RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 BCORQ6W2J9 1755 aa17.94■□□□□ 0.46
UBA3-210ENST00000485424 COL11A2P13942 1736 aaPredicted RBP17.93■□□□□ 0.46
UBA3-210ENST00000485424 KIF3CO14782 793 aa17.93■□□□□ 0.46
UBA3-210ENST00000485424 DPEP1P16444 411 aa17.93■□□□□ 0.46
UBA3-210ENST00000485424 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
UBA3-210ENST00000485424 ARFGEF2Q9Y6D5 1785 aa17.92■□□□□ 0.46
UBA3-210ENST00000485424 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
UBA3-210ENST00000485424 SRP68Q9UHB9 627 aaKnown RBP17.92■□□□□ 0.46
UBA3-210ENST00000485424 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
UBA3-210ENST00000485424 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
UBA3-210ENST00000485424 DDR1Q08345 913 aa17.9■□□□□ 0.46
UBA3-210ENST00000485424 FKBP8Q14318 412 aa17.9■□□□□ 0.46
UBA3-210ENST00000485424 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
UBA3-210ENST00000485424 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
UBA3-210ENST00000485424 FCHSD2O94868 740 aa17.89■□□□□ 0.45
UBA3-210ENST00000485424 HMOX1P09601 288 aa17.89■□□□□ 0.45
UBA3-210ENST00000485424 KCNA3P22001 575 aa17.89■□□□□ 0.45
UBA3-210ENST00000485424 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
UBA3-210ENST00000485424 SLC52A2Q9HAB3 445 aa17.89■□□□□ 0.45
UBA3-210ENST00000485424 DLG5Q8TDM6 1919 aa17.88■□□□□ 0.45
UBA3-210ENST00000485424 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
UBA3-210ENST00000485424 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
UBA3-210ENST00000485424 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
UBA3-210ENST00000485424 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
UBA3-210ENST00000485424 PCNTO95613 3336 aa17.87■□□□□ 0.45
UBA3-210ENST00000485424 COL15A1P39059 1388 aa17.86■□□□□ 0.45
UBA3-210ENST00000485424 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
UBA3-210ENST00000485424 PER1O15534 1290 aaPredicted RBP17.85■□□□□ 0.45
UBA3-210ENST00000485424 RNMTO43148 476 aaKnown RBP17.85■□□□□ 0.45
UBA3-210ENST00000485424 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
UBA3-210ENST00000485424 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
UBA3-210ENST00000485424 SLC39A6Q13433 755 aa17.84■□□□□ 0.45
UBA3-210ENST00000485424 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
UBA3-210ENST00000485424 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
UBA3-210ENST00000485424 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.44
UBA3-210ENST00000485424 TM4SF1P30408 202 aa17.83■□□□□ 0.44
UBA3-210ENST00000485424 CHRNA5P30532 468 aa17.83■□□□□ 0.44
UBA3-210ENST00000485424 C9orf131Q5VYM1 1079 aa17.83■□□□□ 0.44
UBA3-210ENST00000485424 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
UBA3-210ENST00000485424 LAMB4A4D0S4 1761 aa17.82■□□□□ 0.44
UBA3-210ENST00000485424 ZPR1O75312 459 aa17.82■□□□□ 0.44
UBA3-210ENST00000485424 TOMM70O94826 608 aa17.82■□□□□ 0.44
UBA3-210ENST00000485424 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
UBA3-210ENST00000485424 DALRD3Q5D0E6 543 aaKnown RBP17.82■□□□□ 0.44
UBA3-210ENST00000485424 IFFO2Q5TF58 517 aa17.82■□□□□ 0.44
UBA3-210ENST00000485424 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
UBA3-210ENST00000485424 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
UBA3-210ENST00000485424 SLX4Q8IY92 1834 aa17.8■□□□□ 0.44
UBA3-210ENST00000485424 NARFQ9UHQ1 456 aa17.8■□□□□ 0.44
UBA3-210ENST00000485424 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
UBA3-210ENST00000485424 APLP1P51693 650 aa17.79■□□□□ 0.44
UBA3-210ENST00000485424 NFIXQ14938 502 aa17.79■□□□□ 0.44
UBA3-210ENST00000485424 VSIG10Q8N0Z9 540 aa17.79■□□□□ 0.44
UBA3-210ENST00000485424 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
UBA3-210ENST00000485424 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
UBA3-210ENST00000485424 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
UBA3-210ENST00000485424 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
UBA3-210ENST00000485424 TEFQ10587 303 aa17.77■□□□□ 0.44
UBA3-210ENST00000485424 NUP98P52948 1817 aa17.77■□□□□ 0.43
UBA3-210ENST00000485424 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
UBA3-210ENST00000485424 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
UBA3-210ENST00000485424 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
UBA3-210ENST00000485424 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
UBA3-210ENST00000485424 RASSF7Q02833 373 aa17.75■□□□□ 0.43
UBA3-210ENST00000485424 KDM3BQ7LBC6 1761 aa17.75■□□□□ 0.43
UBA3-210ENST00000485424 CANXP27824 592 aaKnown RBP17.74■□□□□ 0.43
UBA3-210ENST00000485424 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
UBA3-210ENST00000485424 SERPINB2P05120 415 aa17.73■□□□□ 0.43
UBA3-210ENST00000485424 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
UBA3-210ENST00000485424 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
UBA3-210ENST00000485424 DNAJC5GQ8N7S2 189 aa17.73■□□□□ 0.43
UBA3-210ENST00000485424 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
UBA3-210ENST00000485424 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
UBA3-210ENST00000485424 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
UBA3-210ENST00000485424 SCN4AP35499 1836 aa17.71■□□□□ 0.43
UBA3-210ENST00000485424 STARD3NLO95772 234 aa17.71■□□□□ 0.43
UBA3-210ENST00000485424 PRELPP51888 382 aa17.71■□□□□ 0.43
UBA3-210ENST00000485424 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
UBA3-210ENST00000485424 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
UBA3-210ENST00000485424 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
UBA3-210ENST00000485424 FSTL1Q12841 308 aa17.7■□□□□ 0.42
UBA3-210ENST00000485424 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
UBA3-210ENST00000485424 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
UBA3-210ENST00000485424 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
UBA3-210ENST00000485424 RRAGCQ9HB90 399 aa17.7■□□□□ 0.42
UBA3-210ENST00000485424 A0A087WZG4 1122 aa17.69■□□□□ 0.42
UBA3-210ENST00000485424 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
UBA3-210ENST00000485424 LMNB1P20700 586 aa17.69■□□□□ 0.42
UBA3-210ENST00000485424 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
UBA3-210ENST00000485424 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
UBA3-210ENST00000485424 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
UBA3-210ENST00000485424 NEFMP07197 916 aa17.68■□□□□ 0.42
UBA3-210ENST00000485424 HTRA3P83110 453 aa17.68■□□□□ 0.42
UBA3-210ENST00000485424 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
UBA3-210ENST00000485424 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
UBA3-210ENST00000485424 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
UBA3-210ENST00000485424 H0YIN7 160 aa17.67■□□□□ 0.42
UBA3-210ENST00000485424 NFKBIEO00221 500 aa17.67■□□□□ 0.42
UBA3-210ENST00000485424 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
UBA3-210ENST00000485424 IL6STP40189 918 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms