RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 YEATS4O95619 227 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 CCDC155Q8N6L0 562 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 A0A1W2PRG0 241 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 SART3Q15020 963 aaKnown RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 FERMT3Q86UX7 667 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 CWC25Q9NXE8 425 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 PPP1R12BO60237 982 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 PIK3R5Q8WYR1 880 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 KRT18P05783 430 aaKnown RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 UBTFL1P0CB47 393 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-207ENST00000483888 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 CAVIN2O95810 425 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 TRIM4Q9C037 500 aa11.82□□□□□ -0.52
COL12A1-207ENST00000483888 TACC1O75410 805 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 ANO6Q4KMQ2 910 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 TUBB4AP04350 444 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
COL12A1-207ENST00000483888 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 PFDN1O60925 122 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 TSNAXIP1Q2TAA8 658 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 DIXDC1Q155Q3 683 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
COL12A1-207ENST00000483888 PTGS1P23219 599 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 EHBP1Q8NDI1 1231 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 NDUFAB1O14561 156 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 FSD2A1L4K1 749 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 SAMD15Q9P1V8 674 aa11.81□□□□□ -0.52
COL12A1-207ENST00000483888 IFT74Q96LB3 600 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 PPFIBP2Q8ND30 876 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 RHOXF2BP0C7M4 288 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 OAS2P29728 719 aaKnown RBP11.8□□□□□ -0.52
COL12A1-207ENST00000483888 ZBTB17Q13105 803 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 STMN2Q93045 179 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 RHOXF2Q9BQY4 288 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 GNAI1P63096 354 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 ELF2Q15723 593 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 MRFAP1Q9Y605 127 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-207ENST00000483888 SELENOSQ9BQE4 189 aa11.8□□□□□ -0.52
COL12A1-207ENST00000483888 RAB3IL1Q8TBN0 382 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 SYT10Q6XYQ8 523 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 BCL2L12Q9HB09 334 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 AMPHP49418 695 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 FKBP15Q5T1M5 1219 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 CACNA2D4Q7Z3S7 1137 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL12A1-207ENST00000483888 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 MX1P20591 662 aa11.79□□□□□ -0.52
COL12A1-207ENST00000483888 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
COL12A1-207ENST00000483888 SURF6O75683 361 aaKnown RBP11.78□□□□□ -0.52
COL12A1-207ENST00000483888 EVCP57679 992 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
COL12A1-207ENST00000483888 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 ZBTB16Q05516 673 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 STMN4Q9H169 189 aaPredicted RBP11.78□□□□□ -0.52
COL12A1-207ENST00000483888 UBASH3AP57075 661 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 CCDC38Q502W7 563 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 CAPN7Q9Y6W3 813 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 BIN1O00499 593 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
COL12A1-207ENST00000483888 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
COL12A1-207ENST00000483888 TEX2Q8IWB9 1127 aa11.77□□□□□ -0.52
COL12A1-207ENST00000483888 NEK11Q8NG66 645 aa11.77□□□□□ -0.52
COL12A1-207ENST00000483888 SMC6Q96SB8 1091 aa11.77□□□□□ -0.52
COL12A1-207ENST00000483888 ZHX3Q9H4I2 956 aa11.77□□□□□ -0.52
COL12A1-207ENST00000483888 PPP2R3AQ06190 1150 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 LRRC23Q53EV4 343 aaPredicted RBP11.77□□□□□ -0.53
COL12A1-207ENST00000483888 TRIM7Q9C029 511 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 CWC27Q6UX04 472 aaKnown RBP11.77□□□□□ -0.53
COL12A1-207ENST00000483888 CTNNBL1Q8WYA6 563 aaPredicted RBP11.77□□□□□ -0.53
COL12A1-207ENST00000483888 HOOK3Q86VS8 718 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 SRCIN1Q9C0H9 1055 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 GOLGA6CA6NDK9 693 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 GOLGA6DP0CG33 693 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 MORC4Q8TE76 937 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 TTC14Q96N46 770 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 GOLGA6AQ9NYA3 693 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 G3V3G9 751 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 SYT1P21579 422 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 MAP3K9P80192 1104 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 FAM200AQ8TCP9 573 aa11.77□□□□□ -0.53
COL12A1-207ENST00000483888 SMIM24O75264 130 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 TSPYL2Q9H2G4 693 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-207ENST00000483888 GNAI2P04899 355 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 MAP7Q14244 749 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 ISM2Q6H9L7 571 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 SIL1Q9H173 461 aa11.76□□□□□ -0.53
COL12A1-207ENST00000483888 SLC3A2P08195 630 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms