RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 CANXP27824 592 aaKnown RBP22.98■■□□□ 1.27
RTCA-204ENST00000483474 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
RTCA-204ENST00000483474 PLEKHF1Q96S99 279 aa22.98■■□□□ 1.27
RTCA-204ENST00000483474 A0A087WZG4 1122 aa22.97■■□□□ 1.27
RTCA-204ENST00000483474 GRIN3BO60391 1043 aa22.97■■□□□ 1.27
RTCA-204ENST00000483474 DCTN1Q14203 1278 aa22.97■■□□□ 1.27
RTCA-204ENST00000483474 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
RTCA-204ENST00000483474 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
RTCA-204ENST00000483474 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
RTCA-204ENST00000483474 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
RTCA-204ENST00000483474 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
RTCA-204ENST00000483474 COL15A1P39059 1388 aa22.96■■□□□ 1.27
RTCA-204ENST00000483474 SRP68Q9UHB9 627 aaKnown RBP22.95■■□□□ 1.26
RTCA-204ENST00000483474 SNRPA1P09661 255 aaKnown RBP22.94■■□□□ 1.26
RTCA-204ENST00000483474 NARFQ9UHQ1 456 aa22.94■■□□□ 1.26
RTCA-204ENST00000483474 LMOD3Q0VAK6 560 aa22.93■■□□□ 1.26
RTCA-204ENST00000483474 USPL1Q5W0Q7 1092 aa22.93■■□□□ 1.26
RTCA-204ENST00000483474 ZNF330Q9Y3S2 320 aaPredicted RBP22.93■■□□□ 1.26
RTCA-204ENST00000483474 KCNQ3O43525 872 aa22.92■■□□□ 1.26
RTCA-204ENST00000483474 FKBP8Q14318 412 aa22.92■■□□□ 1.26
RTCA-204ENST00000483474 RIPK4P57078 832 aa22.91■■□□□ 1.26
RTCA-204ENST00000483474 TGFB2P61812 414 aa22.91■■□□□ 1.26
RTCA-204ENST00000483474 KIF13BQ9NQT8 1826 aa22.9■■□□□ 1.26
RTCA-204ENST00000483474 ZNF316A6NFI3 1004 aaPredicted RBP22.9■■□□□ 1.26
RTCA-204ENST00000483474 IL6STP40189 918 aaPredicted RBP22.9■■□□□ 1.26
RTCA-204ENST00000483474 EIF5P55010 431 aaKnown RBP22.9■■□□□ 1.26
RTCA-204ENST00000483474 A1BGP04217 495 aa22.88■■□□□ 1.25
RTCA-204ENST00000483474 RUNDC1Q96C34 613 aa22.87■■□□□ 1.25
RTCA-204ENST00000483474 MIS18AQ9NYP9 233 aa22.87■■□□□ 1.25
RTCA-204ENST00000483474 USP16Q9Y5T5 823 aa22.87■■□□□ 1.25
RTCA-204ENST00000483474 YBX3P16989 372 aaKnown RBP eCLIP22.86■■□□□ 1.254e-8■■□□□ 14.1
RTCA-204ENST00000483474 TM4SF1P30408 202 aa22.86■■□□□ 1.25
RTCA-204ENST00000483474 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
RTCA-204ENST00000483474 CCDC146Q8IYE0 955 aa22.86■■□□□ 1.25
RTCA-204ENST00000483474 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
RTCA-204ENST00000483474 NEUROD2Q15784 382 aa22.85■■□□□ 1.25
RTCA-204ENST00000483474 C10orf71Q711Q0 1435 aa22.84■■□□□ 1.25
RTCA-204ENST00000483474 KDM3BQ7LBC6 1761 aa22.84■■□□□ 1.25
RTCA-204ENST00000483474 THUMPD2Q9BTF0 503 aaKnown RBP22.84■■□□□ 1.25
RTCA-204ENST00000483474 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
RTCA-204ENST00000483474 TBC1D2BQ9UPU7 963 aa22.84■■□□□ 1.25
RTCA-204ENST00000483474 GOLGB1Q14789 3259 aaKnown RBP22.84■■□□□ 1.25
RTCA-204ENST00000483474 POLRMTO00411 1230 aaKnown RBP22.83■■□□□ 1.25
RTCA-204ENST00000483474 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
RTCA-204ENST00000483474 A0A0G2JLW4 131 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 DDR1Q08345 913 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 NFIXQ14938 502 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 BICDL1Q6ZP65 573 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 DZIP3Q86Y13 1208 aaKnown RBP22.82■■□□□ 1.24
RTCA-204ENST00000483474 BABAM1Q9NWV8 329 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 WWC3Q9ULE0 1092 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 AFDNP55196 1824 aaKnown RBP22.82■■□□□ 1.24
RTCA-204ENST00000483474 UTRNP46939 3433 aa22.82■■□□□ 1.24
RTCA-204ENST00000483474 NPHP1O15259 732 aa22.81■■□□□ 1.24
RTCA-204ENST00000483474 ZNF652Q9Y2D9 606 aa22.81■■□□□ 1.24
RTCA-204ENST00000483474 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
RTCA-204ENST00000483474 PXDNLA1KZ92 1463 aa22.8■■□□□ 1.24
RTCA-204ENST00000483474 PRAMEF22A3QJZ6 481 aa22.8■■□□□ 1.24
RTCA-204ENST00000483474 ANP32CO43423 234 aa22.8■■□□□ 1.24
RTCA-204ENST00000483474 SERPINB2P05120 415 aa22.8■■□□□ 1.24
RTCA-204ENST00000483474 DPEP1P16444 411 aa22.8■■□□□ 1.24
RTCA-204ENST00000483474 EIF4A1P60842 406 aaKnown RBP22.8■■□□□ 1.24
RTCA-204ENST00000483474 BCS1LQ9Y276 419 aa22.8■■□□□ 1.24
RTCA-204ENST00000483474 RRP7AQ9Y3A4 280 aaKnown RBP22.8■■□□□ 1.24
RTCA-204ENST00000483474 GIGYF1O75420 1035 aaPredicted RBP22.79■■□□□ 1.24
RTCA-204ENST00000483474 SETDB2Q96T68 719 aa22.79■■□□□ 1.24
RTCA-204ENST00000483474 BCL2L12Q9HB09 334 aa22.79■■□□□ 1.24
RTCA-204ENST00000483474 PIM2Q9P1W9 311 aa22.79■■□□□ 1.24
RTCA-204ENST00000483474 SCN7AQ01118 1682 aa22.78■■□□□ 1.24
RTCA-204ENST00000483474 PIP4K2AP48426 406 aaPredicted RBP22.77■■□□□ 1.24
RTCA-204ENST00000483474 TBC1D9BQ66K14 1250 aa22.76■■□□□ 1.23
RTCA-204ENST00000483474 CLEC4GQ6UXB4 293 aa22.76■■□□□ 1.23
RTCA-204ENST00000483474 KIAA1551Q9HCM1 1747 aa22.76■■□□□ 1.23
RTCA-204ENST00000483474 CARMIL3Q8ND23 1372 aa22.76■■□□□ 1.23
RTCA-204ENST00000483474 CAMTA2O94983 1202 aa22.75■■□□□ 1.23
RTCA-204ENST00000483474 ZNF784Q8NCA9 323 aaPredicted RBP22.75■■□□□ 1.23
RTCA-204ENST00000483474 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
RTCA-204ENST00000483474 BRCA1P38398 1863 aaKnown RBP22.75■■□□□ 1.23
RTCA-204ENST00000483474 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
RTCA-204ENST00000483474 BCORQ6W2J9 1755 aa22.74■■□□□ 1.23
RTCA-204ENST00000483474 DALRD3Q5D0E6 543 aaKnown RBP22.74■■□□□ 1.23
RTCA-204ENST00000483474 RGL2O15211 777 aa22.73■■□□□ 1.23
RTCA-204ENST00000483474 PDZRN3Q9UPQ7 1066 aa22.73■■□□□ 1.23
RTCA-204ENST00000483474 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
RTCA-204ENST00000483474 NBPF26B4DH59 902 aa22.72■■□□□ 1.23
RTCA-204ENST00000483474 H0YIN7 160 aa22.72■■□□□ 1.23
RTCA-204ENST00000483474 ST5P78524 1137 aa22.72■■□□□ 1.23
RTCA-204ENST00000483474 CALD1Q05682 793 aaKnown RBP22.72■■□□□ 1.23
RTCA-204ENST00000483474 NBPF10Q6P3W6 841 aaKnown RBP22.72■■□□□ 1.23
RTCA-204ENST00000483474 KIF6Q6ZMV9 814 aa22.72■■□□□ 1.23
RTCA-204ENST00000483474 NBPF15Q8N660 670 aa22.72■■□□□ 1.23
RTCA-204ENST00000483474 CHRNA5P30532 468 aa22.71■■□□□ 1.23
RTCA-204ENST00000483474 PDE6BP35913 854 aa22.71■■□□□ 1.23
RTCA-204ENST00000483474 ARHGAP27Q6ZUM4 889 aa22.71■■□□□ 1.23
RTCA-204ENST00000483474 NGEFQ8N5V2 710 aa22.71■■□□□ 1.23
RTCA-204ENST00000483474 CNBD1Q8NA66 436 aa22.71■■□□□ 1.23
RTCA-204ENST00000483474 ERBB4Q15303 1308 aa22.71■■□□□ 1.23
RTCA-204ENST00000483474 APAF1O14727 1248 aa22.7■■□□□ 1.22
RTCA-204ENST00000483474 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
RTCA-204ENST00000483474 KCNA3P22001 575 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms