RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 CAMKK2Q96RR4 588 aa29.65■■■□□ 2.34
SHISA4-203ENST00000481699 RGPD3A6NKT7 1758 aaPredicted RBP29.64■■■□□ 2.34
SHISA4-203ENST00000481699 RGPD4Q7Z3J3 1758 aa29.64■■■□□ 2.34
SHISA4-203ENST00000481699 CYP19A1P11511 503 aaPredicted RBP29.64■■■□□ 2.34
SHISA4-203ENST00000481699 ZNF831Q5JPB2 1677 aa29.63■■■□□ 2.33
SHISA4-203ENST00000481699 LINC00116Q8NCU8 138 aa29.63■■■□□ 2.33
SHISA4-203ENST00000481699 LRRC4BQ9NT99 713 aa29.63■■■□□ 2.33
SHISA4-203ENST00000481699 C5P01031 1676 aa29.63■■■□□ 2.33
SHISA4-203ENST00000481699 TJP1Q07157 1748 aa29.62■■■□□ 2.33
SHISA4-203ENST00000481699 CENPBP07199 599 aaPredicted RBP29.62■■■□□ 2.33
SHISA4-203ENST00000481699 PROM2Q8N271 834 aa29.62■■■□□ 2.33
SHISA4-203ENST00000481699 CCDC87Q9NVE4 849 aa29.62■■■□□ 2.33
SHISA4-203ENST00000481699 CRKLP46109 303 aaKnown RBP29.61■■■□□ 2.33
SHISA4-203ENST00000481699 NPM2Q86SE8 214 aaKnown RBP29.61■■■□□ 2.33
SHISA4-203ENST00000481699 ERBB4Q15303 1308 aa29.61■■■□□ 2.33
SHISA4-203ENST00000481699 LAMB4A4D0S4 1761 aa29.61■■■□□ 2.33
SHISA4-203ENST00000481699 TCERG1O14776 1098 aaKnown RBP29.6■■■□□ 2.33
SHISA4-203ENST00000481699 AK7Q96M32 723 aa29.6■■■□□ 2.33
SHISA4-203ENST00000481699 DBF4Q9UBU7 674 aaPredicted RBP29.6■■■□□ 2.33
SHISA4-203ENST00000481699 CICQ96RK0 1608 aaPredicted RBP29.6■■■□□ 2.33
SHISA4-203ENST00000481699 A1BGP04217 495 aa29.59■■■□□ 2.33
SHISA4-203ENST00000481699 CHPF2Q9P2E5 772 aa29.59■■■□□ 2.33
SHISA4-203ENST00000481699 CNTNAP4Q9C0A0 1308 aa29.59■■■□□ 2.33
SHISA4-203ENST00000481699 CANXP27824 592 aaKnown RBP29.58■■■□□ 2.33
SHISA4-203ENST00000481699 ALDH1L2Q3SY69 923 aa29.58■■■□□ 2.33
SHISA4-203ENST00000481699 SMC4Q9NTJ3 1288 aa29.58■■■□□ 2.33
SHISA4-203ENST00000481699 MYL6BP14649 208 aa29.57■■■□□ 2.32
SHISA4-203ENST00000481699 RC3H1Q5TC82 1133 aaKnown RBP29.57■■■□□ 2.32
SHISA4-203ENST00000481699 DDX21Q9NR30 783 aaKnown RBP eCLIP29.57■■■□□ 2.32
SHISA4-203ENST00000481699 RCAN3Q9UKA8 241 aa29.57■■■□□ 2.32
SHISA4-203ENST00000481699 ZNF330Q9Y3S2 320 aaPredicted RBP29.57■■■□□ 2.32
SHISA4-203ENST00000481699 RARSP54136 660 aaKnown RBP29.56■■■□□ 2.32
SHISA4-203ENST00000481699 SLC4A2P04920 1241 aa29.55■■■□□ 2.32
SHISA4-203ENST00000481699 HYPKQ9NX55 129 aa29.55■■■□□ 2.32
SHISA4-203ENST00000481699 ZBTB1Q9Y2K1 713 aa29.55■■■□□ 2.32
SHISA4-203ENST00000481699 GNPATO15228 680 aa29.54■■■□□ 2.32
SHISA4-203ENST00000481699 PIP4K2AP48426 406 aaPredicted RBP29.54■■■□□ 2.32
SHISA4-203ENST00000481699 INTS5Q6P9B9 1019 aaKnown RBP29.54■■■□□ 2.32
SHISA4-203ENST00000481699 SSH1Q8WYL5 1049 aa29.54■■■□□ 2.32
SHISA4-203ENST00000481699 BCL2L13Q9BXK5 485 aa29.54■■■□□ 2.32
SHISA4-203ENST00000481699 COL5A3P25940 1745 aaPredicted RBP29.53■■■□□ 2.32
SHISA4-203ENST00000481699 C4BP0C0L5 1744 aa29.52■■■□□ 2.32
SHISA4-203ENST00000481699 STK32BQ9NY57 414 aa29.52■■■□□ 2.32
SHISA4-203ENST00000481699 RTCBQ9Y3I0 505 aaKnown RBP29.52■■■□□ 2.32
SHISA4-203ENST00000481699 NBPF26B4DH59 902 aa29.51■■■□□ 2.31
SHISA4-203ENST00000481699 ANXA1P04083 346 aa29.51■■■□□ 2.31
SHISA4-203ENST00000481699 IL6STP40189 918 aaPredicted RBP29.51■■■□□ 2.31
SHISA4-203ENST00000481699 NBPF14Q5TI25 921 aa29.51■■■□□ 2.31
SHISA4-203ENST00000481699 NBPF10Q6P3W6 841 aaKnown RBP29.51■■■□□ 2.31
SHISA4-203ENST00000481699 NBPF15Q8N660 670 aa29.51■■■□□ 2.31
SHISA4-203ENST00000481699 ARXQ96QS3 562 aa29.51■■■□□ 2.31
SHISA4-203ENST00000481699 TAF1LQ8IZX4 1826 aa29.5■■■□□ 2.31
SHISA4-203ENST00000481699 RPS6KA4O75676 772 aa29.5■■■□□ 2.31
SHISA4-203ENST00000481699 PROSER3Q2NL68 480 aa29.5■■■□□ 2.31
SHISA4-203ENST00000481699 TFCP2L1Q9NZI6 479 aa29.5■■■□□ 2.31
SHISA4-203ENST00000481699 PDIA6Q15084 440 aa29.49■■■□□ 2.31
SHISA4-203ENST00000481699 MRPL50Q8N5N7 158 aaKnown RBP29.49■■■□□ 2.31
SHISA4-203ENST00000481699 RREB1Q92766 1687 aa29.48■■■□□ 2.31
SHISA4-203ENST00000481699 A0A087WZG4 1122 aa29.47■■■□□ 2.31
SHISA4-203ENST00000481699 AIMP1Q12904 312 aaKnown RBP29.47■■■□□ 2.31
SHISA4-203ENST00000481699 KIF16BQ96L93 1317 aa29.46■■■□□ 2.31
SHISA4-203ENST00000481699 BCAR3O75815 825 aa29.46■■■□□ 2.31
SHISA4-203ENST00000481699 PHF14O94880 888 aa29.46■■■□□ 2.31
SHISA4-203ENST00000481699 AKT1S1Q96B36 256 aa29.46■■■□□ 2.31
SHISA4-203ENST00000481699 DDX58O95786 925 aaKnown RBP29.45■■■□□ 2.31
SHISA4-203ENST00000481699 EIF5P55010 431 aaKnown RBP29.45■■■□□ 2.31
SHISA4-203ENST00000481699 ZNF827Q17R98 1081 aa29.45■■■□□ 2.31
SHISA4-203ENST00000481699 KIF6Q6ZMV9 814 aa29.45■■■□□ 2.31
SHISA4-203ENST00000481699 XAGE3Q8WTP9 111 aa29.45■■■□□ 2.31
SHISA4-203ENST00000481699 COL15A1P39059 1388 aa29.44■■■□□ 2.3
SHISA4-203ENST00000481699 FLIIQ13045 1269 aa29.44■■■□□ 2.3
SHISA4-203ENST00000481699 TRAPPC3LQ5T215 181 aa29.44■■■□□ 2.3
SHISA4-203ENST00000481699 COPS6Q7L5N1 327 aa29.44■■■□□ 2.3
SHISA4-203ENST00000481699 FRAT1Q92837 279 aaPredicted RBP29.44■■■□□ 2.3
SHISA4-203ENST00000481699 PHAXQ9H814 394 aaKnown RBP29.44■■■□□ 2.3
SHISA4-203ENST00000481699 NUP188Q5SRE5 1749 aa29.43■■■□□ 2.3
SHISA4-203ENST00000481699 IPO8O15397 1037 aaKnown RBP29.43■■■□□ 2.3
SHISA4-203ENST00000481699 ADRA2BP18089 450 aa29.43■■■□□ 2.3
SHISA4-203ENST00000481699 SSFA2P28290 1259 aa29.43■■■□□ 2.3
SHISA4-203ENST00000481699 FKBP5Q13451 457 aaPredicted RBP29.43■■■□□ 2.3
SHISA4-203ENST00000481699 R3HDM1Q15032 1099 aaKnown RBP29.43■■■□□ 2.3
SHISA4-203ENST00000481699 SLC15A2Q16348 729 aa29.43■■■□□ 2.3
SHISA4-203ENST00000481699 FLAD1Q8NFF5 587 aa29.43■■■□□ 2.3
SHISA4-203ENST00000481699 BRPF1P55201 1214 aaPredicted RBP29.42■■■□□ 2.3
SHISA4-203ENST00000481699 G2E3Q7L622 706 aa29.42■■■□□ 2.3
SHISA4-203ENST00000481699 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.42■■■□□ 2.3
SHISA4-203ENST00000481699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.41■■■□□ 2.3
SHISA4-203ENST00000481699 MSH5O43196 834 aa29.41■■■□□ 2.3
SHISA4-203ENST00000481699 RFC4P35249 363 aa29.41■■■□□ 2.3
SHISA4-203ENST00000481699 DZIP3Q86Y13 1208 aaKnown RBP29.41■■■□□ 2.3
SHISA4-203ENST00000481699 ANO8Q9HCE9 1232 aaPredicted RBP29.41■■■□□ 2.3
SHISA4-203ENST00000481699 NOB1Q9ULX3 412 aaKnown RBP29.41■■■□□ 2.3
SHISA4-203ENST00000481699 PTPRCP08575 1304 aa29.41■■■□□ 2.3
SHISA4-203ENST00000481699 LRP10Q7Z4F1 713 aa29.4■■■□□ 2.3
SHISA4-203ENST00000481699 MYH14Q7Z406 1995 aaKnown RBP29.4■■■□□ 2.3
SHISA4-203ENST00000481699 TBC1D2BQ9UPU7 963 aa29.39■■■□□ 2.3
SHISA4-203ENST00000481699 ZPR1O75312 459 aa29.38■■■□□ 2.29
SHISA4-203ENST00000481699 TTLL7Q6ZT98 887 aa29.38■■■□□ 2.29
SHISA4-203ENST00000481699 RIC3Q7Z5B4 369 aa29.38■■■□□ 2.29
SHISA4-203ENST00000481699 ARHGEF1Q92888 912 aaKnown RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms