RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
SNX5-212ENST00000484809 GYS1P13807 737 aa18.27■□□□□ 0.52
SNX5-212ENST00000484809 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
SNX5-212ENST00000484809 KIF13BQ9NQT8 1826 aa18.27■□□□□ 0.51
SNX5-212ENST00000484809 KCNQ3O43525 872 aa18.26■□□□□ 0.51
SNX5-212ENST00000484809 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
SNX5-212ENST00000484809 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
SNX5-212ENST00000484809 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
SNX5-212ENST00000484809 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
SNX5-212ENST00000484809 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
SNX5-212ENST00000484809 ZBTB1Q9Y2K1 713 aa18.25■□□□□ 0.51
SNX5-212ENST00000484809 CD2APQ9Y5K6 639 aa18.25■□□□□ 0.51
SNX5-212ENST00000484809 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
SNX5-212ENST00000484809 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
SNX5-212ENST00000484809 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
SNX5-212ENST00000484809 STARD3NLO95772 234 aa18.24■□□□□ 0.51
SNX5-212ENST00000484809 MMP10P09238 476 aa18.24■□□□□ 0.51
SNX5-212ENST00000484809 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
SNX5-212ENST00000484809 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
SNX5-212ENST00000484809 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
SNX5-212ENST00000484809 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
SNX5-212ENST00000484809 UTRNP46939 3433 aa18.23■□□□□ 0.51
SNX5-212ENST00000484809 GOLGB1Q14789 3259 aaKnown RBP18.23■□□□□ 0.51
SNX5-212ENST00000484809 COL15A1P39059 1388 aa18.22■□□□□ 0.51
SNX5-212ENST00000484809 CANXP27824 592 aaKnown RBP18.21■□□□□ 0.51
SNX5-212ENST00000484809 FKBP8Q14318 412 aa18.21■□□□□ 0.51
SNX5-212ENST00000484809 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
SNX5-212ENST00000484809 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
SNX5-212ENST00000484809 ZPR1O75312 459 aa18.2■□□□□ 0.5
SNX5-212ENST00000484809 EIF5P55010 431 aaKnown RBP18.2■□□□□ 0.5
SNX5-212ENST00000484809 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNX5-212ENST00000484809 GPR162Q16538 588 aa18.2■□□□□ 0.5
SNX5-212ENST00000484809 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
SNX5-212ENST00000484809 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
SNX5-212ENST00000484809 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
SNX5-212ENST00000484809 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
SNX5-212ENST00000484809 RIPK4P57078 832 aa18.19■□□□□ 0.5
SNX5-212ENST00000484809 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
SNX5-212ENST00000484809 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
SNX5-212ENST00000484809 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
SNX5-212ENST00000484809 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
SNX5-212ENST00000484809 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
SNX5-212ENST00000484809 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
SNX5-212ENST00000484809 A1BGP04217 495 aa18.18■□□□□ 0.5
SNX5-212ENST00000484809 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
SNX5-212ENST00000484809 PARP3Q9Y6F1 533 aa18.18■□□□□ 0.5
SNX5-212ENST00000484809 PRAMEF22A3QJZ6 481 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 ZBTB22O15209 634 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 TM4SF1P30408 202 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
SNX5-212ENST00000484809 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
SNX5-212ENST00000484809 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
SNX5-212ENST00000484809 A0A087WZG4 1122 aa18.16■□□□□ 0.5
SNX5-212ENST00000484809 YBX3P16989 372 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX5-212ENST00000484809 YY1P25490 414 aa18.16■□□□□ 0.5
SNX5-212ENST00000484809 BRCA1P38398 1863 aaKnown RBP18.16■□□□□ 0.5
SNX5-212ENST00000484809 BCL2L12Q9HB09 334 aa18.16■□□□□ 0.5
SNX5-212ENST00000484809 NRXN2Q9P2S2 1712 aa18.16■□□□□ 0.5
SNX5-212ENST00000484809 BCORQ6W2J9 1755 aa18.15■□□□□ 0.5
SNX5-212ENST00000484809 DDR1Q08345 913 aa18.15■□□□□ 0.5
SNX5-212ENST00000484809 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
SNX5-212ENST00000484809 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
SNX5-212ENST00000484809 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
SNX5-212ENST00000484809 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
SNX5-212ENST00000484809 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
SNX5-212ENST00000484809 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
SNX5-212ENST00000484809 TGFB2P61812 414 aa18.13■□□□□ 0.49
SNX5-212ENST00000484809 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
SNX5-212ENST00000484809 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
SNX5-212ENST00000484809 NFIXQ14938 502 aa18.12■□□□□ 0.49
SNX5-212ENST00000484809 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
SNX5-212ENST00000484809 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
SNX5-212ENST00000484809 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
SNX5-212ENST00000484809 PIP4K2AP48426 406 aaPredicted RBP18.11■□□□□ 0.49
SNX5-212ENST00000484809 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
SNX5-212ENST00000484809 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
SNX5-212ENST00000484809 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
SNX5-212ENST00000484809 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
SNX5-212ENST00000484809 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
SNX5-212ENST00000484809 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
SNX5-212ENST00000484809 BABAM1Q9NWV8 329 aa18.1■□□□□ 0.49
SNX5-212ENST00000484809 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
SNX5-212ENST00000484809 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
SNX5-212ENST00000484809 CAMTA2O94983 1202 aa18.09■□□□□ 0.49
SNX5-212ENST00000484809 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
SNX5-212ENST00000484809 A0A0G2JLW4 131 aa18.08■□□□□ 0.49
SNX5-212ENST00000484809 TBC1D9BQ66K14 1250 aa18.08■□□□□ 0.49
SNX5-212ENST00000484809 ANP32CO43423 234 aa18.07■□□□□ 0.48
SNX5-212ENST00000484809 SERPINB2P05120 415 aa18.07■□□□□ 0.48
SNX5-212ENST00000484809 DPEP1P16444 411 aa18.07■□□□□ 0.48
SNX5-212ENST00000484809 WWC3Q9ULE0 1092 aa18.07■□□□□ 0.48
SNX5-212ENST00000484809 NUP98P52948 1817 aa18.07■□□□□ 0.48
SNX5-212ENST00000484809 ANKRD31Q8N7Z5 1873 aa18.07■□□□□ 0.48
SNX5-212ENST00000484809 KCNA3P22001 575 aa18.06■□□□□ 0.48
SNX5-212ENST00000484809 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
SNX5-212ENST00000484809 DLEC1Q9Y238 1755 aa18.06■□□□□ 0.48
SNX5-212ENST00000484809 CHL1O00533 1208 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms