RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 KCNQ3O43525 872 aa15.71■□□□□ 0.11
HMGN1-213ENST00000482192 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
HMGN1-213ENST00000482192 ZPR1O75312 459 aa15.7■□□□□ 0.1
HMGN1-213ENST00000482192 CANXP27824 592 aaKnown RBP15.7■□□□□ 0.1
HMGN1-213ENST00000482192 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
HMGN1-213ENST00000482192 TAF7Q15545 349 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-213ENST00000482192 YY1P25490 414 aa15.69■□□□□ 0.1
HMGN1-213ENST00000482192 FKBP8Q14318 412 aa15.69■□□□□ 0.1
HMGN1-213ENST00000482192 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
HMGN1-213ENST00000482192 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
HMGN1-213ENST00000482192 NARFQ9UHQ1 456 aa15.69■□□□□ 0.1
HMGN1-213ENST00000482192 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
HMGN1-213ENST00000482192 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-213ENST00000482192 SNRPA1P09661 255 aaKnown RBP15.68■□□□□ 0.1
HMGN1-213ENST00000482192 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
HMGN1-213ENST00000482192 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
HMGN1-213ENST00000482192 DLG5Q8TDM6 1919 aa15.67■□□□□ 0.1
HMGN1-213ENST00000482192 A0A087WZG4 1122 aa15.67■□□□□ 0.1
HMGN1-213ENST00000482192 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
HMGN1-213ENST00000482192 IL6STP40189 918 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-213ENST00000482192 RIPK4P57078 832 aa15.66■□□□□ 0.1
HMGN1-213ENST00000482192 LMOD3Q0VAK6 560 aa15.66■□□□□ 0.1
HMGN1-213ENST00000482192 THUMPD2Q9BTF0 503 aaKnown RBP15.66■□□□□ 0.1
HMGN1-213ENST00000482192 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 A1BGP04217 495 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 YBX3P16989 372 aaKnown RBP eCLIP15.65■□□□□ 0.1
HMGN1-213ENST00000482192 TMPOP42166 694 aaKnown RBP15.65■□□□□ 0.1
HMGN1-213ENST00000482192 DDR1Q08345 913 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
HMGN1-213ENST00000482192 CCDC146Q8IYE0 955 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 RUNDC1Q96C34 613 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 MIS18AQ9NYP9 233 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
HMGN1-213ENST00000482192 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
HMGN1-213ENST00000482192 TM4SF1P30408 202 aa15.64■□□□□ 0.09
HMGN1-213ENST00000482192 TGFB2P61812 414 aa15.64■□□□□ 0.09
HMGN1-213ENST00000482192 ADAMTS8Q9UP79 889 aa15.64■□□□□ 0.09
HMGN1-213ENST00000482192 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
HMGN1-213ENST00000482192 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
HMGN1-213ENST00000482192 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
HMGN1-213ENST00000482192 PRAMEF22A3QJZ6 481 aa15.63■□□□□ 0.09
HMGN1-213ENST00000482192 POLRMTO00411 1230 aaKnown RBP15.63■□□□□ 0.09
HMGN1-213ENST00000482192 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
HMGN1-213ENST00000482192 NFIXQ14938 502 aa15.62■□□□□ 0.09
HMGN1-213ENST00000482192 RRP7AQ9Y3A4 280 aaKnown RBP15.62■□□□□ 0.09
HMGN1-213ENST00000482192 SCN7AQ01118 1682 aa15.62■□□□□ 0.09
HMGN1-213ENST00000482192 EIF4A1P60842 406 aaKnown RBP15.61■□□□□ 0.09
HMGN1-213ENST00000482192 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
HMGN1-213ENST00000482192 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
HMGN1-213ENST00000482192 LAMB4A4D0S4 1761 aa15.61■□□□□ 0.09
HMGN1-213ENST00000482192 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
HMGN1-213ENST00000482192 GIGYF1O75420 1035 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-213ENST00000482192 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
HMGN1-213ENST00000482192 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
HMGN1-213ENST00000482192 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
HMGN1-213ENST00000482192 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-213ENST00000482192 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
HMGN1-213ENST00000482192 WWC3Q9ULE0 1092 aa15.59■□□□□ 0.09
HMGN1-213ENST00000482192 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
HMGN1-213ENST00000482192 ANP32CO43423 234 aa15.58■□□□□ 0.08
HMGN1-213ENST00000482192 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
HMGN1-213ENST00000482192 SERPINB2P05120 415 aa15.58■□□□□ 0.08
HMGN1-213ENST00000482192 DPEP1P16444 411 aa15.58■□□□□ 0.08
HMGN1-213ENST00000482192 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
HMGN1-213ENST00000482192 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
HMGN1-213ENST00000482192 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
HMGN1-213ENST00000482192 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
HMGN1-213ENST00000482192 BICDL1Q6ZP65 573 aa15.57■□□□□ 0.08
HMGN1-213ENST00000482192 TRIM35Q9UPQ4 493 aa15.57■□□□□ 0.08
HMGN1-213ENST00000482192 CARMIL3Q8ND23 1372 aa15.57■□□□□ 0.08
HMGN1-213ENST00000482192 BCORQ6W2J9 1755 aa15.57■□□□□ 0.08
HMGN1-213ENST00000482192 N4BP2Q86UW6 1770 aaPredicted RBP15.57■□□□□ 0.08
HMGN1-213ENST00000482192 RGL2O15211 777 aa15.56■□□□□ 0.08
HMGN1-213ENST00000482192 ZNF652Q9Y2D9 606 aa15.56■□□□□ 0.08
HMGN1-213ENST00000482192 CHD4Q14839 1912 aa15.56■□□□□ 0.08
HMGN1-213ENST00000482192 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
HMGN1-213ENST00000482192 CLEC4GQ6UXB4 293 aa15.55■□□□□ 0.08
HMGN1-213ENST00000482192 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
HMGN1-213ENST00000482192 PIM2Q9P1W9 311 aa15.55■□□□□ 0.08
HMGN1-213ENST00000482192 BCS1LQ9Y276 419 aa15.55■□□□□ 0.08
HMGN1-213ENST00000482192 CHL1O00533 1208 aa15.54■□□□□ 0.08
HMGN1-213ENST00000482192 APAF1O14727 1248 aa15.54■□□□□ 0.08
HMGN1-213ENST00000482192 KCNA3P22001 575 aa15.54■□□□□ 0.08
HMGN1-213ENST00000482192 CCDC184Q52MB2 194 aa15.54■□□□□ 0.08
HMGN1-213ENST00000482192 ZNF784Q8NCA9 323 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-213ENST00000482192 AFDNP55196 1824 aaKnown RBP15.53■□□□□ 0.08
HMGN1-213ENST00000482192 CHRNA5P30532 468 aa15.53■□□□□ 0.08
HMGN1-213ENST00000482192 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
HMGN1-213ENST00000482192 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.08
HMGN1-213ENST00000482192 CNBD1Q8NA66 436 aa15.52■□□□□ 0.08
HMGN1-213ENST00000482192 MRS2Q9HD23 443 aa15.52■□□□□ 0.08
HMGN1-213ENST00000482192 BRCA1P38398 1863 aaKnown RBP15.52■□□□□ 0.07
HMGN1-213ENST00000482192 NPHP1O15259 732 aa15.51■□□□□ 0.07
HMGN1-213ENST00000482192 MYL6BP14649 208 aa15.51■□□□□ 0.07
HMGN1-213ENST00000482192 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
HMGN1-213ENST00000482192 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
HMGN1-213ENST00000482192 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
HMGN1-213ENST00000482192 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
HMGN1-213ENST00000482192 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
HMGN1-213ENST00000482192 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms