RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 PDE3AQ14432 1141 aa22.28■■□□□ 1.16
CCDC78-214ENST00000485091 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
CCDC78-214ENST00000485091 CHMP4AQ9BY43 222 aa22.28■■□□□ 1.16
CCDC78-214ENST00000485091 COG6Q9Y2V7 657 aa22.28■■□□□ 1.16
CCDC78-214ENST00000485091 UBR2Q8IWV8 1755 aa22.28■■□□□ 1.16
CCDC78-214ENST00000485091 PTF1AQ7RTS3 328 aa22.27■■□□□ 1.16
CCDC78-214ENST00000485091 PHAXQ9H814 394 aaKnown RBP22.27■■□□□ 1.16
CCDC78-214ENST00000485091 BRWD3Q6RI45 1802 aa22.26■■□□□ 1.15
CCDC78-214ENST00000485091 MS4A1P11836 297 aa22.26■■□□□ 1.15
CCDC78-214ENST00000485091 PIP4K2AP48426 406 aaPredicted RBP22.26■■□□□ 1.15
CCDC78-214ENST00000485091 ARHGAP45Q92619 1136 aa22.26■■□□□ 1.15
CCDC78-214ENST00000485091 DBF4Q9UBU7 674 aaPredicted RBP22.26■■□□□ 1.15
CCDC78-214ENST00000485091 MYL6BP14649 208 aa22.25■■□□□ 1.15
CCDC78-214ENST00000485091 FLIIQ13045 1269 aa22.25■■□□□ 1.15
CCDC78-214ENST00000485091 PROSER3Q2NL68 480 aa22.25■■□□□ 1.15
CCDC78-214ENST00000485091 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
CCDC78-214ENST00000485091 PTPRCP08575 1304 aa22.23■■□□□ 1.15
CCDC78-214ENST00000485091 FKBP5Q13451 457 aaPredicted RBP22.23■■□□□ 1.15
CCDC78-214ENST00000485091 DNAJC10Q8IXB1 793 aa22.23■■□□□ 1.15
CCDC78-214ENST00000485091 TMEM57Q8N5G2 664 aa22.23■■□□□ 1.15
CCDC78-214ENST00000485091 SLC4A9Q96Q91 983 aa22.23■■□□□ 1.15
CCDC78-214ENST00000485091 PDIA6Q15084 440 aa22.22■■□□□ 1.15
CCDC78-214ENST00000485091 ERICH6BQ5W0A0 696 aa22.22■■□□□ 1.15
CCDC78-214ENST00000485091 ITPRIPQ8IWB1 547 aa22.22■■□□□ 1.15
CCDC78-214ENST00000485091 VSIG10Q8N0Z9 540 aa22.22■■□□□ 1.15
CCDC78-214ENST00000485091 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
CCDC78-214ENST00000485091 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
CCDC78-214ENST00000485091 F6X3S4 739 aa22.21■■□□□ 1.15
CCDC78-214ENST00000485091 A1BGP04217 495 aa22.21■■□□□ 1.15
CCDC78-214ENST00000485091 AIMP1Q12904 312 aaKnown RBP22.2■■□□□ 1.14
CCDC78-214ENST00000485091 SMARCC1Q92922 1105 aaPredicted RBP22.2■■□□□ 1.14
CCDC78-214ENST00000485091 LAMB4A4D0S4 1761 aa22.2■■□□□ 1.14
CCDC78-214ENST00000485091 MVPQ14764 893 aaKnown RBP22.2■■□□□ 1.14
CCDC78-214ENST00000485091 FAM196AQ6ZSG2 479 aa22.2■■□□□ 1.14
CCDC78-214ENST00000485091 HYPKQ9NX55 129 aa22.2■■□□□ 1.14
CCDC78-214ENST00000485091 NHSQ6T4R5 1651 aa22.2■■□□□ 1.14
CCDC78-214ENST00000485091 ATP6V1AP38606 617 aa22.19■■□□□ 1.14
CCDC78-214ENST00000485091 SLC4A10Q6U841 1118 aa22.19■■□□□ 1.14
CCDC78-214ENST00000485091 TEX13AQ9BXU3 409 aaPredicted RBP22.19■■□□□ 1.14
CCDC78-214ENST00000485091 ABCC4O15439 1325 aa22.18■■□□□ 1.14
CCDC78-214ENST00000485091 LOC102724428A0A0B4J2F2 783 aa22.18■■□□□ 1.14
CCDC78-214ENST00000485091 SIK1P57059 783 aa22.18■■□□□ 1.14
CCDC78-214ENST00000485091 PPP4R2Q9NY27 417 aa22.17■■□□□ 1.14
CCDC78-214ENST00000485091 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
CCDC78-214ENST00000485091 SBF2Q86WG5 1849 aa22.17■■□□□ 1.14
CCDC78-214ENST00000485091 STARD3NLO95772 234 aa22.17■■□□□ 1.14
CCDC78-214ENST00000485091 UPF1Q92900 1129 aaKnown RBP eCLIP22.17■■□□□ 1.14
CCDC78-214ENST00000485091 BTAF1O14981 1849 aa22.16■■□□□ 1.14
CCDC78-214ENST00000485091 NBPF26B4DH59 902 aa22.16■■□□□ 1.14
CCDC78-214ENST00000485091 NBPF14Q5TI25 921 aa22.16■■□□□ 1.14
CCDC78-214ENST00000485091 NBPF10Q6P3W6 841 aaKnown RBP22.16■■□□□ 1.14
CCDC78-214ENST00000485091 NBPF15Q8N660 670 aa22.16■■□□□ 1.14
CCDC78-214ENST00000485091 TRIM37O94972 964 aa22.15■■□□□ 1.14
CCDC78-214ENST00000485091 XAGE3Q8WTP9 111 aa22.15■■□□□ 1.14
CCDC78-214ENST00000485091 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
CCDC78-214ENST00000485091 ZNF330Q9Y3S2 320 aaPredicted RBP22.15■■□□□ 1.14
CCDC78-214ENST00000485091 CYP19A1P11511 503 aaPredicted RBP22.14■■□□□ 1.14
CCDC78-214ENST00000485091 KCNQ4P56696 695 aa22.14■■□□□ 1.14
CCDC78-214ENST00000485091 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.14
CCDC78-214ENST00000485091 COPS6Q7L5N1 327 aa22.14■■□□□ 1.14
CCDC78-214ENST00000485091 PI4KAP2A4QPH2 592 aa22.14■■□□□ 1.13
CCDC78-214ENST00000485091 ITPK1Q13572 414 aa22.14■■□□□ 1.13
CCDC78-214ENST00000485091 PI4KAP1Q8N8J0 262 aa22.14■■□□□ 1.13
CCDC78-214ENST00000485091 DDX19BQ9UMR2 479 aa22.14■■□□□ 1.13
CCDC78-214ENST00000485091 ERBB4Q15303 1308 aa22.13■■□□□ 1.13
CCDC78-214ENST00000485091 TJP1Q07157 1748 aa22.13■■□□□ 1.13
CCDC78-214ENST00000485091 LRP10Q7Z4F1 713 aa22.13■■□□□ 1.13
CCDC78-214ENST00000485091 DDX58O95786 925 aaKnown RBP22.11■■□□□ 1.13
CCDC78-214ENST00000485091 INTS3Q68E01 1043 aaKnown RBP22.11■■□□□ 1.13
CCDC78-214ENST00000485091 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
CCDC78-214ENST00000485091 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
CCDC78-214ENST00000485091 MAP3K2Q9Y2U5 619 aa22.11■■□□□ 1.13
CCDC78-214ENST00000485091 ADCY9O60503 1353 aa22.1■■□□□ 1.13
CCDC78-214ENST00000485091 KSR2Q6VAB6 950 aa22.1■■□□□ 1.13
CCDC78-214ENST00000485091 RIC3Q7Z5B4 369 aa22.1■■□□□ 1.13
CCDC78-214ENST00000485091 ZBTB1Q9Y2K1 713 aa22.1■■□□□ 1.13
CCDC78-214ENST00000485091 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
CCDC78-214ENST00000485091 ARXQ96QS3 562 aa22.09■■□□□ 1.13
CCDC78-214ENST00000485091 TTLL7Q6ZT98 887 aa22.09■■□□□ 1.13
CCDC78-214ENST00000485091 CCNL1Q9UK58 526 aaPredicted RBP22.09■■□□□ 1.13
CCDC78-214ENST00000485091 ZBTB7BO15156 539 aaPredicted RBP22.08■■□□□ 1.12
CCDC78-214ENST00000485091 CRKLP46109 303 aaKnown RBP22.08■■□□□ 1.12
CCDC78-214ENST00000485091 ANKRD13DQ6ZTN6 518 aa22.07■■□□□ 1.12
CCDC78-214ENST00000485091 LINC00116Q8NCU8 138 aa22.06■■□□□ 1.12
CCDC78-214ENST00000485091 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
CCDC78-214ENST00000485091 INTS5Q6P9B9 1019 aaKnown RBP22.06■■□□□ 1.12
CCDC78-214ENST00000485091 SRCIN1Q9C0H9 1055 aa22.06■■□□□ 1.12
CCDC78-214ENST00000485091 ZBTB3Q9H5J0 574 aa22.05■■□□□ 1.12
CCDC78-214ENST00000485091 C1orf115Q9H7X2 142 aa22.05■■□□□ 1.12
CCDC78-214ENST00000485091 ZBTB40Q9NUA8 1239 aa22.05■■□□□ 1.12
CCDC78-214ENST00000485091 BEND3Q5T5X7 828 aa22.04■■□□□ 1.12
CCDC78-214ENST00000485091 PXDNLA1KZ92 1463 aa22.04■■□□□ 1.12
CCDC78-214ENST00000485091 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
CCDC78-214ENST00000485091 PLBD2Q8NHP8 589 aa22.03■■□□□ 1.12
CCDC78-214ENST00000485091 MEIS3Q99687 375 aa22.03■■□□□ 1.12
CCDC78-214ENST00000485091 MYD88Q99836 296 aa22.03■■□□□ 1.12
CCDC78-214ENST00000485091 CHMP4BQ9H444 224 aaKnown RBP22.03■■□□□ 1.12
CCDC78-214ENST00000485091 PCDHB15Q9Y5E8 787 aa22.03■■□□□ 1.12
CCDC78-214ENST00000485091 APBA3O96018 575 aa22.02■■□□□ 1.12
CCDC78-214ENST00000485091 IL6STP40189 918 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms