RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 PDGFDQ9GZP0 370 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
SPTLC1-206ENST00000482632 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
SPTLC1-206ENST00000482632 TJP1Q07157 1748 aa13.17□□□□□ -0.3
SPTLC1-206ENST00000482632 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
SPTLC1-206ENST00000482632 ITPK1Q13572 414 aa13.17□□□□□ -0.3
SPTLC1-206ENST00000482632 BTBD11A6QL63 1104 aa13.16□□□□□ -0.3
SPTLC1-206ENST00000482632 GNPATO15228 680 aa13.16□□□□□ -0.3
SPTLC1-206ENST00000482632 RIPK4P57078 832 aa13.16□□□□□ -0.3
SPTLC1-206ENST00000482632 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
SPTLC1-206ENST00000482632 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1-206ENST00000482632 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
SPTLC1-206ENST00000482632 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 ZNF831Q5JPB2 1677 aa13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 SPON1Q9HCB6 807 aa13.15□□□□□ -0.3
SPTLC1-206ENST00000482632 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
SPTLC1-206ENST00000482632 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
SPTLC1-206ENST00000482632 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
SPTLC1-206ENST00000482632 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
SPTLC1-206ENST00000482632 CEMIPQ8WUJ3 1361 aa13.14□□□□□ -0.31
SPTLC1-206ENST00000482632 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
SPTLC1-206ENST00000482632 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
SPTLC1-206ENST00000482632 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
SPTLC1-206ENST00000482632 DNAJC10Q8IXB1 793 aa13.13□□□□□ -0.31
SPTLC1-206ENST00000482632 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
SPTLC1-206ENST00000482632 KCNQ3O43525 872 aa13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 MSL1Q68DK7 614 aa13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 CEP350Q5VT06 3117 aa13.12□□□□□ -0.31
SPTLC1-206ENST00000482632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 APAF1O14727 1248 aa13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 NUBP1P53384 320 aa13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 KDM3BQ7LBC6 1761 aa13.11□□□□□ -0.31
SPTLC1-206ENST00000482632 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 GABBR2O75899 941 aa13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 SSFA2P28290 1259 aa13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
SPTLC1-206ENST00000482632 POLD1P28340 1107 aa13.09□□□□□ -0.31
SPTLC1-206ENST00000482632 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
SPTLC1-206ENST00000482632 ARXQ96QS3 562 aa13.09□□□□□ -0.31
SPTLC1-206ENST00000482632 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
SPTLC1-206ENST00000482632 TSPYL4Q9UJ04 414 aa13.09□□□□□ -0.31
SPTLC1-206ENST00000482632 STARD3NLO95772 234 aa13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 RFC4P35249 363 aa13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 GSE1Q14687 1217 aa13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
SPTLC1-206ENST00000482632 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
SPTLC1-206ENST00000482632 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
SPTLC1-206ENST00000482632 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
SPTLC1-206ENST00000482632 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
SPTLC1-206ENST00000482632 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
SPTLC1-206ENST00000482632 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
SPTLC1-206ENST00000482632 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-206ENST00000482632 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1-206ENST00000482632 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 PTGER2P43116 358 aa13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 COL15A1P39059 1388 aa13.05□□□□□ -0.32
SPTLC1-206ENST00000482632 ZPR1O75312 459 aa13.04□□□□□ -0.32
SPTLC1-206ENST00000482632 A1BGP04217 495 aa13.04□□□□□ -0.32
SPTLC1-206ENST00000482632 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
SPTLC1-206ENST00000482632 C1QTNF8P60827 252 aa13.03□□□□□ -0.32
SPTLC1-206ENST00000482632 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
SPTLC1-206ENST00000482632 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
SPTLC1-206ENST00000482632 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
SPTLC1-206ENST00000482632 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms