RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 NUCB2P80303 420 aa18.22■□□□□ 0.51
ATG4B-220ENST00000482507 CHAMP1Q96JM3 812 aa18.22■□□□□ 0.51
ATG4B-220ENST00000482507 STK31Q9BXU1 1019 aa18.22■□□□□ 0.51
ATG4B-220ENST00000482507 LMBRD1Q9NUN5 540 aa18.22■□□□□ 0.51
ATG4B-220ENST00000482507 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
ATG4B-220ENST00000482507 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-220ENST00000482507 ST18O60284 1047 aa18.22■□□□□ 0.51
ATG4B-220ENST00000482507 FKBP5Q13451 457 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-220ENST00000482507 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
ATG4B-220ENST00000482507 CPDO75976 1380 aa18.21■□□□□ 0.51
ATG4B-220ENST00000482507 PHRF1Q9P1Y6 1649 aaKnown RBP18.21■□□□□ 0.51
ATG4B-220ENST00000482507 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.51
ATG4B-220ENST00000482507 HSPA1LP34931 641 aa18.21■□□□□ 0.51
ATG4B-220ENST00000482507 BTG4Q9NY30 223 aa18.2■□□□□ 0.5
ATG4B-220ENST00000482507 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
ATG4B-220ENST00000482507 ATP8B2P98198 1209 aa18.2■□□□□ 0.5
ATG4B-220ENST00000482507 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
ATG4B-220ENST00000482507 ESPNB1AK53 854 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
ATG4B-220ENST00000482507 EVA1CP58658 441 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 ESYT1Q9BSJ8 1104 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 CWC22Q9HCG8 908 aaKnown RBP18.19■□□□□ 0.5
ATG4B-220ENST00000482507 PALD1Q9ULE6 856 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
ATG4B-220ENST00000482507 PHLPP1O60346 1717 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 MX1P20591 662 aa18.19■□□□□ 0.5
ATG4B-220ENST00000482507 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
ATG4B-220ENST00000482507 IBTKQ9P2D0 1353 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-220ENST00000482507 UNC5CLQ8IV45 518 aa18.18■□□□□ 0.5
ATG4B-220ENST00000482507 GNAI3P08754 354 aa18.18■□□□□ 0.5
ATG4B-220ENST00000482507 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
ATG4B-220ENST00000482507 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
ATG4B-220ENST00000482507 COL16A1Q07092 1604 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-220ENST00000482507 CRYBG1Q9Y4K1 1723 aa18.17■□□□□ 0.5
ATG4B-220ENST00000482507 NEK4P51957 841 aa18.17■□□□□ 0.5
ATG4B-220ENST00000482507 CAVIN1Q6NZI2 390 aaKnown RBP18.17■□□□□ 0.5
ATG4B-220ENST00000482507 USP44Q9H0E7 712 aa18.17■□□□□ 0.5
ATG4B-220ENST00000482507 RGPD5Q99666 1765 aa18.17■□□□□ 0.5
ATG4B-220ENST00000482507 CHMLP26374 656 aa18.17■□□□□ 0.5
ATG4B-220ENST00000482507 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
ATG4B-220ENST00000482507 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
ATG4B-220ENST00000482507 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
ATG4B-220ENST00000482507 IL25Q9H293 177 aa18.16■□□□□ 0.5
ATG4B-220ENST00000482507 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-220ENST00000482507 ZSCAN23Q3MJ62 389 aa18.15■□□□□ 0.5
ATG4B-220ENST00000482507 PRPF40AO75400 957 aaKnown RBP18.15■□□□□ 0.5
ATG4B-220ENST00000482507 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
ATG4B-220ENST00000482507 ZNF445P59923 1031 aa18.15■□□□□ 0.5
ATG4B-220ENST00000482507 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
ATG4B-220ENST00000482507 PHAXQ9H814 394 aaKnown RBP18.15■□□□□ 0.5
ATG4B-220ENST00000482507 STAP2Q9UGK3 403 aa18.14■□□□□ 0.5
ATG4B-220ENST00000482507 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.49
ATG4B-220ENST00000482507 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-220ENST00000482507 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-220ENST00000482507 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-220ENST00000482507 RBM27Q9P2N5 1060 aaKnown RBP18.14■□□□□ 0.49
ATG4B-220ENST00000482507 COL18A1P39060 1754 aa18.14■□□□□ 0.49
ATG4B-220ENST00000482507 TRIM6-TRIM34B2RNG4 842 aa18.13■□□□□ 0.49
ATG4B-220ENST00000482507 PPP1R9BQ96SB3 815 aa18.13■□□□□ 0.49
ATG4B-220ENST00000482507 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
ATG4B-220ENST00000482507 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
ATG4B-220ENST00000482507 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
ATG4B-220ENST00000482507 TRIM44Q96DX7 344 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-220ENST00000482507 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
ATG4B-220ENST00000482507 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
ATG4B-220ENST00000482507 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-220ENST00000482507 COL5A2P05997 1499 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-220ENST00000482507 CCDC173Q0VFZ6 552 aa18.11■□□□□ 0.49
ATG4B-220ENST00000482507 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
ATG4B-220ENST00000482507 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
ATG4B-220ENST00000482507 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
ATG4B-220ENST00000482507 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
ATG4B-220ENST00000482507 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-220ENST00000482507 RBSNQ9H1K0 784 aa18.11■□□□□ 0.49
ATG4B-220ENST00000482507 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
ATG4B-220ENST00000482507 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-220ENST00000482507 CUL4AQ13619 759 aa18.1■□□□□ 0.49
ATG4B-220ENST00000482507 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
ATG4B-220ENST00000482507 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
ATG4B-220ENST00000482507 JCADQ9P266 1359 aa18.1■□□□□ 0.49
ATG4B-220ENST00000482507 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-220ENST00000482507 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
ATG4B-220ENST00000482507 ZNF530Q6P9A1 599 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-220ENST00000482507 UPF3BQ9BZI7 483 aaKnown RBP18.09■□□□□ 0.49
ATG4B-220ENST00000482507 MAP4K4O95819 1239 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-220ENST00000482507 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-220ENST00000482507 MPRIPQ6WCQ1 1025 aa18.09■□□□□ 0.49
ATG4B-220ENST00000482507 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
ATG4B-220ENST00000482507 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
ATG4B-220ENST00000482507 BABAM1Q9NWV8 329 aa18.09■□□□□ 0.49
ATG4B-220ENST00000482507 TMEM63CQ9P1W3 806 aa18.09■□□□□ 0.49
ATG4B-220ENST00000482507 BRD1O95696 1058 aa18.08■□□□□ 0.49
ATG4B-220ENST00000482507 IL17RAQ96F46 866 aa18.08■□□□□ 0.49
ATG4B-220ENST00000482507 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-220ENST00000482507 ANAPC15P60006 121 aa18.08■□□□□ 0.48
ATG4B-220ENST00000482507 POLA2Q14181 598 aa18.08■□□□□ 0.48
ATG4B-220ENST00000482507 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
ATG4B-220ENST00000482507 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.48
ATG4B-220ENST00000482507 CACNA1FO60840 1977 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms