RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 PDCL2Q8N4E4 241 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 STK31Q9BXU1 1019 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 ANO2Q9NQ90 1003 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 TRIM6-TRIM34B2RNG4 842 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 BRD1O95696 1058 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 NLRP6P59044 892 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 FKBP5Q13451 457 aaPredicted RBP14.98□□□□□ -0.01
CCDC78-213ENST00000482878 LRSAM1Q6UWE0 723 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 HMGN5P82970 282 aaKnown RBP14.98□□□□□ -0.01
CCDC78-213ENST00000482878 CUL4AQ13619 759 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 UNC5CLQ8IV45 518 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC78-213ENST00000482878 EYA1Q99502 592 aa14.97□□□□□ -0.01
CCDC78-213ENST00000482878 TMEM51Q9NW97 253 aa14.97□□□□□ -0.01
CCDC78-213ENST00000482878 ATP8B2P98198 1209 aa14.97□□□□□ -0.01
CCDC78-213ENST00000482878 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
CCDC78-213ENST00000482878 TMEM2Q9UHN6 1383 aa14.97□□□□□ -0.01
CCDC78-213ENST00000482878 MCM2P49736 904 aa14.97□□□□□ -0.01
CCDC78-213ENST00000482878 ADAMTS13Q76LX8 1427 aa14.96□□□□□ -0.01
CCDC78-213ENST00000482878 ZNF710Q8N1W2 664 aa14.96□□□□□ -0.01
CCDC78-213ENST00000482878 C17orf53Q8N3J3 647 aaPredicted RBP14.96□□□□□ -0.01
CCDC78-213ENST00000482878 SSH2Q76I76 1423 aa14.96□□□□□ -0.01
CCDC78-213ENST00000482878 KDRP35968 1356 aa14.96□□□□□ -0.01
CCDC78-213ENST00000482878 GNAI3P08754 354 aa14.96□□□□□ -0.01
CCDC78-213ENST00000482878 IPO4Q8TEX9 1081 aaKnown RBP14.96□□□□□ -0.01
CCDC78-213ENST00000482878 UPF3BQ9BZI7 483 aaKnown RBP14.96□□□□□ -0.01
CCDC78-213ENST00000482878 IL25Q9H293 177 aa14.96□□□□□ -0.01
CCDC78-213ENST00000482878 LRRFIP2Q9Y608 721 aaKnown RBP14.96□□□□□ -0.01
CCDC78-213ENST00000482878 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.96□□□□□ -0.02
CCDC78-213ENST00000482878 MCCP23508 829 aa14.96□□□□□ -0.02
CCDC78-213ENST00000482878 RIMS1Q86UR5 1692 aaKnown RBP14.95□□□□□ -0.02
CCDC78-213ENST00000482878 ANAPC15P60006 121 aa14.95□□□□□ -0.02
CCDC78-213ENST00000482878 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
CCDC78-213ENST00000482878 STAP2Q9UGK3 403 aa14.95□□□□□ -0.02
CCDC78-213ENST00000482878 FLT4P35916 1363 aa14.95□□□□□ -0.02
CCDC78-213ENST00000482878 U2AF2P26368 475 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC78-213ENST00000482878 FOXD4L6Q3SYB3 417 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-213ENST00000482878 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 FOXD4L3Q6VB84 417 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-213ENST00000482878 AMOTL2Q9Y2J4 779 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 CEP170BQ9Y4F5 1589 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-213ENST00000482878 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 MBD3O95983 291 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 PRIMPOLQ96LW4 560 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 LTKP29376 864 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 CHAF1AQ13111 956 aaPredicted RBP14.94□□□□□ -0.02
CCDC78-213ENST00000482878 INTS4Q96HW7 963 aaKnown RBP14.94□□□□□ -0.02
CCDC78-213ENST00000482878 IL1RAPL2Q9NP60 686 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 TNRQ92752 1358 aa14.94□□□□□ -0.02
CCDC78-213ENST00000482878 DIP2BQ9P265 1576 aa14.93□□□□□ -0.02
CCDC78-213ENST00000482878 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
CCDC78-213ENST00000482878 NALCNQ8IZF0 1738 aa14.93□□□□□ -0.02
CCDC78-213ENST00000482878 GDPD2Q9HCC8 539 aa14.93□□□□□ -0.02
CCDC78-213ENST00000482878 TAF3Q5VWG9 929 aa14.92□□□□□ -0.02
CCDC78-213ENST00000482878 BCL2L12Q9HB09 334 aa14.92□□□□□ -0.02
CCDC78-213ENST00000482878 TOPAZ1Q8N9V7 1692 aa14.92□□□□□ -0.02
CCDC78-213ENST00000482878 NOLC1Q14978 699 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC78-213ENST00000482878 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-213ENST00000482878 NUTM1Q86Y26 1132 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 ABTB2Q8N961 1025 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 SRCIN1Q9C0H9 1055 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 TTC21AQ8NDW8 1320 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 GNAT3A8MTJ3 354 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 IL17REQ8NFR9 667 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 IL17RAQ96F46 866 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
CCDC78-213ENST00000482878 GADD45BO75293 160 aaPredicted RBP14.91□□□□□ -0.02
CCDC78-213ENST00000482878 MAP4K4O95819 1239 aaPredicted RBP14.91□□□□□ -0.02
CCDC78-213ENST00000482878 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
CCDC78-213ENST00000482878 KCNJ4P48050 445 aa14.91□□□□□ -0.02
CCDC78-213ENST00000482878 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
CCDC78-213ENST00000482878 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
CCDC78-213ENST00000482878 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
CCDC78-213ENST00000482878 AEBP2Q6ZN18 517 aaPredicted RBP14.9□□□□□ -0.02
CCDC78-213ENST00000482878 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
CCDC78-213ENST00000482878 TSPY26PQ9H489 355 aa14.9□□□□□ -0.02
CCDC78-213ENST00000482878 SOS1Q07889 1333 aaPredicted RBP14.9□□□□□ -0.02
CCDC78-213ENST00000482878 HSPA4P34932 840 aa14.89□□□□□ -0.03
CCDC78-213ENST00000482878 PHAXQ9H814 394 aaKnown RBP14.89□□□□□ -0.03
CCDC78-213ENST00000482878 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
CCDC78-213ENST00000482878 CHMP4AQ9BY43 222 aa14.89□□□□□ -0.03
CCDC78-213ENST00000482878 A0A0G2JS52 829 aa14.88□□□□□ -0.03
CCDC78-213ENST00000482878 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
CCDC78-213ENST00000482878 PPP1R42Q7Z4L9 355 aa14.88□□□□□ -0.03
CCDC78-213ENST00000482878 AOX1Q06278 1338 aa14.87□□□□□ -0.03
CCDC78-213ENST00000482878 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
CCDC78-213ENST00000482878 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
CCDC78-213ENST00000482878 USP25Q9UHP3 1055 aa14.87□□□□□ -0.03
CCDC78-213ENST00000482878 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
CCDC78-213ENST00000482878 PLEKHG1Q9ULL1 1385 aa14.87□□□□□ -0.03
CCDC78-213ENST00000482878 TAF7Q15545 349 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-213ENST00000482878 PI4K2BQ8TCG2 481 aa14.87□□□□□ -0.03
CCDC78-213ENST00000482878 XRN1Q8IZH2 1706 aaKnown RBP14.87□□□□□ -0.03
CCDC78-213ENST00000482878 HDGFL1Q5TGJ6 251 aa14.86□□□□□ -0.03
CCDC78-213ENST00000482878 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
CCDC78-213ENST00000482878 LARP6Q9BRS8 491 aaKnown RBP14.86□□□□□ -0.03
CCDC78-213ENST00000482878 WDR33Q9C0J8 1336 aaKnown RBP14.86□□□□□ -0.03
CCDC78-213ENST00000482878 HOXC9P31274 260 aa14.86□□□□□ -0.03
CCDC78-213ENST00000482878 PSME1Q06323 249 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms