RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 CABP1Q9NZU7 370 aa7.52□□□□□ -1.21
VPS50-217ENST00000485140 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
VPS50-217ENST00000485140 TEAD4Q15561 434 aa7.51□□□□□ -1.21
VPS50-217ENST00000485140 FAM182BQ5T319 152 aa7.51□□□□□ -1.21
VPS50-217ENST00000485140 TMEM151AQ8N4L1 468 aa7.51□□□□□ -1.21
VPS50-217ENST00000485140 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
VPS50-217ENST00000485140 NEDD1Q8NHV4 660 aa7.51□□□□□ -1.21
VPS50-217ENST00000485140 AIDAQ96BJ3 306 aa7.51□□□□□ -1.21
VPS50-217ENST00000485140 DNAAF2Q9NVR5 837 aaKnown RBP7.51□□□□□ -1.21
VPS50-217ENST00000485140 SERTAD1Q9UHV2 236 aa7.51□□□□□ -1.21
VPS50-217ENST00000485140 GPR25O00155 361 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 BMP4P12644 408 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 FGFR3P22607 806 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 GSK3AP49840 483 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
VPS50-217ENST00000485140 SIX5Q8N196 739 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 FNBP4Q8N3X1 1017 aaPredicted RBP7.5□□□□□ -1.21
VPS50-217ENST00000485140 GLMNQ92990 594 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 ZNF358Q9NW07 568 aa7.5□□□□□ -1.21
VPS50-217ENST00000485140 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
VPS50-217ENST00000485140 OIP5O43482 229 aa7.49□□□□□ -1.21
VPS50-217ENST00000485140 FAM157BP0CG42 384 aa7.49□□□□□ -1.21
VPS50-217ENST00000485140 PSMA6P60900 246 aaKnown RBP7.49□□□□□ -1.21
VPS50-217ENST00000485140 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
VPS50-217ENST00000485140 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
VPS50-217ENST00000485140 CALR3Q96L12 384 aaKnown RBP7.49□□□□□ -1.21
VPS50-217ENST00000485140 ANKIB1Q9P2G1 1089 aa7.49□□□□□ -1.21
VPS50-217ENST00000485140 MKRN1Q9UHC7 482 aaKnown RBP7.49□□□□□ -1.21
VPS50-217ENST00000485140 ATXN7O15265 892 aaPredicted RBP7.48□□□□□ -1.21
VPS50-217ENST00000485140 IGHA1P01876 353 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 ARAFP10398 606 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 ATP4AP20648 1035 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 HIRAP54198 1017 aaPredicted RBP7.48□□□□□ -1.21
VPS50-217ENST00000485140 C1orf53Q5VUE5 145 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
VPS50-217ENST00000485140 SLCO4C1Q6ZQN7 724 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 OGFOD1Q8N543 542 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 NDFIP2Q9NV92 336 aa7.48□□□□□ -1.21
VPS50-217ENST00000485140 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
VPS50-217ENST00000485140 A0A1W2PNR3 127 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 SERTM1A2A2V5 107 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 POM121CA8CG34 1229 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 GDF11O95390 407 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 RASSF7Q02833 373 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 ZNF295-AS1Q8N0V1 137 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 ACDQ96AP0 544 aa7.47□□□□□ -1.21
VPS50-217ENST00000485140 ZCCHC2Q9C0B9 1178 aaKnown RBP7.47□□□□□ -1.21
VPS50-217ENST00000485140 NOS2P35228 1153 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 EPHA4P54764 986 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 NEUROD1Q13562 356 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
VPS50-217ENST00000485140 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 ADAMTS19Q8TE59 1207 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 WHAMMQ8TF30 809 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 KLRG1Q96E93 195 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.22
VPS50-217ENST00000485140 BNIP3LO60238 219 aa7.45□□□□□ -1.22
VPS50-217ENST00000485140 ADH6P28332 368 aa7.45□□□□□ -1.22
VPS50-217ENST00000485140 SEC13P55735 322 aa7.45□□□□□ -1.22
VPS50-217ENST00000485140 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
VPS50-217ENST00000485140 L3MBTL2Q969R5 705 aa7.45□□□□□ -1.22
VPS50-217ENST00000485140 ABHD17AQ96GS6 310 aa7.45□□□□□ -1.22
VPS50-217ENST00000485140 MKL2Q9ULH7 1088 aa7.45□□□□□ -1.22
VPS50-217ENST00000485140 MAFBQ9Y5Q3 323 aaPredicted RBP7.45□□□□□ -1.22
VPS50-217ENST00000485140 RASA1P20936 1047 aa7.44□□□□□ -1.22
VPS50-217ENST00000485140 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
VPS50-217ENST00000485140 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
VPS50-217ENST00000485140 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
VPS50-217ENST00000485140 EFCC1Q9HA90 598 aa7.44□□□□□ -1.22
VPS50-217ENST00000485140 FAM196BA6NMK8 535 aa7.43□□□□□ -1.22
VPS50-217ENST00000485140 EML1O00423 815 aa7.43□□□□□ -1.22
VPS50-217ENST00000485140 STAU1O95793 577 aaKnown RBP7.43□□□□□ -1.22
VPS50-217ENST00000485140 CLDN10P78369 228 aa7.43□□□□□ -1.22
VPS50-217ENST00000485140 PPP1R12CQ9BZL4 782 aa7.43□□□□□ -1.22
VPS50-217ENST00000485140 TFIP11Q9UBB9 837 aaKnown RBP7.43□□□□□ -1.22
VPS50-217ENST00000485140 PRR12Q9ULL5 1215 aa7.43□□□□□ -1.22
VPS50-217ENST00000485140 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
VPS50-217ENST00000485140 THBS1P07996 1170 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 MAPTP10636 758 aaKnown RBP7.42□□□□□ -1.22
VPS50-217ENST00000485140 TNP2Q05952 138 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 RHPN1Q8TCX5 695 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 VRTNQ9H8Y1 702 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS50-217ENST00000485140 NOP53Q9NZM5 478 aaKnown RBP7.42□□□□□ -1.22
VPS50-217ENST00000485140 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
VPS50-217ENST00000485140 KHNYNO15037 678 aaKnown RBP7.41□□□□□ -1.22
VPS50-217ENST00000485140 IRS1P35568 1242 aa7.41□□□□□ -1.22
VPS50-217ENST00000485140 AMPD1P23109 780 aa7.4□□□□□ -1.22
VPS50-217ENST00000485140 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
VPS50-217ENST00000485140 TNS4Q8IZW8 715 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms