RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 SENP3-EIF4A1A0A087X0R7 540 aa23.75■■□□□ 1.39
NPDC1-204ENST00000485589 COL15A1P39059 1388 aa23.75■■□□□ 1.39
NPDC1-204ENST00000485589 TM4SF1P30408 202 aa23.74■■□□□ 1.39
NPDC1-204ENST00000485589 USPL1Q5W0Q7 1092 aa23.74■■□□□ 1.39
NPDC1-204ENST00000485589 ZNF526Q8TF50 670 aaPredicted RBP23.74■■□□□ 1.39
NPDC1-204ENST00000485589 PHACTR3Q96KR7 559 aa23.74■■□□□ 1.39
NPDC1-204ENST00000485589 BCS1LQ9Y276 419 aa23.74■■□□□ 1.39
NPDC1-204ENST00000485589 CACNA1SQ13698 1873 aa23.74■■□□□ 1.39
NPDC1-204ENST00000485589 POLRMTO00411 1230 aaKnown RBP23.73■■□□□ 1.39
NPDC1-204ENST00000485589 BCL2L12Q9HB09 334 aa23.73■■□□□ 1.39
NPDC1-204ENST00000485589 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
NPDC1-204ENST00000485589 RSPH6AQ9H0K4 717 aa23.72■■□□□ 1.39
NPDC1-204ENST00000485589 CEMIPQ8WUJ3 1361 aa23.71■■□□□ 1.39
NPDC1-204ENST00000485589 ZNF496Q96IT1 587 aaPredicted RBP23.7■■□□□ 1.38
NPDC1-204ENST00000485589 GNAT3A8MTJ3 354 aa23.69■■□□□ 1.38
NPDC1-204ENST00000485589 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
NPDC1-204ENST00000485589 VSIG10Q8N0Z9 540 aa23.69■■□□□ 1.38
NPDC1-204ENST00000485589 CHRNA5P30532 468 aa23.68■■□□□ 1.38
NPDC1-204ENST00000485589 PRKAR2BP31323 418 aa23.68■■□□□ 1.38
NPDC1-204ENST00000485589 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
NPDC1-204ENST00000485589 GPBP1L1Q9HC44 474 aaPredicted RBP23.68■■□□□ 1.38
NPDC1-204ENST00000485589 NARFQ9UHQ1 456 aa23.68■■□□□ 1.38
NPDC1-204ENST00000485589 HEG1Q9ULI3 1381 aa23.67■■□□□ 1.38
NPDC1-204ENST00000485589 KCNQ3O43525 872 aa23.67■■□□□ 1.38
NPDC1-204ENST00000485589 FCHSD2O94868 740 aa23.67■■□□□ 1.38
NPDC1-204ENST00000485589 NFIXQ14938 502 aa23.67■■□□□ 1.38
NPDC1-204ENST00000485589 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
NPDC1-204ENST00000485589 CANXP27824 592 aaKnown RBP23.66■■□□□ 1.38
NPDC1-204ENST00000485589 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
NPDC1-204ENST00000485589 KDM3BQ7LBC6 1761 aa23.65■■□□□ 1.38
NPDC1-204ENST00000485589 ZPR1O75312 459 aa23.65■■□□□ 1.38
NPDC1-204ENST00000485589 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
NPDC1-204ENST00000485589 KIF3CO14782 793 aa23.64■■□□□ 1.37
NPDC1-204ENST00000485589 EIF5P55010 431 aaKnown RBP23.64■■□□□ 1.37
NPDC1-204ENST00000485589 TEFQ10587 303 aa23.64■■□□□ 1.37
NPDC1-204ENST00000485589 ARHGAP27Q6ZUM4 889 aa23.64■■□□□ 1.37
NPDC1-204ENST00000485589 TIAM2Q8IVF5 1701 aa23.63■■□□□ 1.37
NPDC1-204ENST00000485589 TTC5Q8N0Z6 440 aa23.63■■□□□ 1.37
NPDC1-204ENST00000485589 PIM2Q9P1W9 311 aa23.62■■□□□ 1.37
NPDC1-204ENST00000485589 ARFGEF2Q9Y6D5 1785 aa23.62■■□□□ 1.37
NPDC1-204ENST00000485589 DICER1Q9UPY3 1922 aaKnown RBP23.61■■□□□ 1.37
NPDC1-204ENST00000485589 FER1L6Q2WGJ9 1857 aa23.61■■□□□ 1.37
NPDC1-204ENST00000485589 PRAMEF22A3QJZ6 481 aa23.6■■□□□ 1.37
NPDC1-204ENST00000485589 CFAP53Q96M91 514 aa23.6■■□□□ 1.37
NPDC1-204ENST00000485589 TNRC6CQ9HCJ0 1690 aaKnown RBP23.58■■□□□ 1.37
NPDC1-204ENST00000485589 A1BGP04217 495 aa23.58■■□□□ 1.37
NPDC1-204ENST00000485589 SERPINB2P05120 415 aa23.58■■□□□ 1.37
NPDC1-204ENST00000485589 U2AF1L5P0DN76 240 aaPredicted RBP23.58■■□□□ 1.37
NPDC1-204ENST00000485589 U2AF1Q01081 240 aaKnown RBP eCLIP23.58■■□□□ 1.37
NPDC1-204ENST00000485589 DCTN1Q14203 1278 aa23.58■■□□□ 1.37
NPDC1-204ENST00000485589 DALRD3Q5D0E6 543 aaKnown RBP23.58■■□□□ 1.37
NPDC1-204ENST00000485589 MCM10Q7L590 875 aa23.58■■□□□ 1.37
NPDC1-204ENST00000485589 SLX4Q8IY92 1834 aa23.57■■□□□ 1.36
NPDC1-204ENST00000485589 STARD3NLO95772 234 aa23.57■■□□□ 1.36
NPDC1-204ENST00000485589 TBC1D9BQ66K14 1250 aa23.57■■□□□ 1.36
NPDC1-204ENST00000485589 BTBD11A6QL63 1104 aa23.56■■□□□ 1.36
NPDC1-204ENST00000485589 PIP4K2AP48426 406 aaPredicted RBP23.56■■□□□ 1.36
NPDC1-204ENST00000485589 C9orf131Q5VYM1 1079 aa23.56■■□□□ 1.36
NPDC1-204ENST00000485589 BICDL1Q6ZP65 573 aa23.56■■□□□ 1.36
NPDC1-204ENST00000485589 FMNL2Q96PY5 1086 aa23.56■■□□□ 1.36
NPDC1-204ENST00000485589 TBC1D2BQ9UPU7 963 aa23.56■■□□□ 1.36
NPDC1-204ENST00000485589 NUP98P52948 1817 aa23.56■■□□□ 1.36
NPDC1-204ENST00000485589 PRELPP51888 382 aa23.55■■□□□ 1.36
NPDC1-204ENST00000485589 NMRK2Q9NPI5 230 aa23.55■■□□□ 1.36
NPDC1-204ENST00000485589 USP16Q9Y5T5 823 aa23.55■■□□□ 1.36
NPDC1-204ENST00000485589 NUDCQ9Y266 331 aa23.54■■□□□ 1.36
NPDC1-204ENST00000485589 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
NPDC1-204ENST00000485589 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
NPDC1-204ENST00000485589 RASSF7Q02833 373 aa23.53■■□□□ 1.36
NPDC1-204ENST00000485589 CCDC24Q8N4L8 307 aa23.53■■□□□ 1.36
NPDC1-204ENST00000485589 CAMTA2O94983 1202 aa23.52■■□□□ 1.36
NPDC1-204ENST00000485589 TEX13AQ9BXU3 409 aaPredicted RBP23.52■■□□□ 1.36
NPDC1-204ENST00000485589 WDR90Q96KV7 1748 aa23.51■■□□□ 1.35
NPDC1-204ENST00000485589 A0A087WZG4 1122 aa23.5■■□□□ 1.35
NPDC1-204ENST00000485589 HSPA6P17066 643 aa23.5■■□□□ 1.35
NPDC1-204ENST00000485589 PRR5LQ6MZQ0 368 aa23.49■■□□□ 1.35
NPDC1-204ENST00000485589 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
NPDC1-204ENST00000485589 RNF181Q9P0P0 153 aa23.49■■□□□ 1.35
NPDC1-204ENST00000485589 PLEKHF1Q96S99 279 aa23.48■■□□□ 1.35
NPDC1-204ENST00000485589 NBPF26B4DH59 902 aa23.47■■□□□ 1.35
NPDC1-204ENST00000485589 NBPF10Q6P3W6 841 aaKnown RBP23.47■■□□□ 1.35
NPDC1-204ENST00000485589 NBPF15Q8N660 670 aa23.47■■□□□ 1.35
NPDC1-204ENST00000485589 MIS18AQ9NYP9 233 aa23.47■■□□□ 1.35
NPDC1-204ENST00000485589 RTF1Q92541 710 aaKnown RBP23.46■■□□□ 1.35
NPDC1-204ENST00000485589 NFKBIEO00221 500 aa23.45■■□□□ 1.34
NPDC1-204ENST00000485589 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
NPDC1-204ENST00000485589 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
NPDC1-204ENST00000485589 TTLL6Q8N841 843 aa23.44■■□□□ 1.34
NPDC1-204ENST00000485589 SNRPA1P09661 255 aaKnown RBP23.43■■□□□ 1.34
NPDC1-204ENST00000485589 H0YIN7 160 aa23.42■■□□□ 1.34
NPDC1-204ENST00000485589 TOMM70O94826 608 aa23.42■■□□□ 1.34
NPDC1-204ENST00000485589 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
NPDC1-204ENST00000485589 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
NPDC1-204ENST00000485589 BRIP1Q9BX63 1249 aa23.41■■□□□ 1.34
NPDC1-204ENST00000485589 ZNF622Q969S3 477 aaKnown RBP eCLIP23.39■■□□□ 1.33
NPDC1-204ENST00000485589 SETDB2Q96T68 719 aa23.39■■□□□ 1.33
NPDC1-204ENST00000485589 ZNF219Q9P2Y4 722 aaPredicted RBP23.39■■□□□ 1.33
NPDC1-204ENST00000485589 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
NPDC1-204ENST00000485589 RRAGCQ9HB90 399 aa23.38■■□□□ 1.33
NPDC1-204ENST00000485589 ANKRD36CQ5JPF3 1778 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms