RNA–Protein interactions for RNA: ENST00000484910.1

RD3-202, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

TSL 1 (best)

Gene RD3, Length 3,070 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-202ENST00000484910 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
RD3-202ENST00000484910 TPM2P07951 284 aa13.91□□□□□ -0.18
RD3-202ENST00000484910 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
RD3-202ENST00000484910 MPNDQ8N594 471 aa13.91□□□□□ -0.18
RD3-202ENST00000484910 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
RD3-202ENST00000484910 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 ARHGEF25Q86VW2 580 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 PTPRCP08575 1304 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 KIAA0232Q92628 1395 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 PI4KAP2A4QPH2 592 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 PTMAP06454 111 aaKnown RBP13.9□□□□□ -0.18
RD3-202ENST00000484910 PI4KAP1Q8N8J0 262 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 GPT2Q8TD30 523 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
RD3-202ENST00000484910 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
RD3-202ENST00000484910 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.19
RD3-202ENST00000484910 TMEM94Q12767 1356 aa13.9□□□□□ -0.19
RD3-202ENST00000484910 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
RD3-202ENST00000484910 ERC2O15083 957 aa13.89□□□□□ -0.19
RD3-202ENST00000484910 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
RD3-202ENST00000484910 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
RD3-202ENST00000484910 GNAI2P04899 355 aa13.89□□□□□ -0.19
RD3-202ENST00000484910 MYL6BP14649 208 aa13.89□□□□□ -0.19
RD3-202ENST00000484910 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
RD3-202ENST00000484910 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
RD3-202ENST00000484910 ZNF445P59923 1031 aa13.88□□□□□ -0.19
RD3-202ENST00000484910 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
RD3-202ENST00000484910 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
RD3-202ENST00000484910 ANO2Q9NQ90 1003 aa13.88□□□□□ -0.19
RD3-202ENST00000484910 NBPF7P0C2Y1 421 aaPredicted RBP13.88□□□□□ -0.19
RD3-202ENST00000484910 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
RD3-202ENST00000484910 RGPD1P0DJD0 1748 aa13.87□□□□□ -0.19
RD3-202ENST00000484910 EIF4A1P60842 406 aaKnown RBP13.87□□□□□ -0.19
RD3-202ENST00000484910 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
RD3-202ENST00000484910 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
RD3-202ENST00000484910 ATP10DQ9P241 1426 aa13.87□□□□□ -0.19
RD3-202ENST00000484910 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
RD3-202ENST00000484910 CCT4P50991 539 aaKnown RBP13.87□□□□□ -0.19
RD3-202ENST00000484910 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
RD3-202ENST00000484910 UBTFL1P0CB47 393 aaPredicted RBP13.87□□□□□ -0.19
RD3-202ENST00000484910 HMMRO75330 724 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 OFD1O75665 1012 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
RD3-202ENST00000484910 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 UPF3BQ9BZI7 483 aaKnown RBP13.86□□□□□ -0.19
RD3-202ENST00000484910 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 PXDNQ92626 1479 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 RNMTO43148 476 aaKnown RBP13.86□□□□□ -0.19
RD3-202ENST00000484910 CLEC17AQ6ZS10 378 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
RD3-202ENST00000484910 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
RD3-202ENST00000484910 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
RD3-202ENST00000484910 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
RD3-202ENST00000484910 LTN1O94822 1766 aa13.85□□□□□ -0.19
RD3-202ENST00000484910 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
RD3-202ENST00000484910 DNTTIP2Q5QJE6 756 aaKnown RBP13.85□□□□□ -0.19
RD3-202ENST00000484910 IBTKQ9P2D0 1353 aaPredicted RBP13.85□□□□□ -0.19
RD3-202ENST00000484910 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
RD3-202ENST00000484910 PDE1AP54750 535 aa13.84□□□□□ -0.19
RD3-202ENST00000484910 AKAP4Q5JQC9 854 aa13.84□□□□□ -0.19
RD3-202ENST00000484910 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
RD3-202ENST00000484910 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
RD3-202ENST00000484910 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 HTATSF1O43719 755 aaKnown RBP13.83□□□□□ -0.2
RD3-202ENST00000484910 UQCRHP07919 91 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 OS9Q13438 667 aaPredicted RBP13.83□□□□□ -0.2
RD3-202ENST00000484910 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 SRCIN1Q9C0H9 1055 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 MCCP23508 829 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 LRSAM1Q6UWE0 723 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 MAP3K2Q9Y2U5 619 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.2
RD3-202ENST00000484910 MARF1Q9Y4F3 1742 aaKnown RBP13.82□□□□□ -0.2
RD3-202ENST00000484910 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
RD3-202ENST00000484910 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
RD3-202ENST00000484910 PALD1Q9ULE6 856 aa13.82□□□□□ -0.2
RD3-202ENST00000484910 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
RD3-202ENST00000484910 ZNF330Q9Y3S2 320 aaPredicted RBP13.82□□□□□ -0.2
RD3-202ENST00000484910 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
RD3-202ENST00000484910 ERBB3P21860 1342 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 DTNBO60941 627 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 GNAI3P08754 354 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
RD3-202ENST00000484910 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
RD3-202ENST00000484910 A0A0G2JS52 829 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 PRDM4Q9UKN5 801 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 ADAMTSL3P82987 1691 aa13.81□□□□□ -0.2
RD3-202ENST00000484910 SIL1Q9H173 461 aa13.8□□□□□ -0.2
RD3-202ENST00000484910 ZKSCAN5Q9Y2L8 839 aa13.8□□□□□ -0.2
RD3-202ENST00000484910 NFAT5O94916 1531 aa13.8□□□□□ -0.2
RD3-202ENST00000484910 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
RD3-202ENST00000484910 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
RD3-202ENST00000484910 MBD3O95983 291 aa13.79□□□□□ -0.2
RD3-202ENST00000484910 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms