RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 C4AP0C0L4 1744 aa28.61■■■□□ 2.17
SYPL1-206ENST00000483448 HEG1Q9ULI3 1381 aa28.61■■■□□ 2.17
SYPL1-206ENST00000483448 DCTN1Q14203 1278 aa28.6■■■□□ 2.17
SYPL1-206ENST00000483448 NARFQ9UHQ1 456 aa28.6■■■□□ 2.17
SYPL1-206ENST00000483448 COL15A1P39059 1388 aa28.6■■■□□ 2.17
SYPL1-206ENST00000483448 KCNQ3O43525 872 aa28.59■■■□□ 2.17
SYPL1-206ENST00000483448 ZNF330Q9Y3S2 320 aaPredicted RBP28.59■■■□□ 2.17
SYPL1-206ENST00000483448 HTATSF1O43719 755 aaKnown RBP28.58■■■□□ 2.17
SYPL1-206ENST00000483448 DDR1Q08345 913 aa28.58■■■□□ 2.17
SYPL1-206ENST00000483448 RALBP1Q15311 655 aa28.58■■■□□ 2.17
SYPL1-206ENST00000483448 GOLGB1Q14789 3259 aaKnown RBP28.58■■■□□ 2.17
SYPL1-206ENST00000483448 A0A087WZG4 1122 aa28.57■■■□□ 2.16
SYPL1-206ENST00000483448 DPEP1P16444 411 aa28.57■■■□□ 2.16
SYPL1-206ENST00000483448 TM4SF1P30408 202 aa28.57■■■□□ 2.16
SYPL1-206ENST00000483448 NPM2Q86SE8 214 aaKnown RBP28.57■■■□□ 2.16
SYPL1-206ENST00000483448 BCS1LQ9Y276 419 aa28.57■■■□□ 2.16
SYPL1-206ENST00000483448 C10orf71Q711Q0 1435 aa28.57■■■□□ 2.16
SYPL1-206ENST00000483448 PNNQ9H307 717 aaKnown RBP28.56■■■□□ 2.16
SYPL1-206ENST00000483448 UBR2Q8IWV8 1755 aa28.55■■■□□ 2.16
SYPL1-206ENST00000483448 PXDNLA1KZ92 1463 aa28.55■■■□□ 2.16
SYPL1-206ENST00000483448 POLRMTO00411 1230 aaKnown RBP28.55■■■□□ 2.16
SYPL1-206ENST00000483448 A1BGP04217 495 aa28.54■■■□□ 2.16
SYPL1-206ENST00000483448 EIF5P55010 431 aaKnown RBP28.54■■■□□ 2.16
SYPL1-206ENST00000483448 NFIXQ14938 502 aa28.53■■■□□ 2.16
SYPL1-206ENST00000483448 SIPA1L3O60292 1781 aaPredicted RBP28.52■■■□□ 2.16
SYPL1-206ENST00000483448 TAF7Q15545 349 aaPredicted RBP28.52■■■□□ 2.16
SYPL1-206ENST00000483448 MAPK8IP3Q9UPT6 1336 aa28.51■■■□□ 2.15
SYPL1-206ENST00000483448 BICDL1Q6ZP65 573 aa28.51■■■□□ 2.15
SYPL1-206ENST00000483448 BCL2L12Q9HB09 334 aa28.51■■■□□ 2.15
SYPL1-206ENST00000483448 KIF13BQ9NQT8 1826 aa28.5■■■□□ 2.15
SYPL1-206ENST00000483448 N4BP2Q86UW6 1770 aaPredicted RBP28.5■■■□□ 2.15
SYPL1-206ENST00000483448 PLEKHF1Q96S99 279 aa28.5■■■□□ 2.15
SYPL1-206ENST00000483448 TBC1D2BQ9UPU7 963 aa28.5■■■□□ 2.15
SYPL1-206ENST00000483448 USP16Q9Y5T5 823 aa28.5■■■□□ 2.15
SYPL1-206ENST00000483448 SNRPA1P09661 255 aaKnown RBP28.49■■■□□ 2.15
SYPL1-206ENST00000483448 IL6STP40189 918 aaPredicted RBP28.49■■■□□ 2.15
SYPL1-206ENST00000483448 NFE2L2Q16236 605 aa28.49■■■□□ 2.15
SYPL1-206ENST00000483448 MIS18AQ9NYP9 233 aa28.49■■■□□ 2.15
SYPL1-206ENST00000483448 PIM2Q9P1W9 311 aa28.49■■■□□ 2.15
SYPL1-206ENST00000483448 SERPINB2P05120 415 aa28.48■■■□□ 2.15
SYPL1-206ENST00000483448 ARHGAP27Q6ZUM4 889 aa28.48■■■□□ 2.15
SYPL1-206ENST00000483448 KCNA3P22001 575 aa28.47■■■□□ 2.15
SYPL1-206ENST00000483448 PRAMEF22A3QJZ6 481 aa28.46■■■□□ 2.15
SYPL1-206ENST00000483448 CHRNA5P30532 468 aa28.46■■■□□ 2.15
SYPL1-206ENST00000483448 GIGYF1O75420 1035 aaPredicted RBP28.45■■■□□ 2.14
SYPL1-206ENST00000483448 PIP4K2AP48426 406 aaPredicted RBP28.45■■■□□ 2.14
SYPL1-206ENST00000483448 DALRD3Q5D0E6 543 aaKnown RBP28.44■■■□□ 2.14
SYPL1-206ENST00000483448 PNISRQ8TF01 805 aaKnown RBP28.44■■■□□ 2.14
SYPL1-206ENST00000483448 MYBBP1AQ9BQG0 1328 aaKnown RBP28.43■■■□□ 2.14
SYPL1-206ENST00000483448 TBC1D9BQ66K14 1250 aa28.43■■■□□ 2.14
SYPL1-206ENST00000483448 ZNF526Q8TF50 670 aaPredicted RBP28.43■■■□□ 2.14
SYPL1-206ENST00000483448 KIAA1551Q9HCM1 1747 aa28.43■■■□□ 2.14
SYPL1-206ENST00000483448 ATP10DQ9P241 1426 aa28.43■■■□□ 2.14
SYPL1-206ENST00000483448 DZIP3Q86Y13 1208 aaKnown RBP28.42■■■□□ 2.14
SYPL1-206ENST00000483448 THUMPD2Q9BTF0 503 aaKnown RBP28.42■■■□□ 2.14
SYPL1-206ENST00000483448 C1QTNF8P60827 252 aa28.4■■■□□ 2.14
SYPL1-206ENST00000483448 GPBP1L1Q9HC44 474 aaPredicted RBP28.4■■■□□ 2.14
SYPL1-206ENST00000483448 SETDB2Q96T68 719 aa28.39■■■□□ 2.14
SYPL1-206ENST00000483448 NPHP1O15259 732 aa28.38■■■□□ 2.13
SYPL1-206ENST00000483448 CAMTA2O94983 1202 aa28.38■■■□□ 2.13
SYPL1-206ENST00000483448 RIPK4P57078 832 aa28.38■■■□□ 2.13
SYPL1-206ENST00000483448 C2CD5Q86YS7 1000 aa28.37■■■□□ 2.13
SYPL1-206ENST00000483448 WDR43Q15061 677 aaKnown RBP eCLIP28.36■■■□□ 2.13
SYPL1-206ENST00000483448 H0YIN7 160 aa28.35■■■□□ 2.13
SYPL1-206ENST00000483448 DLG5Q8TDM6 1919 aa28.35■■■□□ 2.13
SYPL1-206ENST00000483448 ADCY9O60503 1353 aa28.35■■■□□ 2.13
SYPL1-206ENST00000483448 CCDC24Q8N4L8 307 aa28.34■■■□□ 2.13
SYPL1-206ENST00000483448 CARMIL3Q8ND23 1372 aa28.34■■■□□ 2.13
SYPL1-206ENST00000483448 AFDNP55196 1824 aaKnown RBP28.34■■■□□ 2.13
SYPL1-206ENST00000483448 NBPF26B4DH59 902 aa28.33■■■□□ 2.13
SYPL1-206ENST00000483448 NBPF10Q6P3W6 841 aaKnown RBP28.33■■■□□ 2.13
SYPL1-206ENST00000483448 CCDC146Q8IYE0 955 aa28.33■■■□□ 2.13
SYPL1-206ENST00000483448 NBPF15Q8N660 670 aa28.33■■■□□ 2.13
SYPL1-206ENST00000483448 ZNF652Q9Y2D9 606 aa28.33■■■□□ 2.13
SYPL1-206ENST00000483448 TMPOP42166 694 aaKnown RBP28.32■■■□□ 2.12
SYPL1-206ENST00000483448 EIF4A1P60842 406 aaKnown RBP28.32■■■□□ 2.12
SYPL1-206ENST00000483448 NEUROD2Q15784 382 aa28.32■■■□□ 2.12
SYPL1-206ENST00000483448 NGEFQ8N5V2 710 aa28.32■■■□□ 2.12
SYPL1-206ENST00000483448 PDE6BP35913 854 aa28.31■■■□□ 2.12
SYPL1-206ENST00000483448 LMOD3Q0VAK6 560 aa28.31■■■□□ 2.12
SYPL1-206ENST00000483448 PRR5LQ6MZQ0 368 aa28.31■■■□□ 2.12
SYPL1-206ENST00000483448 TTLL6Q8N841 843 aa28.31■■■□□ 2.12
SYPL1-206ENST00000483448 TSPYL4Q9UJ04 414 aa28.31■■■□□ 2.12
SYPL1-206ENST00000483448 RRP7AQ9Y3A4 280 aaKnown RBP28.31■■■□□ 2.12
SYPL1-206ENST00000483448 C9orf131Q5VYM1 1079 aa28.3■■■□□ 2.12
SYPL1-206ENST00000483448 CLEC4GQ6UXB4 293 aa28.3■■■□□ 2.12
SYPL1-206ENST00000483448 CNBD1Q8NA66 436 aa28.3■■■□□ 2.12
SYPL1-206ENST00000483448 ZNF622Q969S3 477 aaKnown RBP eCLIP28.3■■■□□ 2.12
SYPL1-206ENST00000483448 BRIP1Q9BX63 1249 aa28.3■■■□□ 2.12
SYPL1-206ENST00000483448 BRCA1P38398 1863 aaKnown RBP28.29■■■□□ 2.12
SYPL1-206ENST00000483448 NRXN2Q9P2S2 1712 aa28.29■■■□□ 2.12
SYPL1-206ENST00000483448 ZEB1P37275 1124 aaPredicted RBP28.29■■■□□ 2.12
SYPL1-206ENST00000483448 ST5P78524 1137 aa28.28■■■□□ 2.12
SYPL1-206ENST00000483448 PRKRIP1Q9H875 184 aaPredicted RBP28.28■■■□□ 2.12
SYPL1-206ENST00000483448 SCN7AQ01118 1682 aa28.28■■■□□ 2.12
SYPL1-206ENST00000483448 SENP3-EIF4A1A0A087X0R7 540 aa28.27■■■□□ 2.12
SYPL1-206ENST00000483448 NBPF5PQ86XG9 351 aaPredicted RBP28.27■■■□□ 2.12
SYPL1-206ENST00000483448 RUNDC1Q96C34 613 aa28.27■■■□□ 2.12
SYPL1-206ENST00000483448 PDZRN3Q9UPQ7 1066 aa28.27■■■□□ 2.12
SYPL1-206ENST00000483448 ARFGEF1Q9Y6D6 1849 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms