RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 COL18A1P39060 1754 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 NFAT5O94916 1531 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 KIAA0232Q92628 1395 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 USP19O94966 1318 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 FAM83GA6ND36 823 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 PPM1GO15355 546 aaPredicted RBP7.64□□□□□ -1.19
COPS3-208ENST00000486032 PER1O15534 1290 aaPredicted RBP7.64□□□□□ -1.19
COPS3-208ENST00000486032 RNF40O75150 1001 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 CRIPAKQ8N1N5 446 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 DDX27Q96GQ7 796 aaKnown RBP7.64□□□□□ -1.19
COPS3-208ENST00000486032 RGPD5Q99666 1765 aa7.64□□□□□ -1.19
COPS3-208ENST00000486032 CAMTA1Q9Y6Y1 1673 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 BRD4O60885 1362 aaPredicted RBP7.63□□□□□ -1.19
COPS3-208ENST00000486032 SMAPO00193 183 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 ZPR1O75312 459 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 RRS1Q15050 365 aaKnown RBP7.63□□□□□ -1.19
COPS3-208ENST00000486032 AMER1Q5JTC6 1135 aaPredicted RBP7.63□□□□□ -1.19
COPS3-208ENST00000486032 FNBP4Q8N3X1 1017 aaPredicted RBP7.63□□□□□ -1.19
COPS3-208ENST00000486032 NGLY1Q96IV0 654 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 LARP6Q9BRS8 491 aaKnown RBP7.63□□□□□ -1.19
COPS3-208ENST00000486032 EMILIN3Q9NT22 766 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 USP21Q9UK80 565 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 BRWD3Q6RI45 1802 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 COL14A1Q05707 1796 aaKnown RBP7.63□□□□□ -1.19
COPS3-208ENST00000486032 USP54Q70EL1 1684 aa7.63□□□□□ -1.19
COPS3-208ENST00000486032 NWD2Q9ULI1 1742 aa7.62□□□□□ -1.19
COPS3-208ENST00000486032 ANP32CO43423 234 aa7.62□□□□□ -1.19
COPS3-208ENST00000486032 GCP02774 474 aa7.62□□□□□ -1.19
COPS3-208ENST00000486032 DIEXFQ68CQ4 756 aaKnown RBP7.62□□□□□ -1.19
COPS3-208ENST00000486032 KCNH5Q8NCM2 988 aa7.62□□□□□ -1.19
COPS3-208ENST00000486032 NECTIN2Q92692 538 aa7.62□□□□□ -1.19
COPS3-208ENST00000486032 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
COPS3-208ENST00000486032 OVOS2A0A0J9YW53 1432 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 OVOS2Q6IE36 1432 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 USP31Q70CQ4 1352 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 AMPHP49418 695 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 LIAT1Q6ZQX7 453 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 ANKLE1Q8NAG6 615 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
COPS3-208ENST00000486032 PRDM11Q9NQV5 511 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 PEAK1Q9H792 1746 aa7.61□□□□□ -1.19
COPS3-208ENST00000486032 NSD2O96028 1365 aa7.6□□□□□ -1.19
COPS3-208ENST00000486032 SOCS7O14512 581 aa7.6□□□□□ -1.19
COPS3-208ENST00000486032 STRN4Q9NRL3 753 aa7.6□□□□□ -1.19
COPS3-208ENST00000486032 BTG4Q9NY30 223 aa7.6□□□□□ -1.19
COPS3-208ENST00000486032 EMILIN1Q9Y6C2 1016 aa7.6□□□□□ -1.19
COPS3-208ENST00000486032 LTN1O94822 1766 aa7.6□□□□□ -1.19
COPS3-208ENST00000486032 MAP3K19Q56UN5 1328 aa7.59□□□□□ -1.19
COPS3-208ENST00000486032 ANKRD26Q9UPS8 1709 aa7.59□□□□□ -1.19
COPS3-208ENST00000486032 TERTO14746 1132 aaKnown RBP7.59□□□□□ -1.19
COPS3-208ENST00000486032 LCE2CQ5TA81 110 aa7.59□□□□□ -1.19
COPS3-208ENST00000486032 ZNF772Q68DY9 489 aaPredicted RBP7.59□□□□□ -1.19
COPS3-208ENST00000486032 COL5A2P05997 1499 aaPredicted RBP7.59□□□□□ -1.19
COPS3-208ENST00000486032 THSD7AQ9UPZ6 1657 aa7.59□□□□□ -1.19
COPS3-208ENST00000486032 WNK3Q9BYP7 1800 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 AXIN1O15169 862 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 RXRBP28702 533 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 PPP2R1AP30153 589 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 MTHFSP49914 203 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 EVA1CP58658 441 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 HS6ST3Q8IZP7 471 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 PRKRIP1Q9H875 184 aaPredicted RBP7.58□□□□□ -1.2
COPS3-208ENST00000486032 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
COPS3-208ENST00000486032 POLKQ9UBT6 870 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 CCDC9Q9Y3X0 531 aaKnown RBP7.58□□□□□ -1.2
COPS3-208ENST00000486032 RGPD2P0DJD1 1756 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 NPC1L1Q9UHC9 1359 aa7.58□□□□□ -1.2
COPS3-208ENST00000486032 MAP2P11137 1827 aaKnown RBP7.57□□□□□ -1.2
COPS3-208ENST00000486032 HOXC9P31274 260 aa7.57□□□□□ -1.2
COPS3-208ENST00000486032 RALBP1Q15311 655 aa7.57□□□□□ -1.2
COPS3-208ENST00000486032 LARP1Q6PKG0 1096 aaKnown RBP7.57□□□□□ -1.2
COPS3-208ENST00000486032 ARHGEF25Q86VW2 580 aa7.57□□□□□ -1.2
COPS3-208ENST00000486032 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
COPS3-208ENST00000486032 CPDO75976 1380 aa7.57□□□□□ -1.2
COPS3-208ENST00000486032 EP400Q96L91 3159 aa7.57□□□□□ -1.2
COPS3-208ENST00000486032 CDK12Q9NYV4 1490 aaPredicted RBP7.56□□□□□ -1.2
COPS3-208ENST00000486032 MYBBP1AQ9BQG0 1328 aaKnown RBP7.56□□□□□ -1.2
COPS3-208ENST00000486032 NBPF26B4DH59 902 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 RBM6P78332 1123 aaKnown RBP7.56□□□□□ -1.2
COPS3-208ENST00000486032 MFSD10Q14728 455 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 VPS72Q15906 364 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 HSP90AB2PQ58FF8 381 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 ANKRD24Q8TF21 1146 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 IP6K1Q92551 441 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 TATDN2Q93075 761 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 CDCA7LQ96GN5 454 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 GJD4Q96KN9 370 aaPredicted RBP7.56□□□□□ -1.2
COPS3-208ENST00000486032 USP35Q9P2H5 1018 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 PARD3Q8TEW0 1356 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 LRRC37A3O60309 1634 aa7.56□□□□□ -1.2
COPS3-208ENST00000486032 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 PPEF1O14829 653 aaPredicted RBP7.55□□□□□ -1.2
COPS3-208ENST00000486032 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
COPS3-208ENST00000486032 AVPP01185 164 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 CTC1Q2NKJ3 1217 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms