RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 TATP17735 454 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 CTBSQ01459 385 aa11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 GALNT6Q8NCL4 622 aa11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 NDFIP2Q9NV92 336 aa11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 DNAAF2Q9NVR5 837 aaKnown RBP11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 ZNF358Q9NW07 568 aa11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC10-211ENST00000485621 A0A1W2PNR3 127 aa11.88□□□□□ -0.51
TRAPPC10-211ENST00000485621 C2CD2LO14523 706 aa11.88□□□□□ -0.51
TRAPPC10-211ENST00000485621 NLRP8Q86W28 1048 aa11.88□□□□□ -0.51
TRAPPC10-211ENST00000485621 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC10-211ENST00000485621 PCDHGC4Q9Y5F7 938 aa11.88□□□□□ -0.51
TRAPPC10-211ENST00000485621 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 SHISA8B8ZZ34 492 aa11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 ATXN7O15265 892 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 GPAT2Q6NUI2 795 aa11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 C1orf229Q6ZS94 237 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 TRIM50Q86XT4 487 aa11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 SCHIP1Q9P0W5 487 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 GJA3Q9Y6H8 435 aa11.86□□□□□ -0.51
TRAPPC10-211ENST00000485621 USP17L3A6NCW0 530 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 USP17L4A6NCW7 530 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 EDARADDQ8WWZ3 215 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 ZDHHC3Q9NYG2 299 aa11.85□□□□□ -0.51
TRAPPC10-211ENST00000485621 TBCELQ5QJ74 424 aa11.84□□□□□ -0.51
TRAPPC10-211ENST00000485621 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
TRAPPC10-211ENST00000485621 TPCN2Q8NHX9 752 aa11.84□□□□□ -0.51
TRAPPC10-211ENST00000485621 UCN2Q96RP3 112 aa11.84□□□□□ -0.51
TRAPPC10-211ENST00000485621 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
TRAPPC10-211ENST00000485621 GGA1Q9UJY5 639 aa11.84□□□□□ -0.51
TRAPPC10-211ENST00000485621 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
TRAPPC10-211ENST00000485621 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
TRAPPC10-211ENST00000485621 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
TRAPPC10-211ENST00000485621 ATP9BO43861 1147 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 MAPTP10636 758 aaKnown RBP11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 AMPD1P23109 780 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 TXLNAP40222 546 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 ATP1A2P50993 1020 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 SNRPNP63162 240 aaKnown RBP11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 SLC9A9Q8IVB4 645 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 KIAA1024Q9UPX6 916 aa11.82□□□□□ -0.52
TRAPPC10-211ENST00000485621 CD33P20138 364 aa11.81□□□□□ -0.52
TRAPPC10-211ENST00000485621 TNP2Q05952 138 aa11.81□□□□□ -0.52
TRAPPC10-211ENST00000485621 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
TRAPPC10-211ENST00000485621 ZDHHC1Q8WTX9 485 aa11.81□□□□□ -0.52
TRAPPC10-211ENST00000485621 CLDN10P78369 228 aa11.8□□□□□ -0.52
TRAPPC10-211ENST00000485621 SLCO4C1Q6ZQN7 724 aa11.8□□□□□ -0.52
TRAPPC10-211ENST00000485621 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
TRAPPC10-211ENST00000485621 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 NOS2P35228 1153 aa11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 EPHA4P54764 986 aa11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 FOXK2Q01167 660 aa11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 TEAD4Q15561 434 aa11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 OGFOD1Q8N543 542 aa11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
TRAPPC10-211ENST00000485621 ARAFP10398 606 aa11.78□□□□□ -0.52
TRAPPC10-211ENST00000485621 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC10-211ENST00000485621 MKL2Q9ULH7 1088 aa11.78□□□□□ -0.52
TRAPPC10-211ENST00000485621 GLMNQ92990 594 aa11.77□□□□□ -0.53
TRAPPC10-211ENST00000485621 HCN2Q9UL51 889 aa11.77□□□□□ -0.53
TRAPPC10-211ENST00000485621 SH3PXD2AQ5TCZ1 1133 aa11.76□□□□□ -0.53
TRAPPC10-211ENST00000485621 ZNF594Q96JF6 807 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC10-211ENST00000485621 NEUROD4Q9HD90 331 aa11.76□□□□□ -0.53
TRAPPC10-211ENST00000485621 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 IGHA1P01876 353 aa11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 FAM157BP0CG42 384 aa11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 EPXP11678 715 aa11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 LRRC69Q6ZNQ3 347 aa11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
TRAPPC10-211ENST00000485621 PLA2G4EQ3MJ16 856 aa11.74□□□□□ -0.53
TRAPPC10-211ENST00000485621 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
TRAPPC10-211ENST00000485621 FNBP4Q8N3X1 1017 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC10-211ENST00000485621 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
TRAPPC10-211ENST00000485621 TSPAN10Q9H1Z9 355 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC10-211ENST00000485621 EML1O00423 815 aa11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 ADH6P28332 368 aa11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 PCBP4P57723 403 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 SAMD5Q5TGI4 173 aa11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 BTBD6Q96KE9 485 aa11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 STRN4Q9NRL3 753 aa11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 TFIP11Q9UBB9 837 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-211ENST00000485621 SFI1A8K8P3 1242 aa11.72□□□□□ -0.53
TRAPPC10-211ENST00000485621 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
TRAPPC10-211ENST00000485621 TSEN2Q8NCE0 465 aaKnown RBP11.72□□□□□ -0.53
TRAPPC10-211ENST00000485621 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
TRAPPC10-211ENST00000485621 RASA1P20936 1047 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms