RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
LINC00544-202ENST00000481738 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
LINC00544-202ENST00000481738 YY1P25490 414 aa11.9□□□□□ -0.5
LINC00544-202ENST00000481738 TEX13AQ9BXU3 409 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-202ENST00000481738 COL15A1P39059 1388 aa11.9□□□□□ -0.5
LINC00544-202ENST00000481738 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
LINC00544-202ENST00000481738 ZPR1O75312 459 aa11.89□□□□□ -0.51
LINC00544-202ENST00000481738 FKBP8Q14318 412 aa11.89□□□□□ -0.51
LINC00544-202ENST00000481738 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
LINC00544-202ENST00000481738 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
LINC00544-202ENST00000481738 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
LINC00544-202ENST00000481738 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
LINC00544-202ENST00000481738 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
LINC00544-202ENST00000481738 WDR43Q15061 677 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00544-202ENST00000481738 CCDC146Q8IYE0 955 aa11.88□□□□□ -0.51
LINC00544-202ENST00000481738 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
LINC00544-202ENST00000481738 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
LINC00544-202ENST00000481738 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
LINC00544-202ENST00000481738 A1BGP04217 495 aa11.87□□□□□ -0.51
LINC00544-202ENST00000481738 SNRPA1P09661 255 aaKnown RBP11.87□□□□□ -0.51
LINC00544-202ENST00000481738 YBX3P16989 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00544-202ENST00000481738 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
LINC00544-202ENST00000481738 RIPK4P57078 832 aa11.87□□□□□ -0.51
LINC00544-202ENST00000481738 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
LINC00544-202ENST00000481738 USP16Q9Y5T5 823 aa11.87□□□□□ -0.51
LINC00544-202ENST00000481738 A0A087WZG4 1122 aa11.86□□□□□ -0.51
LINC00544-202ENST00000481738 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
LINC00544-202ENST00000481738 DDR1Q08345 913 aa11.86□□□□□ -0.51
LINC00544-202ENST00000481738 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
LINC00544-202ENST00000481738 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
LINC00544-202ENST00000481738 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
LINC00544-202ENST00000481738 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 TM4SF1P30408 202 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 IL6STP40189 918 aaPredicted RBP11.85□□□□□ -0.51
LINC00544-202ENST00000481738 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
LINC00544-202ENST00000481738 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 RUNDC1Q96C34 613 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
LINC00544-202ENST00000481738 CHD4Q14839 1912 aa11.84□□□□□ -0.51
LINC00544-202ENST00000481738 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
LINC00544-202ENST00000481738 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
LINC00544-202ENST00000481738 GRIN3BO60391 1043 aa11.84□□□□□ -0.51
LINC00544-202ENST00000481738 TGFB2P61812 414 aa11.84□□□□□ -0.51
LINC00544-202ENST00000481738 NFIXQ14938 502 aa11.84□□□□□ -0.51
LINC00544-202ENST00000481738 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
LINC00544-202ENST00000481738 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
LINC00544-202ENST00000481738 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
LINC00544-202ENST00000481738 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
LINC00544-202ENST00000481738 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
LINC00544-202ENST00000481738 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
LINC00544-202ENST00000481738 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
LINC00544-202ENST00000481738 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
LINC00544-202ENST00000481738 SERPINB2P05120 415 aa11.82□□□□□ -0.52
LINC00544-202ENST00000481738 DPEP1P16444 411 aa11.82□□□□□ -0.52
LINC00544-202ENST00000481738 DZIP3Q86Y13 1208 aaKnown RBP11.82□□□□□ -0.52
LINC00544-202ENST00000481738 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
LINC00544-202ENST00000481738 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
LINC00544-202ENST00000481738 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
LINC00544-202ENST00000481738 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
LINC00544-202ENST00000481738 CAMTA2O94983 1202 aa11.81□□□□□ -0.52
LINC00544-202ENST00000481738 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
LINC00544-202ENST00000481738 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
LINC00544-202ENST00000481738 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
LINC00544-202ENST00000481738 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
LINC00544-202ENST00000481738 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
LINC00544-202ENST00000481738 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
LINC00544-202ENST00000481738 BCS1LQ9Y276 419 aa11.8□□□□□ -0.52
LINC00544-202ENST00000481738 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
LINC00544-202ENST00000481738 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
LINC00544-202ENST00000481738 ANP32CO43423 234 aa11.79□□□□□ -0.52
LINC00544-202ENST00000481738 CHRNA5P30532 468 aa11.79□□□□□ -0.52
LINC00544-202ENST00000481738 APAF1O14727 1248 aa11.78□□□□□ -0.52
LINC00544-202ENST00000481738 KCNA3P22001 575 aa11.78□□□□□ -0.52
LINC00544-202ENST00000481738 NGEFQ8N5V2 710 aa11.78□□□□□ -0.52
LINC00544-202ENST00000481738 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
LINC00544-202ENST00000481738 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
LINC00544-202ENST00000481738 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
LINC00544-202ENST00000481738 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
LINC00544-202ENST00000481738 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
LINC00544-202ENST00000481738 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
LINC00544-202ENST00000481738 MYL6BP14649 208 aa11.77□□□□□ -0.53
LINC00544-202ENST00000481738 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
LINC00544-202ENST00000481738 SETDB2Q96T68 719 aa11.77□□□□□ -0.53
LINC00544-202ENST00000481738 CHL1O00533 1208 aa11.76□□□□□ -0.53
LINC00544-202ENST00000481738 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
LINC00544-202ENST00000481738 PRR5LQ6MZQ0 368 aa11.76□□□□□ -0.53
LINC00544-202ENST00000481738 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
LINC00544-202ENST00000481738 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
LINC00544-202ENST00000481738 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
LINC00544-202ENST00000481738 NPHP1O15259 732 aa11.75□□□□□ -0.53
LINC00544-202ENST00000481738 HLFQ16534 295 aa11.75□□□□□ -0.53
LINC00544-202ENST00000481738 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
LINC00544-202ENST00000481738 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
LINC00544-202ENST00000481738 ARHGAP27Q6ZUM4 889 aa11.75□□□□□ -0.53
LINC00544-202ENST00000481738 C2CD5Q86YS7 1000 aa11.75□□□□□ -0.53
LINC00544-202ENST00000481738 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
LINC00544-202ENST00000481738 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms