1-213ENST00000486037 FER1L6Q2WGJ9 1857 aa13.68□□□□□ -0.22
SND1-213ENST00000486037 TMEM88BA6NKF7 163 aa13.68□□□□□ -0.22
SND1-213ENST00000486037 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
SND1-213ENST00000486037 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
SND1-213ENST00000486037 C21orf2O43822 256 aa13.67□□□□□ -0.22
SND1-213ENST00000486037 SERPINB2P05120 415 aa13.66□□□□□ -0.22
SND1-213ENST00000486037 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
SND1-213ENST00000486037 TAF1DQ9H5J8 278 aaPredicted RBP13.66□□□□□ -0.22
SND1-213ENST00000486037 COL11A2P13942 1736 aaPredicted RBP13.66□□□□□ -0.22
SND1-213ENST00000486037 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
SND1-213ENST00000486037 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
SND1-213ENST00000486037 ANKRD31Q8N7Z5 1873 aa13.65□□□□□ -0.22
SND1-213ENST00000486037 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
SND1-213ENST00000486037 CABP4P57796 275 aa13.65□□□□□ -0.22
SND1-213ENST00000486037 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
SND1-213ENST00000486037 ADAMTSL1Q8N6G6 1762 aa13.65□□□□□ -0.22
SND1-213ENST00000486037 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
SND1-213ENST00000486037 ZPR1O75312 459 aa13.64□□□□□ -0.23
SND1-213ENST00000486037 DEFB115Q30KQ5 88 aa13.64□□□□□ -0.23
SND1-213ENST00000486037 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
SND1-213ENST00000486037 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
SND1-213ENST00000486037 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
SND1-213ENST00000486037 H0YIN7 160 aa13.63□□□□□ -0.23
SND1-213ENST00000486037 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
SND1-213ENST00000486037 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
SND1-213ENST00000486037 THSD7BQ9C0I4 1608 aa13.63□□□□□ -0.23
SND1-213ENST00000486037 PDE4DIPQ5VU43 2346 aa13.63□□□□□ -0.23
SND1-213ENST00000486037 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
SND1-213ENST00000486037 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■□□□ 12.1
SND1-213ENST00000486037 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
SND1-213ENST00000486037 NFATC2IPQ8NCF5 419 aa13.62□□□□□ -0.23
SND1-213ENST00000486037 L3MBTL3Q96JM7 780 aaPredicted RBP13.62□□□□□ -0.23
SND1-213ENST00000486037 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
SND1-213ENST00000486037 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
SND1-213ENST00000486037 COL15A1P39059 1388 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 MAP1SQ66K74 1059 aaPredicted RBP13.61□□□□□ -0.23
SND1-213ENST00000486037 ZNF530Q6P9A1 599 aaPredicted RBP13.61□□□□□ -0.23
SND1-213ENST00000486037 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
SND1-213ENST00000486037 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 SCN4AP35499 1836 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 SLX4Q8IY92 1834 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
SND1-213ENST00000486037 LTBP1Q14766 1721 aa13.6□□□□□ -0.23
SND1-213ENST00000486037 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
SND1-213ENST00000486037 MCOLN1Q9GZU1 580 aa13.6□□□□□ -0.23
SND1-213ENST00000486037 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
SND1-213ENST00000486037 CACNA1SQ13698 1873 aa13.59□□□□□ -0.23
SND1-213ENST00000486037 IQCA1LA6NCM1 817 aa13.59□□□□□ -0.23
SND1-213ENST00000486037 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
SND1-213ENST00000486037 CYP19A1P11511 503 aaPredicted RBP13.59□□□□□ -0.23
SND1-213ENST00000486037 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
SND1-213ENST00000486037 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
SND1-213ENST00000486037 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
SND1-213ENST00000486037 ABT1Q9ULW3 272 aaKnown RBP13.58□□□□□ -0.24
SND1-213ENST00000486037 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
SND1-213ENST00000486037 MTHFSP49914 203 aa13.57□□□□□ -0.24
SND1-213ENST00000486037 GRM1Q13255 1194 aa13.57□□□□□ -0.24
SND1-213ENST00000486037 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
SND1-213ENST00000486037 CASP8AP2Q9UKL3 1982 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 AOC2O75106 756 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 EPHX2P34913 555 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 SLC39A6Q13433 755 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
SND1-213ENST00000486037 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 AEBP1Q8IUX7 1158 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 HACL1Q9UJ83 578 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
SND1-213ENST00000486037 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
SND1-213ENST00000486037 SCN11AQ9UI33 1791 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms