RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 KCNQ2O43526 872 aa11.61□□□□□ -0.55
SHROOM4-204ENST00000483955 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
SHROOM4-204ENST00000483955 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
SHROOM4-204ENST00000483955 ZNF831Q5JPB2 1677 aa11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 ALDH1L2Q3SY69 923 aa11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 TSPYL6Q8N831 410 aa11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 C8orf58Q8NAV2 365 aa11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 ZNF496Q96IT1 587 aaPredicted RBP11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 TEX13AQ9BXU3 409 aaPredicted RBP11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 RCAN3Q9UKA8 241 aa11.6□□□□□ -0.55
SHROOM4-204ENST00000483955 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 VAMP4O75379 141 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 CCDC30Q5VVM6 783 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 GTF3C3Q9Y5Q9 886 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 KAT6BQ8WYB5 2073 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 C5P01031 1676 aa11.59□□□□□ -0.55
SHROOM4-204ENST00000483955 ELL2O00472 640 aaPredicted RBP11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 TRIM37O94972 964 aa11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 RGPD3A6NKT7 1758 aaPredicted RBP11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 RGPD4Q7Z3J3 1758 aa11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 ERBB4Q15303 1308 aa11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 KIF16BQ96L93 1317 aa11.58□□□□□ -0.56
SHROOM4-204ENST00000483955 LY75O60449 1722 aa11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 SIK1P57059 783 aa11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 TJP1Q07157 1748 aa11.57□□□□□ -0.56
SHROOM4-204ENST00000483955 STARD3NLO95772 234 aa11.56□□□□□ -0.56
SHROOM4-204ENST00000483955 PLSCR1O15162 318 aa11.55□□□□□ -0.56
SHROOM4-204ENST00000483955 EIF2S2P20042 333 aaKnown RBP11.55□□□□□ -0.56
SHROOM4-204ENST00000483955 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
SHROOM4-204ENST00000483955 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
SHROOM4-204ENST00000483955 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
SHROOM4-204ENST00000483955 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
SHROOM4-204ENST00000483955 SLC27A3Q5K4L6 730 aa11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 PTF1AQ7RTS3 328 aa11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 DNAJC10Q8IXB1 793 aa11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 CCNL1Q9UK58 526 aaPredicted RBP11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 COL5A3P25940 1745 aaPredicted RBP11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
SHROOM4-204ENST00000483955 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 APBA3O96018 575 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 MRPL50Q8N5N7 158 aaKnown RBP11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 BCL2L13Q9BXK5 485 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 CHPF2Q9P2E5 772 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 PTPRCP08575 1304 aa11.53□□□□□ -0.56
SHROOM4-204ENST00000483955 RREB1Q92766 1687 aa11.52□□□□□ -0.56
SHROOM4-204ENST00000483955 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.57
SHROOM4-204ENST00000483955 BAG6P46379 1132 aa11.52□□□□□ -0.57
SHROOM4-204ENST00000483955 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
SHROOM4-204ENST00000483955 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
SHROOM4-204ENST00000483955 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
SHROOM4-204ENST00000483955 CNTNAP4Q9C0A0 1308 aa11.52□□□□□ -0.57
SHROOM4-204ENST00000483955 BCAR3O75815 825 aa11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 CYP19A1P11511 503 aaPredicted RBP11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 MS4A1P11836 297 aa11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 ZKSCAN2Q63HK3 967 aa11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
SHROOM4-204ENST00000483955 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
SHROOM4-204ENST00000483955 ITPK1Q13572 414 aa11.5□□□□□ -0.57
SHROOM4-204ENST00000483955 TXNRD1Q16881 649 aa11.5□□□□□ -0.57
SHROOM4-204ENST00000483955 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
SHROOM4-204ENST00000483955 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
SHROOM4-204ENST00000483955 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
SHROOM4-204ENST00000483955 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 MYL6BP14649 208 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 IL6STP40189 918 aaPredicted RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 FLIIQ13045 1269 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 PDIA6Q15084 440 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 LINC00116Q8NCU8 138 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 FRAT1Q92837 279 aaPredicted RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 NOB1Q9ULX3 412 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 ZBTB1Q9Y2K1 713 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
SHROOM4-204ENST00000483955 A1BGP04217 495 aa11.48□□□□□ -0.57
SHROOM4-204ENST00000483955 NEFLP07196 543 aa11.48□□□□□ -0.57
SHROOM4-204ENST00000483955 FKBP5Q13451 457 aaPredicted RBP11.48□□□□□ -0.57
SHROOM4-204ENST00000483955 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
SHROOM4-204ENST00000483955 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms