RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PPP2R1AP30153 589 aa24.24■■□□□ 1.47
ATG4B-221ENST00000483778 ZNF496Q96IT1 587 aaPredicted RBP24.24■■□□□ 1.47
ATG4B-221ENST00000483778 RSPH6AQ9H0K4 717 aa24.24■■□□□ 1.47
ATG4B-221ENST00000483778 KCNQ3O43525 872 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 ZPR1O75312 459 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 FCHSD2O94868 740 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 CANXP27824 592 aaKnown RBP24.23■■□□□ 1.47
ATG4B-221ENST00000483778 CHRNA5P30532 468 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 PRKAR2BP31323 418 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 ARHGAP27Q6ZUM4 889 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 VSIG10Q8N0Z9 540 aa24.23■■□□□ 1.47
ATG4B-221ENST00000483778 GPBP1L1Q9HC44 474 aaPredicted RBP24.23■■□□□ 1.47
ATG4B-221ENST00000483778 NFIXQ14938 502 aa24.22■■□□□ 1.47
ATG4B-221ENST00000483778 NARFQ9UHQ1 456 aa24.22■■□□□ 1.47
ATG4B-221ENST00000483778 COL15A1P39059 1388 aa24.21■■□□□ 1.47
ATG4B-221ENST00000483778 GAS2L2Q8NHY3 880 aa24.21■■□□□ 1.47
ATG4B-221ENST00000483778 TEFQ10587 303 aa24.2■■□□□ 1.46
ATG4B-221ENST00000483778 ZNF790Q6PG37 636 aa24.2■■□□□ 1.46
ATG4B-221ENST00000483778 NRXN2Q9P2S2 1712 aa24.18■■□□□ 1.46
ATG4B-221ENST00000483778 SBF1O95248 1867 aa24.18■■□□□ 1.46
ATG4B-221ENST00000483778 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
ATG4B-221ENST00000483778 TTC5Q8N0Z6 440 aa24.18■■□□□ 1.46
ATG4B-221ENST00000483778 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
ATG4B-221ENST00000483778 PIM2Q9P1W9 311 aa24.18■■□□□ 1.46
ATG4B-221ENST00000483778 CEMIPQ8WUJ3 1361 aa24.17■■□□□ 1.46
ATG4B-221ENST00000483778 HEG1Q9ULI3 1381 aa24.17■■□□□ 1.46
ATG4B-221ENST00000483778 A1BGP04217 495 aa24.16■■□□□ 1.46
ATG4B-221ENST00000483778 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
ATG4B-221ENST00000483778 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.46
ATG4B-221ENST00000483778 CEP350Q5VT06 3117 aa24.16■■□□□ 1.46
ATG4B-221ENST00000483778 KIF3CO14782 793 aa24.15■■□□□ 1.46
ATG4B-221ENST00000483778 STARD3NLO95772 234 aa24.15■■□□□ 1.46
ATG4B-221ENST00000483778 SERPINB2P05120 415 aa24.14■■□□□ 1.45
ATG4B-221ENST00000483778 DALRD3Q5D0E6 543 aaKnown RBP24.14■■□□□ 1.45
ATG4B-221ENST00000483778 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
ATG4B-221ENST00000483778 MCM10Q7L590 875 aa24.14■■□□□ 1.45
ATG4B-221ENST00000483778 PRAMEF22A3QJZ6 481 aa24.13■■□□□ 1.45
ATG4B-221ENST00000483778 DCTN1Q14203 1278 aa24.13■■□□□ 1.45
ATG4B-221ENST00000483778 TBC1D2BQ9UPU7 963 aa24.13■■□□□ 1.45
ATG4B-221ENST00000483778 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
ATG4B-221ENST00000483778 BTBD11A6QL63 1104 aa24.12■■□□□ 1.45
ATG4B-221ENST00000483778 ANKRD31Q8N7Z5 1873 aa24.12■■□□□ 1.45
ATG4B-221ENST00000483778 DLG5Q8TDM6 1919 aa24.12■■□□□ 1.45
ATG4B-221ENST00000483778 CCDC88AQ3V6T2 1871 aa24.11■■□□□ 1.45
ATG4B-221ENST00000483778 PIP4K2AP48426 406 aaPredicted RBP24.11■■□□□ 1.45
ATG4B-221ENST00000483778 C9orf131Q5VYM1 1079 aa24.11■■□□□ 1.45
ATG4B-221ENST00000483778 TBC1D9BQ66K14 1250 aa24.11■■□□□ 1.45
ATG4B-221ENST00000483778 FMNL2Q96PY5 1086 aa24.11■■□□□ 1.45
ATG4B-221ENST00000483778 ZNF330Q9Y3S2 320 aaPredicted RBP24.11■■□□□ 1.45
ATG4B-221ENST00000483778 USP16Q9Y5T5 823 aa24.11■■□□□ 1.45
ATG4B-221ENST00000483778 CARMIL3Q8ND23 1372 aa24.11■■□□□ 1.45
ATG4B-221ENST00000483778 CCDC24Q8N4L8 307 aa24.1■■□□□ 1.45
ATG4B-221ENST00000483778 DLEC1Q9Y238 1755 aa24.1■■□□□ 1.45
ATG4B-221ENST00000483778 TEX13AQ9BXU3 409 aaPredicted RBP24.09■■□□□ 1.45
ATG4B-221ENST00000483778 NMRK2Q9NPI5 230 aa24.08■■□□□ 1.45
ATG4B-221ENST00000483778 SCN7AQ01118 1682 aa24.07■■□□□ 1.44
ATG4B-221ENST00000483778 A0A087WZG4 1122 aa24.06■■□□□ 1.44
ATG4B-221ENST00000483778 IL6STP40189 918 aaPredicted RBP24.06■■□□□ 1.44
ATG4B-221ENST00000483778 CAMTA2O94983 1202 aa24.05■■□□□ 1.44
ATG4B-221ENST00000483778 PRELPP51888 382 aa24.05■■□□□ 1.44
ATG4B-221ENST00000483778 C2CD5Q86YS7 1000 aa24.05■■□□□ 1.44
ATG4B-221ENST00000483778 MIS18AQ9NYP9 233 aa24.05■■□□□ 1.44
ATG4B-221ENST00000483778 RASSF7Q02833 373 aa24.04■■□□□ 1.44
ATG4B-221ENST00000483778 RTF1Q92541 710 aaKnown RBP24.04■■□□□ 1.44
ATG4B-221ENST00000483778 HSPA6P17066 643 aa24.03■■□□□ 1.44
ATG4B-221ENST00000483778 RNF181Q9P0P0 153 aa24.03■■□□□ 1.44
ATG4B-221ENST00000483778 BCORQ6W2J9 1755 aa24.02■■□□□ 1.44
ATG4B-221ENST00000483778 COL11A2P13942 1736 aaPredicted RBP24.01■■□□□ 1.43
ATG4B-221ENST00000483778 NBPF26B4DH59 902 aa24.01■■□□□ 1.43
ATG4B-221ENST00000483778 PRR5LQ6MZQ0 368 aa24.01■■□□□ 1.43
ATG4B-221ENST00000483778 NBPF10Q6P3W6 841 aaKnown RBP24.01■■□□□ 1.43
ATG4B-221ENST00000483778 NBPF15Q8N660 670 aa24.01■■□□□ 1.43
ATG4B-221ENST00000483778 H0YIN7 160 aa24■■□□□ 1.43
ATG4B-221ENST00000483778 DZIP3Q86Y13 1208 aaKnown RBP24■■□□□ 1.43
ATG4B-221ENST00000483778 TTLL6Q8N841 843 aa24■■□□□ 1.43
ATG4B-221ENST00000483778 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
ATG4B-221ENST00000483778 CACNA1SQ13698 1873 aa24■■□□□ 1.43
ATG4B-221ENST00000483778 HTATSF1O43719 755 aaKnown RBP23.99■■□□□ 1.43
ATG4B-221ENST00000483778 SNRPA1P09661 255 aaKnown RBP23.99■■□□□ 1.43
ATG4B-221ENST00000483778 TAF7Q15545 349 aaPredicted RBP23.99■■□□□ 1.43
ATG4B-221ENST00000483778 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
ATG4B-221ENST00000483778 SLX4Q8IY92 1834 aa23.98■■□□□ 1.43
ATG4B-221ENST00000483778 SETDB2Q96T68 719 aa23.97■■□□□ 1.43
ATG4B-221ENST00000483778 BRIP1Q9BX63 1249 aa23.97■■□□□ 1.43
ATG4B-221ENST00000483778 ZNF219Q9P2Y4 722 aaPredicted RBP23.97■■□□□ 1.43
ATG4B-221ENST00000483778 TOMM70O94826 608 aa23.96■■□□□ 1.43
ATG4B-221ENST00000483778 ZNF622Q969S3 477 aaKnown RBP eCLIP23.96■■□□□ 1.431e-6■■□□□ 11.8
ATG4B-221ENST00000483778 RRAGCQ9HB90 399 aa23.96■■□□□ 1.43
ATG4B-221ENST00000483778 NFKBIEO00221 500 aa23.95■■□□□ 1.42
ATG4B-221ENST00000483778 KDM3BQ7LBC6 1761 aa23.95■■□□□ 1.42
ATG4B-221ENST00000483778 FER1L6Q2WGJ9 1857 aa23.94■■□□□ 1.42
ATG4B-221ENST00000483778 C21orf2O43822 256 aa23.92■■□□□ 1.42
ATG4B-221ENST00000483778 PDE6BP35913 854 aa23.92■■□□□ 1.42
ATG4B-221ENST00000483778 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
ATG4B-221ENST00000483778 NPM2Q86SE8 214 aaKnown RBP23.92■■□□□ 1.42
ATG4B-221ENST00000483778 DICER1Q9UPY3 1922 aaKnown RBP23.91■■□□□ 1.42
ATG4B-221ENST00000483778 LMNB1P20700 586 aa23.91■■□□□ 1.42
ATG4B-221ENST00000483778 HLFQ16534 295 aa23.91■■□□□ 1.42
ATG4B-221ENST00000483778 CNBD1Q8NA66 436 aa23.91■■□□□ 1.42
ATG4B-221ENST00000483778 NUP98P52948 1817 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms