RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TRPC5Q9UL62 973 aaPredicted RBP9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 KIF1BO60333 1816 aa9.09□□□□□ -0.95
SEMA3D-204ENST00000484038 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
SEMA3D-204ENST00000484038 ROBO2Q9HCK4 1378 aa9.09□□□□□ -0.95
SEMA3D-204ENST00000484038 SOS2Q07890 1332 aaPredicted RBP9.08□□□□□ -0.96
SEMA3D-204ENST00000484038 CCNYL3P0C7X3 344 aa9.08□□□□□ -0.96
SEMA3D-204ENST00000484038 PTPRNQ16849 979 aa9.08□□□□□ -0.96
SEMA3D-204ENST00000484038 DESI1Q6ICB0 168 aa9.08□□□□□ -0.96
SEMA3D-204ENST00000484038 COL22A1Q8NFW1 1626 aaPredicted RBP9.08□□□□□ -0.96
SEMA3D-204ENST00000484038 ATRNO75882 1429 aa9.07□□□□□ -0.96
SEMA3D-204ENST00000484038 CTHP32929 405 aa9.07□□□□□ -0.96
SEMA3D-204ENST00000484038 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
SEMA3D-204ENST00000484038 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
SEMA3D-204ENST00000484038 PPARGC1BQ86YN6 1023 aaKnown RBP9.06□□□□□ -0.96
SEMA3D-204ENST00000484038 FNBP4Q8N3X1 1017 aaPredicted RBP9.06□□□□□ -0.96
SEMA3D-204ENST00000484038 MARF1Q9Y4F3 1742 aaKnown RBP9.06□□□□□ -0.96
SEMA3D-204ENST00000484038 MYOM2P54296 1465 aa9.06□□□□□ -0.96
SEMA3D-204ENST00000484038 AP1G2O75843 785 aa9.05□□□□□ -0.96
SEMA3D-204ENST00000484038 HFM1A2PYH4 1435 aa9.05□□□□□ -0.96
SEMA3D-204ENST00000484038 CDC42BPGQ6DT37 1551 aa9.05□□□□□ -0.96
SEMA3D-204ENST00000484038 XPCQ01831 940 aaPredicted RBP9.05□□□□□ -0.96
SEMA3D-204ENST00000484038 ESCO1Q5FWF5 840 aa9.05□□□□□ -0.96
SEMA3D-204ENST00000484038 PRAG1Q86YV5 1406 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 BCL9LQ86UU0 1499 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 PXDNQ92626 1479 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 RFC5P40937 340 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 ZNF697Q5TEC3 545 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 SPRYD7Q5W111 196 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 EMID1Q96A84 441 aaPredicted RBP9.04□□□□□ -0.96
SEMA3D-204ENST00000484038 PPLO60437 1756 aa9.03□□□□□ -0.96
SEMA3D-204ENST00000484038 PER1O15534 1290 aaPredicted RBP9.03□□□□□ -0.96
SEMA3D-204ENST00000484038 FOXO3O43524 673 aa9.03□□□□□ -0.96
SEMA3D-204ENST00000484038 CD2BP2O95400 341 aaKnown RBP9.03□□□□□ -0.96
SEMA3D-204ENST00000484038 RPIAP49247 311 aa9.03□□□□□ -0.96
SEMA3D-204ENST00000484038 PPP2R2DQ66LE6 453 aa9.03□□□□□ -0.96
SEMA3D-204ENST00000484038 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 KCNH2Q12809 1159 aa9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 TRIM32Q13049 653 aa9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 CCDC125Q86Z20 511 aa9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 UNC93B1Q9H1C4 597 aa9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 MAP10Q9P2G4 905 aa9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
SEMA3D-204ENST00000484038 NAIPQ13075 1403 aa9.01□□□□□ -0.97
SEMA3D-204ENST00000484038 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
SEMA3D-204ENST00000484038 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
SEMA3D-204ENST00000484038 EVA1BQ9NVM1 165 aa9.01□□□□□ -0.97
SEMA3D-204ENST00000484038 RPGRIP1LQ68CZ1 1315 aa9.01□□□□□ -0.97
SEMA3D-204ENST00000484038 LRPPRCP42704 1394 aaKnown RBP9.01□□□□□ -0.97
SEMA3D-204ENST00000484038 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
SEMA3D-204ENST00000484038 STK26Q9P289 416 aa9□□□□□ -0.97
SEMA3D-204ENST00000484038 GLI3P10071 1580 aa9□□□□□ -0.97
SEMA3D-204ENST00000484038 BLMP54132 1417 aaPredicted RBP9□□□□□ -0.97
SEMA3D-204ENST00000484038 FOXC1Q12948 553 aa9□□□□□ -0.97
SEMA3D-204ENST00000484038 USP32Q8NFA0 1604 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 USP17L8P0C7I0 530 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 WAPLQ7Z5K2 1190 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 UNC5CLQ8IV45 518 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 IRX2Q9BZI1 471 aaPredicted RBP8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 KIF1AQ12756 1690 aa8.99□□□□□ -0.97
SEMA3D-204ENST00000484038 RRBP1Q9P2E9 1410 aaKnown RBP8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 BRWD3Q6RI45 1802 aa8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 SF3B2Q13435 895 aaKnown RBP8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 DEFB132Q7Z7B7 95 aa8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 FMN2Q9NZ56 1722 aa8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 CCDC144AA2RUR9 1427 aa8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 SLIT2O94813 1529 aa8.98□□□□□ -0.97
SEMA3D-204ENST00000484038 PLCH1Q4KWH8 1693 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 TNFRSF10AO00220 468 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 F12P00748 615 aaPredicted RBP8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 TMEM259Q4ZIN3 620 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 ADGRF5Q8IZF2 1346 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 PLEKHH1Q9ULM0 1364 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 TECPR2O15040 1411 aa8.97□□□□□ -0.97
SEMA3D-204ENST00000484038 RGL3Q3MIN7 710 aa8.96□□□□□ -0.97
SEMA3D-204ENST00000484038 PDZRN3Q9UPQ7 1066 aa8.96□□□□□ -0.97
SEMA3D-204ENST00000484038 SPATA31A3Q5VYP0 1347 aa8.96□□□□□ -0.97
SEMA3D-204ENST00000484038 IFT172Q9UG01 1749 aa8.96□□□□□ -0.98
SEMA3D-204ENST00000484038 MYT1Q01538 1121 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 TNS3Q68CZ2 1445 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 TMEM132EQ6IEE7 984 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 KRT28Q7Z3Y7 464 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 SEPT12Q8IYM1 358 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 BAP1Q92560 729 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 ABCA3Q99758 1704 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 LRP5O75197 1615 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 GFRA3O60609 400 aa8.95□□□□□ -0.98
SEMA3D-204ENST00000484038 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
SEMA3D-204ENST00000484038 NWD2Q9ULI1 1742 aa8.94□□□□□ -0.98
SEMA3D-204ENST00000484038 ABCC11Q96J66 1382 aa8.94□□□□□ -0.98
SEMA3D-204ENST00000484038 ANKRD30BQ9BXX2 1392 aa8.94□□□□□ -0.98
SEMA3D-204ENST00000484038 AGERQ15109 404 aa8.94□□□□□ -0.98
SEMA3D-204ENST00000484038 NR6A1Q15406 480 aa8.94□□□□□ -0.98
SEMA3D-204ENST00000484038 VPS72Q15906 364 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms