RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 LRRC4BQ9NT99 713 aa7.83□□□□□ -1.16
CUX1-208ENST00000485792 ZNF827Q17R98 1081 aa7.82□□□□□ -1.16
CUX1-208ENST00000485792 UTRNP46939 3433 aa7.81□□□□□ -1.16
CUX1-208ENST00000485792 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
CUX1-208ENST00000485792 PPM1GO15355 546 aaPredicted RBP7.81□□□□□ -1.16
CUX1-208ENST00000485792 PPP2R1AP30153 589 aa7.81□□□□□ -1.16
CUX1-208ENST00000485792 MTHFSP49914 203 aa7.81□□□□□ -1.16
CUX1-208ENST00000485792 CNGB1Q14028 1251 aaPredicted RBP7.81□□□□□ -1.16
CUX1-208ENST00000485792 SLC4A9Q96Q91 983 aa7.81□□□□□ -1.16
CUX1-208ENST00000485792 LAMB4A4D0S4 1761 aa7.8□□□□□ -1.16
CUX1-208ENST00000485792 C3orf67Q6ZVT6 689 aa7.8□□□□□ -1.16
CUX1-208ENST00000485792 SMIM5Q71RC9 77 aa7.8□□□□□ -1.16
CUX1-208ENST00000485792 MORC1Q86VD1 984 aa7.8□□□□□ -1.16
CUX1-208ENST00000485792 VSIG10Q8N0Z9 540 aa7.8□□□□□ -1.16
CUX1-208ENST00000485792 ZCRB1Q8TBF4 217 aaKnown RBP7.8□□□□□ -1.16
CUX1-208ENST00000485792 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.8□□□□□ -1.16
CUX1-208ENST00000485792 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
CUX1-208ENST00000485792 PHKG2P15735 406 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 BAG6P46379 1132 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 CCDC184Q52MB2 194 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 DPY19L2Q6NUT2 758 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 SCN7AQ01118 1682 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 BCORQ6W2J9 1755 aa7.79□□□□□ -1.16
CUX1-208ENST00000485792 APBA3O96018 575 aa7.78□□□□□ -1.16
CUX1-208ENST00000485792 HMOX1P09601 288 aa7.78□□□□□ -1.16
CUX1-208ENST00000485792 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
CUX1-208ENST00000485792 PCDH11XQ9BZA7 1347 aa7.78□□□□□ -1.16
CUX1-208ENST00000485792 PCDH11YQ9BZA8 1340 aa7.78□□□□□ -1.16
CUX1-208ENST00000485792 ZEB1P37275 1124 aaPredicted RBP7.77□□□□□ -1.17
CUX1-208ENST00000485792 PRIM1P49642 420 aaKnown RBP7.77□□□□□ -1.17
CUX1-208ENST00000485792 R3HDM1Q15032 1099 aaKnown RBP7.77□□□□□ -1.17
CUX1-208ENST00000485792 SULT6B1Q6IMI4 303 aa7.77□□□□□ -1.17
CUX1-208ENST00000485792 SLAIN1Q8ND83 568 aa7.77□□□□□ -1.17
CUX1-208ENST00000485792 PHACTR3Q96KR7 559 aa7.77□□□□□ -1.17
CUX1-208ENST00000485792 RSPH6AQ9H0K4 717 aa7.77□□□□□ -1.17
CUX1-208ENST00000485792 KIF13BQ9NQT8 1826 aa7.77□□□□□ -1.17
CUX1-208ENST00000485792 PALLDQ8WX93 1383 aa7.76□□□□□ -1.17
CUX1-208ENST00000485792 TATP17735 454 aaPredicted RBP7.76□□□□□ -1.17
CUX1-208ENST00000485792 DDX10Q13206 875 aaKnown RBP7.76□□□□□ -1.17
CUX1-208ENST00000485792 SF3B2Q13435 895 aaKnown RBP7.76□□□□□ -1.17
CUX1-208ENST00000485792 ITPK1Q13572 414 aa7.76□□□□□ -1.17
CUX1-208ENST00000485792 TXNRD1Q16881 649 aa7.76□□□□□ -1.17
CUX1-208ENST00000485792 RAPGEF4Q8WZA2 1011 aa7.76□□□□□ -1.17
CUX1-208ENST00000485792 PIGBQ92521 554 aa7.76□□□□□ -1.17
CUX1-208ENST00000485792 BRCA1P38398 1863 aaKnown RBP7.76□□□□□ -1.17
CUX1-208ENST00000485792 PNPLA7Q6ZV29 1317 aa7.76□□□□□ -1.17
CUX1-208ENST00000485792 CEMIPQ8WUJ3 1361 aa7.75□□□□□ -1.17
CUX1-208ENST00000485792 MTHFSDQ2M296 383 aaKnown RBP7.75□□□□□ -1.17
CUX1-208ENST00000485792 MICALL2Q8IY33 904 aa7.75□□□□□ -1.17
CUX1-208ENST00000485792 COL11A2P13942 1736 aaPredicted RBP7.75□□□□□ -1.17
CUX1-208ENST00000485792 NRXN2Q9P2S2 1712 aa7.75□□□□□ -1.17
CUX1-208ENST00000485792 AMOTQ4VCS5 1084 aa7.74□□□□□ -1.17
CUX1-208ENST00000485792 PLEKHF1Q96S99 279 aa7.74□□□□□ -1.17
CUX1-208ENST00000485792 TMEM121BQ9BXQ6 578 aaPredicted RBP7.74□□□□□ -1.17
CUX1-208ENST00000485792 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
CUX1-208ENST00000485792 ASAP1Q9ULH1 1129 aa7.74□□□□□ -1.17
CUX1-208ENST00000485792 AFDNP55196 1824 aaKnown RBP7.73□□□□□ -1.17
CUX1-208ENST00000485792 ANKRD31Q8N7Z5 1873 aa7.73□□□□□ -1.17
CUX1-208ENST00000485792 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
CUX1-208ENST00000485792 PTGER2P43116 358 aa7.73□□□□□ -1.17
CUX1-208ENST00000485792 IFNL2Q8IZJ0 200 aa7.73□□□□□ -1.17
CUX1-208ENST00000485792 LINC00116Q8NCU8 138 aa7.73□□□□□ -1.17
CUX1-208ENST00000485792 ATG3Q9NT62 314 aa7.73□□□□□ -1.17
CUX1-208ENST00000485792 SPG7Q9UQ90 795 aa7.73□□□□□ -1.17
CUX1-208ENST00000485792 ERVV-2B6SEH9 535 aa7.72□□□□□ -1.17
CUX1-208ENST00000485792 SLC27A3Q5K4L6 730 aa7.72□□□□□ -1.17
CUX1-208ENST00000485792 ZNF530Q6P9A1 599 aaPredicted RBP7.72□□□□□ -1.17
CUX1-208ENST00000485792 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
CUX1-208ENST00000485792 IL17REQ8NFR9 667 aa7.72□□□□□ -1.17
CUX1-208ENST00000485792 MAP3K5Q99683 1374 aa7.71□□□□□ -1.17
CUX1-208ENST00000485792 DLEC1Q9Y238 1755 aa7.71□□□□□ -1.17
CUX1-208ENST00000485792 CACNA1FO60840 1977 aa7.71□□□□□ -1.17
CUX1-208ENST00000485792 TNRC6CQ9HCJ0 1690 aaKnown RBP7.71□□□□□ -1.18
CUX1-208ENST00000485792 KCNQ3O43525 872 aa7.71□□□□□ -1.18
CUX1-208ENST00000485792 PRKAR2BP31323 418 aa7.71□□□□□ -1.18
CUX1-208ENST00000485792 RALBP1Q15311 655 aa7.71□□□□□ -1.18
CUX1-208ENST00000485792 PLEKHO1Q53GL0 409 aaPredicted RBP7.71□□□□□ -1.18
CUX1-208ENST00000485792 DCAF5Q96JK2 942 aa7.71□□□□□ -1.18
CUX1-208ENST00000485792 PRKRIP1Q9H875 184 aaPredicted RBP7.71□□□□□ -1.18
CUX1-208ENST00000485792 CHD4Q14839 1912 aa7.71□□□□□ -1.18
CUX1-208ENST00000485792 N4BP2Q86UW6 1770 aaPredicted RBP7.71□□□□□ -1.18
CUX1-208ENST00000485792 COL4A1P02462 1669 aa7.7□□□□□ -1.18
CUX1-208ENST00000485792 RNMTO43148 476 aaKnown RBP7.7□□□□□ -1.18
CUX1-208ENST00000485792 FCHSD2O94868 740 aa7.7□□□□□ -1.18
CUX1-208ENST00000485792 HSP90AB1P08238 724 aaKnown RBP7.7□□□□□ -1.18
CUX1-208ENST00000485792 DCTN1Q14203 1278 aa7.7□□□□□ -1.18
CUX1-208ENST00000485792 SLC15A2Q16348 729 aa7.7□□□□□ -1.18
CUX1-208ENST00000485792 SYTL4Q96C24 671 aaPredicted RBP7.7□□□□□ -1.18
CUX1-208ENST00000485792 PRAMEF22A3QJZ6 481 aa7.69□□□□□ -1.18
CUX1-208ENST00000485792 SLC39A6Q13433 755 aa7.69□□□□□ -1.18
CUX1-208ENST00000485792 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
CUX1-208ENST00000485792 THUMPD2Q9BTF0 503 aaKnown RBP7.69□□□□□ -1.18
CUX1-208ENST00000485792 CRISPLD2Q9H0B8 497 aa7.69□□□□□ -1.18
CUX1-208ENST00000485792 MYBBP1AQ9BQG0 1328 aaKnown RBP7.69□□□□□ -1.18
CUX1-208ENST00000485792 U2SURPO15042 1029 aaKnown RBP7.68□□□□□ -1.18
CUX1-208ENST00000485792 NBPF14Q5TI25 921 aa7.68□□□□□ -1.18
CUX1-208ENST00000485792 COL23A1Q86Y22 540 aaPredicted RBP7.68□□□□□ -1.18
CUX1-208ENST00000485792 CCNL1Q9UK58 526 aaPredicted RBP7.68□□□□□ -1.18
CUX1-208ENST00000485792 NUP98P52948 1817 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms