RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 CAPN15O75808 1086 aa17.53■□□□□ 0.4
DNMT3A-213ENST00000484184 NFIXQ14938 502 aa17.53■□□□□ 0.4
DNMT3A-213ENST00000484184 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
DNMT3A-213ENST00000484184 GLTPD2A6NH11 291 aa17.52■□□□□ 0.4
DNMT3A-213ENST00000484184 CYP19A1P11511 503 aaPredicted RBP17.52■□□□□ 0.4
DNMT3A-213ENST00000484184 LMNB1P20700 586 aa17.52■□□□□ 0.4
DNMT3A-213ENST00000484184 BCL2L12Q9HB09 334 aa17.52■□□□□ 0.4
DNMT3A-213ENST00000484184 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
DNMT3A-213ENST00000484184 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.39
DNMT3A-213ENST00000484184 POTECB2RU33 542 aa17.51■□□□□ 0.39
DNMT3A-213ENST00000484184 ZPR1O75312 459 aa17.51■□□□□ 0.39
DNMT3A-213ENST00000484184 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
DNMT3A-213ENST00000484184 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
DNMT3A-213ENST00000484184 NFKBIEO00221 500 aa17.5■□□□□ 0.39
DNMT3A-213ENST00000484184 NARFQ9UHQ1 456 aa17.5■□□□□ 0.39
DNMT3A-213ENST00000484184 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 IL13P35225 146 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 PANK3Q9H999 370 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 SLC52A2Q9HAB3 445 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 MRC1P22897 1456 aa17.49■□□□□ 0.39
DNMT3A-213ENST00000484184 SERPINB2P05120 415 aa17.48■□□□□ 0.39
DNMT3A-213ENST00000484184 TTLL6Q8N841 843 aa17.48■□□□□ 0.39
DNMT3A-213ENST00000484184 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
DNMT3A-213ENST00000484184 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
DNMT3A-213ENST00000484184 COL15A1P39059 1388 aa17.48■□□□□ 0.39
DNMT3A-213ENST00000484184 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
DNMT3A-213ENST00000484184 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
DNMT3A-213ENST00000484184 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-213ENST00000484184 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-213ENST00000484184 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
DNMT3A-213ENST00000484184 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
DNMT3A-213ENST00000484184 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
DNMT3A-213ENST00000484184 DICER1Q9UPY3 1922 aaKnown RBP17.43■□□□□ 0.38
DNMT3A-213ENST00000484184 FER1L6Q2WGJ9 1857 aa17.43■□□□□ 0.38
DNMT3A-213ENST00000484184 H0YIN7 160 aa17.42■□□□□ 0.38
DNMT3A-213ENST00000484184 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
DNMT3A-213ENST00000484184 EIF5P55010 431 aaKnown RBP17.41■□□□□ 0.38
DNMT3A-213ENST00000484184 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
DNMT3A-213ENST00000484184 COL11A2P13942 1736 aaPredicted RBP17.4■□□□□ 0.38
DNMT3A-213ENST00000484184 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
DNMT3A-213ENST00000484184 TBC1D9BQ66K14 1250 aa17.39■□□□□ 0.37
DNMT3A-213ENST00000484184 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
DNMT3A-213ENST00000484184 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
DNMT3A-213ENST00000484184 C21orf2O43822 256 aa17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 POTEIP0CG38 1075 aa17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 ERFEQ4G0M1 354 aa17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 CREBZFQ9NS37 354 aa17.38■□□□□ 0.37
DNMT3A-213ENST00000484184 HMOX1P09601 288 aa17.37■□□□□ 0.37
DNMT3A-213ENST00000484184 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
DNMT3A-213ENST00000484184 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
DNMT3A-213ENST00000484184 LTBP3Q9NS15 1303 aa17.37■□□□□ 0.37
DNMT3A-213ENST00000484184 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 SLX4Q8IY92 1834 aa17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 CHADLQ6NUI6 762 aa17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
DNMT3A-213ENST00000484184 DDNO94850 711 aaPredicted RBP17.35■□□□□ 0.37
DNMT3A-213ENST00000484184 STARD3NLO95772 234 aa17.35■□□□□ 0.37
DNMT3A-213ENST00000484184 PDE6BP35913 854 aa17.35■□□□□ 0.37
DNMT3A-213ENST00000484184 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
DNMT3A-213ENST00000484184 PDZRN3Q9UPQ7 1066 aa17.35■□□□□ 0.37
DNMT3A-213ENST00000484184 A0A087WZG4 1122 aa17.34■□□□□ 0.37
DNMT3A-213ENST00000484184 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
DNMT3A-213ENST00000484184 KNSTRNQ9Y448 316 aa17.34■□□□□ 0.37
DNMT3A-213ENST00000484184 PASKQ96RG2 1323 aa17.33■□□□□ 0.36
DNMT3A-213ENST00000484184 FOXN1O15353 648 aa17.33■□□□□ 0.36
DNMT3A-213ENST00000484184 TAOK3Q9H2K8 898 aa17.33■□□□□ 0.36
DNMT3A-213ENST00000484184 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
DNMT3A-213ENST00000484184 CNTNAP1P78357 1384 aa17.32■□□□□ 0.36
DNMT3A-213ENST00000484184 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
DNMT3A-213ENST00000484184 SRGNP10124 158 aa17.32■□□□□ 0.36
DNMT3A-213ENST00000484184 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
DNMT3A-213ENST00000484184 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
DNMT3A-213ENST00000484184 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
DNMT3A-213ENST00000484184 CACNA1SQ13698 1873 aa17.31■□□□□ 0.36
DNMT3A-213ENST00000484184 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 L3MBTL3Q96JM7 780 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-213ENST00000484184 SCN4AP35499 1836 aa17.29■□□□□ 0.36
DNMT3A-213ENST00000484184 ITGBL1O95965 494 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-213ENST00000484184 A1BGP04217 495 aa17.29■□□□□ 0.36
DNMT3A-213ENST00000484184 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
DNMT3A-213ENST00000484184 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
DNMT3A-213ENST00000484184 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
DNMT3A-213ENST00000484184 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms