RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 BABAM1Q9NWV8 329 aa27.24■■□□□ 1.95
CLN5-202ENST00000485938 NWD1Q149M9 1564 aa27.24■■□□□ 1.95
CLN5-202ENST00000485938 NUTM1Q86Y26 1132 aa27.24■■□□□ 1.95
CLN5-202ENST00000485938 NGDNQ8NEJ9 315 aaKnown RBP27.24■■□□□ 1.95
CLN5-202ENST00000485938 RAB11FIP3O75154 756 aa27.23■■□□□ 1.95
CLN5-202ENST00000485938 SLC26A8Q96RN1 970 aa27.23■■□□□ 1.95
CLN5-202ENST00000485938 R3HCC1Q9Y3T6 440 aaKnown RBP27.23■■□□□ 1.95
CLN5-202ENST00000485938 GADD45BO75293 160 aaPredicted RBP27.23■■□□□ 1.95
CLN5-202ENST00000485938 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
CLN5-202ENST00000485938 POLA2Q14181 598 aa27.22■■□□□ 1.95
CLN5-202ENST00000485938 PI4K2BQ8TCG2 481 aa27.22■■□□□ 1.95
CLN5-202ENST00000485938 PDCL3Q9H2J4 239 aa27.22■■□□□ 1.95
CLN5-202ENST00000485938 GDPD2Q9HCC8 539 aa27.22■■□□□ 1.95
CLN5-202ENST00000485938 RGPD8O14715 1765 aaPredicted RBP27.22■■□□□ 1.95
CLN5-202ENST00000485938 USP48Q86UV5 1035 aa27.21■■□□□ 1.95
CLN5-202ENST00000485938 RAD50Q92878 1312 aa27.21■■□□□ 1.95
CLN5-202ENST00000485938 PPP1R42Q7Z4L9 355 aa27.21■■□□□ 1.95
CLN5-202ENST00000485938 FOXD4L6Q3SYB3 417 aaPredicted RBP27.2■■□□□ 1.94
CLN5-202ENST00000485938 FOXD4L3Q6VB84 417 aaPredicted RBP27.2■■□□□ 1.94
CLN5-202ENST00000485938 RPAP1Q9BWH6 1393 aaPredicted RBP27.2■■□□□ 1.94
CLN5-202ENST00000485938 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
CLN5-202ENST00000485938 SGSM2O43147 1006 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 PHF14O94880 888 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 HOXC9P31274 260 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 CSPP1Q1MSJ5 1256 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 AMOTL2Q9Y2J4 779 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 SURF6O75683 361 aaKnown RBP27.19■■□□□ 1.94
CLN5-202ENST00000485938 HDGFL1Q5TGJ6 251 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 RHPN1Q8TCX5 695 aa27.19■■□□□ 1.94
CLN5-202ENST00000485938 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
CLN5-202ENST00000485938 MAP4K4O95819 1239 aaPredicted RBP27.18■■□□□ 1.94
CLN5-202ENST00000485938 TMEM87AQ8NBN3 555 aa27.18■■□□□ 1.94
CLN5-202ENST00000485938 NLRP6P59044 892 aa27.17■■□□□ 1.94
CLN5-202ENST00000485938 TTC14Q96N46 770 aa27.17■■□□□ 1.94
CLN5-202ENST00000485938 SNX14Q9Y5W7 946 aa27.17■■□□□ 1.94
CLN5-202ENST00000485938 TCHHQ07283 1943 aa27.17■■□□□ 1.94
CLN5-202ENST00000485938 LSG1Q9H089 658 aaKnown RBP27.16■■□□□ 1.94
CLN5-202ENST00000485938 MARF1Q9Y4F3 1742 aaKnown RBP27.15■■□□□ 1.94
CLN5-202ENST00000485938 KIF1BPQ96EK5 621 aa27.15■■□□□ 1.94
CLN5-202ENST00000485938 SRGAP3O43295 1099 aa27.13■■□□□ 1.93
CLN5-202ENST00000485938 RASEFQ8IZ41 740 aa27.13■■□□□ 1.93
CLN5-202ENST00000485938 VSIG10Q8N0Z9 540 aa27.13■■□□□ 1.93
CLN5-202ENST00000485938 ZSCAN22P10073 491 aaPredicted RBP27.12■■□□□ 1.93
CLN5-202ENST00000485938 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
CLN5-202ENST00000485938 FAM184AQ8NB25 1140 aa27.12■■□□□ 1.93
CLN5-202ENST00000485938 FER1L4A9Z1Z3 1794 aa27.12■■□□□ 1.93
CLN5-202ENST00000485938 CRYBG1Q9Y4K1 1723 aa27.12■■□□□ 1.93
CLN5-202ENST00000485938 AK2P54819 239 aa27.12■■□□□ 1.93
CLN5-202ENST00000485938 RUFY3Q7L099 469 aa27.12■■□□□ 1.93
CLN5-202ENST00000485938 LIMCH1Q9UPQ0 1083 aa27.11■■□□□ 1.93
CLN5-202ENST00000485938 CNPY2Q9Y2B0 182 aa27.11■■□□□ 1.93
CLN5-202ENST00000485938 PTMAP06454 111 aaKnown RBP27.11■■□□□ 1.93
CLN5-202ENST00000485938 NBPF7P0C2Y1 421 aaPredicted RBP27.11■■□□□ 1.93
CLN5-202ENST00000485938 UVSSAQ2YD98 709 aa27.11■■□□□ 1.93
CLN5-202ENST00000485938 CCDC183Q5T5S1 534 aa27.11■■□□□ 1.93
CLN5-202ENST00000485938 EID1Q9Y6B2 187 aa27.11■■□□□ 1.93
CLN5-202ENST00000485938 UQCRHLA0A096LP55 91 aa27.1■■□□□ 1.93
CLN5-202ENST00000485938 UQCRHP07919 91 aa27.1■■□□□ 1.93
CLN5-202ENST00000485938 NUTM2GQ5VZR2 741 aa27.1■■□□□ 1.93
CLN5-202ENST00000485938 RBM10P98175 930 aaKnown RBP27.1■■□□□ 1.93
CLN5-202ENST00000485938 LTV1Q96GA3 475 aaPredicted RBP27.1■■□□□ 1.93
CLN5-202ENST00000485938 TBX22Q9Y458 520 aa27.1■■□□□ 1.93
CLN5-202ENST00000485938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.1■■□□□ 1.93
CLN5-202ENST00000485938 USP42Q9H9J4 1324 aaKnown RBP27.09■■□□□ 1.93
CLN5-202ENST00000485938 USP54Q70EL1 1684 aa27.09■■□□□ 1.93
CLN5-202ENST00000485938 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
CLN5-202ENST00000485938 STX6O43752 255 aa27.08■■□□□ 1.93
CLN5-202ENST00000485938 SYT1P21579 422 aa27.08■■□□□ 1.93
CLN5-202ENST00000485938 BEND3Q5T5X7 828 aa27.08■■□□□ 1.93
CLN5-202ENST00000485938 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.08■■□□□ 1.93
CLN5-202ENST00000485938 EIF2S2P20042 333 aaKnown RBP27.07■■□□□ 1.92
CLN5-202ENST00000485938 CWC27Q6UX04 472 aaKnown RBP27.07■■□□□ 1.92
CLN5-202ENST00000485938 UBE2HP62256 183 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 KIAA2012Q0VF49 1180 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 SASS6Q6UVJ0 657 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 USHBP1Q8N6Y0 703 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 LARP6Q9BRS8 491 aaKnown RBP27.06■■□□□ 1.92
CLN5-202ENST00000485938 SPG7Q9UQ90 795 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 EIF4A1P60842 406 aaKnown RBP27.06■■□□□ 1.92
CLN5-202ENST00000485938 HSP90AB4PQ58FF6 505 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 ANKARQ7Z5J8 1434 aa27.06■■□□□ 1.92
CLN5-202ENST00000485938 MED1Q15648 1581 aaPredicted RBP27.05■■□□□ 1.92
CLN5-202ENST00000485938 LETM1O95202 739 aaPredicted RBP27.05■■□□□ 1.92
CLN5-202ENST00000485938 F13A1P00488 732 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 CHPF2Q9P2E5 772 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 TTC41PQ6P2S7 1318 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 PI4KAP2A4QPH2 592 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 PI4KAP1Q8N8J0 262 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 SMC3Q9UQE7 1217 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 SLIT1O75093 1534 aa27.05■■□□□ 1.92
CLN5-202ENST00000485938 ARHGAP23Q9P227 1491 aa27.04■■□□□ 1.92
CLN5-202ENST00000485938 HOXB7P09629 217 aa27.04■■□□□ 1.92
CLN5-202ENST00000485938 FAM13BQ9NYF5 915 aa27.04■■□□□ 1.92
CLN5-202ENST00000485938 GLRX3O76003 335 aaKnown RBP27.04■■□□□ 1.92
CLN5-202ENST00000485938 HYPKQ9NX55 129 aa27.04■■□□□ 1.92
CLN5-202ENST00000485938 USP25Q9UHP3 1055 aa27.04■■□□□ 1.92
CLN5-202ENST00000485938 DYNC1I1O14576 645 aa27.03■■□□□ 1.92
CLN5-202ENST00000485938 CASTP20810 708 aaKnown RBP27.03■■□□□ 1.92
CLN5-202ENST00000485938 MAP7D2Q96T17 732 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms