RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
COMMD2-205ENST00000483708 ADAMTS7Q9UKP4 1686 aa16.55■□□□□ 0.24
COMMD2-205ENST00000483708 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
COMMD2-205ENST00000483708 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
COMMD2-205ENST00000483708 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
COMMD2-205ENST00000483708 NLGN2Q8NFZ4 835 aa16.54■□□□□ 0.24
COMMD2-205ENST00000483708 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
COMMD2-205ENST00000483708 CD2APQ9Y5K6 639 aa16.54■□□□□ 0.24
COMMD2-205ENST00000483708 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
COMMD2-205ENST00000483708 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
COMMD2-205ENST00000483708 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
COMMD2-205ENST00000483708 ZNF831Q5JPB2 1677 aa16.53■□□□□ 0.24
COMMD2-205ENST00000483708 USP42Q9H9J4 1324 aaKnown RBP16.52■□□□□ 0.24
COMMD2-205ENST00000483708 A1BGP04217 495 aa16.52■□□□□ 0.24
COMMD2-205ENST00000483708 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.24
COMMD2-205ENST00000483708 FKBP8Q14318 412 aa16.52■□□□□ 0.24
COMMD2-205ENST00000483708 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
COMMD2-205ENST00000483708 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
COMMD2-205ENST00000483708 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
COMMD2-205ENST00000483708 PARP3Q9Y6F1 533 aa16.52■□□□□ 0.24
COMMD2-205ENST00000483708 GOLGB1Q14789 3259 aaKnown RBP16.52■□□□□ 0.23
COMMD2-205ENST00000483708 A0A087WZG4 1122 aa16.51■□□□□ 0.23
COMMD2-205ENST00000483708 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
COMMD2-205ENST00000483708 GPR162Q16538 588 aa16.51■□□□□ 0.23
COMMD2-205ENST00000483708 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
COMMD2-205ENST00000483708 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
COMMD2-205ENST00000483708 TUBGCP6Q96RT7 1819 aa16.51■□□□□ 0.23
COMMD2-205ENST00000483708 IL6STP40189 918 aaPredicted RBP16.5■□□□□ 0.23
COMMD2-205ENST00000483708 CCDC184Q52MB2 194 aa16.5■□□□□ 0.23
COMMD2-205ENST00000483708 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
COMMD2-205ENST00000483708 UTRNP46939 3433 aa16.5■□□□□ 0.23
COMMD2-205ENST00000483708 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
COMMD2-205ENST00000483708 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
COMMD2-205ENST00000483708 COL15A1P39059 1388 aa16.49■□□□□ 0.23
COMMD2-205ENST00000483708 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
COMMD2-205ENST00000483708 TM4SF1P30408 202 aa16.48■□□□□ 0.23
COMMD2-205ENST00000483708 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
COMMD2-205ENST00000483708 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
COMMD2-205ENST00000483708 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
COMMD2-205ENST00000483708 APAF1O14727 1248 aa16.47■□□□□ 0.23
COMMD2-205ENST00000483708 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
COMMD2-205ENST00000483708 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
COMMD2-205ENST00000483708 TJP1Q07157 1748 aa16.46■□□□□ 0.23
COMMD2-205ENST00000483708 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
COMMD2-205ENST00000483708 BCL2L12Q9HB09 334 aa16.46■□□□□ 0.23
COMMD2-205ENST00000483708 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
COMMD2-205ENST00000483708 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
COMMD2-205ENST00000483708 DDR1Q08345 913 aa16.45■□□□□ 0.22
COMMD2-205ENST00000483708 POLRMTO00411 1230 aaKnown RBP16.44■□□□□ 0.22
COMMD2-205ENST00000483708 TGFB2P61812 414 aa16.44■□□□□ 0.22
COMMD2-205ENST00000483708 NFIXQ14938 502 aa16.44■□□□□ 0.22
COMMD2-205ENST00000483708 COL24A1Q17RW2 1714 aa16.44■□□□□ 0.22
COMMD2-205ENST00000483708 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
COMMD2-205ENST00000483708 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
COMMD2-205ENST00000483708 CHL1O00533 1208 aa16.43■□□□□ 0.22
COMMD2-205ENST00000483708 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
COMMD2-205ENST00000483708 BICDL1Q6ZP65 573 aa16.43■□□□□ 0.22
COMMD2-205ENST00000483708 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
COMMD2-205ENST00000483708 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
COMMD2-205ENST00000483708 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
COMMD2-205ENST00000483708 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
COMMD2-205ENST00000483708 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
COMMD2-205ENST00000483708 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
COMMD2-205ENST00000483708 YBX3P16989 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
COMMD2-205ENST00000483708 YY1P25490 414 aa16.42■□□□□ 0.22
COMMD2-205ENST00000483708 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
COMMD2-205ENST00000483708 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
COMMD2-205ENST00000483708 SERPINB2P05120 415 aa16.41■□□□□ 0.22
COMMD2-205ENST00000483708 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
COMMD2-205ENST00000483708 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
COMMD2-205ENST00000483708 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
COMMD2-205ENST00000483708 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
COMMD2-205ENST00000483708 DPEP1P16444 411 aa16.4■□□□□ 0.22
COMMD2-205ENST00000483708 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
COMMD2-205ENST00000483708 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
COMMD2-205ENST00000483708 MYL6BP14649 208 aa16.39■□□□□ 0.21
COMMD2-205ENST00000483708 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
COMMD2-205ENST00000483708 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
COMMD2-205ENST00000483708 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
COMMD2-205ENST00000483708 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
COMMD2-205ENST00000483708 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
COMMD2-205ENST00000483708 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
COMMD2-205ENST00000483708 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
COMMD2-205ENST00000483708 KCNA3P22001 575 aa16.36■□□□□ 0.21
COMMD2-205ENST00000483708 GNAI1P63096 354 aa16.36■□□□□ 0.21
COMMD2-205ENST00000483708 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
COMMD2-205ENST00000483708 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
COMMD2-205ENST00000483708 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
COMMD2-205ENST00000483708 NPHP1O15259 732 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 FAM9BQ8IZU0 186 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 MBIPQ9NS73 344 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 BCS1LQ9Y276 419 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 ERBB4Q15303 1308 aa16.35■□□□□ 0.21
COMMD2-205ENST00000483708 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
COMMD2-205ENST00000483708 RGL2O15211 777 aa16.34■□□□□ 0.21
COMMD2-205ENST00000483708 CHRNA5P30532 468 aa16.34■□□□□ 0.21
COMMD2-205ENST00000483708 HLFQ16534 295 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms