RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ATXN7L1Q9ULK2 861 aaPredicted RBP7.26□□□□□ -1.25
CBX3-207ENST00000481300 A6NJY4 79 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 CDK2AP1O14519 115 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 C2CD2LO14523 706 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 GTF2IP78347 998 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 NCOA4Q13772 614 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 DEPDC4Q8N2C3 294 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 NEDD1Q8NHV4 660 aa7.25□□□□□ -1.25
CBX3-207ENST00000481300 DNMT3AQ9Y6K1 912 aaPredicted RBP7.25□□□□□ -1.25
CBX3-207ENST00000481300 USP17L5A8MUK1 530 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 SHISA8B8ZZ34 492 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 FGFR3P22607 806 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 CTBSQ01459 385 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 HOMEZQ8IX15 550 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 C1orf216Q8TAB5 229 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 AIDAQ96BJ3 306 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 PPP1R12CQ9BZL4 782 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 ZCCHC2Q9C0B9 1178 aaKnown RBP7.24□□□□□ -1.25
CBX3-207ENST00000481300 HCN2Q9UL51 889 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 NOD1Q9Y239 953 aa7.24□□□□□ -1.25
CBX3-207ENST00000481300 LZTS3O60299 673 aaPredicted RBP7.23□□□□□ -1.25
CBX3-207ENST00000481300 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
CBX3-207ENST00000481300 UCN2Q96RP3 112 aa7.23□□□□□ -1.25
CBX3-207ENST00000481300 A0A1W2PNR3 127 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 PALM3A6NDB9 673 aaPredicted RBP7.22□□□□□ -1.25
CBX3-207ENST00000481300 BMP4P12644 408 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 NLRP8Q86W28 1048 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 BEND7Q8N7W2 519 aaPredicted RBP7.22□□□□□ -1.25
CBX3-207ENST00000481300 ZNF358Q9NW07 568 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 CABP1Q9NZU7 370 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 TFIP11Q9UBB9 837 aaKnown RBP7.22□□□□□ -1.25
CBX3-207ENST00000481300 PCDHGC4Q9Y5F7 938 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 PARP3Q9Y6F1 533 aa7.22□□□□□ -1.25
CBX3-207ENST00000481300 PHF20L1A8MW92 1017 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 RFX1P22670 979 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
CBX3-207ENST00000481300 EPHA4P54764 986 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 SNRPNP63162 240 aaKnown RBP7.21□□□□□ -1.26
CBX3-207ENST00000481300 PSME1Q06323 249 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 NBPF1Q3BBV0 1214 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 GPAT2Q6NUI2 795 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 FIGNL1Q6PIW4 674 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 GALNT6Q8NCL4 622 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 ZDHHC1Q8WTX9 485 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 ZDHHC3Q9NYG2 299 aa7.21□□□□□ -1.26
CBX3-207ENST00000481300 SCHIP1Q9P0W5 487 aaPredicted RBP7.21□□□□□ -1.26
CBX3-207ENST00000481300 GDF2Q9UK05 429 aaPredicted RBP7.21□□□□□ -1.26
CBX3-207ENST00000481300 BACH1O14867 736 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 ATP9BO43861 1147 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 FOXK2Q01167 660 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 ARSJQ5FYB0 599 aaPredicted RBP7.2□□□□□ -1.26
CBX3-207ENST00000481300 PODNQ7Z5L7 613 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 GOLGA6L1Q8N7Z2 621 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 DCAF5Q96JK2 942 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 ZIC5Q96T25 663 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 KIAA1024Q9UPX6 916 aa7.2□□□□□ -1.26
CBX3-207ENST00000481300 DCDC2BA2VCK2 349 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 USP17L3A6NCW0 530 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 USP17L4A6NCW7 530 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 ZBTB7BO15156 539 aaPredicted RBP7.19□□□□□ -1.26
CBX3-207ENST00000481300 ATXN7O15265 892 aaPredicted RBP7.19□□□□□ -1.26
CBX3-207ENST00000481300 ITGB2P05107 769 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 HOXB4P17483 251 aaPredicted RBP7.19□□□□□ -1.26
CBX3-207ENST00000481300 TATP17735 454 aaPredicted RBP7.19□□□□□ -1.26
CBX3-207ENST00000481300 TXLNAP40222 546 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 TNP2Q05952 138 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 CFAP70Q5T0N1 1121 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 USP17L2Q6R6M4 530 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 SLCO4C1Q6ZQN7 724 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 USP17L1Q7RTZ2 530 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 PLEKHM2Q8IWE5 1019 aa7.19□□□□□ -1.26
CBX3-207ENST00000481300 MAFBQ9Y5Q3 323 aaPredicted RBP7.19□□□□□ -1.26
CBX3-207ENST00000481300 PPP1R15AO75807 674 aaPredicted RBP7.18□□□□□ -1.26
CBX3-207ENST00000481300 MAPTP10636 758 aaKnown RBP7.18□□□□□ -1.26
CBX3-207ENST00000481300 CLDN10P78369 228 aa7.18□□□□□ -1.26
CBX3-207ENST00000481300 SUZ12Q15022 739 aaKnown RBP7.18□□□□□ -1.26
CBX3-207ENST00000481300 TBCELQ5QJ74 424 aa7.18□□□□□ -1.26
CBX3-207ENST00000481300 SLC9A9Q8IVB4 645 aa7.18□□□□□ -1.26
CBX3-207ENST00000481300 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
CBX3-207ENST00000481300 PBXIP1Q96AQ6 731 aa7.18□□□□□ -1.26
CBX3-207ENST00000481300 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
CBX3-207ENST00000481300 IGHA1P01876 353 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 ARAFP10398 606 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 CD33P20138 364 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 TEAD4Q15561 434 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 PLA2G4EQ3MJ16 856 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 TPCN2Q8NHX9 752 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 L3MBTL2Q969R5 705 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
CBX3-207ENST00000481300 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.16□□□□□ -1.26
CBX3-207ENST00000481300 NEURL1BA8MQ27 555 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 KHNYNO15037 678 aaKnown RBP7.16□□□□□ -1.26
CBX3-207ENST00000481300 FAM157BP0CG42 384 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 EPXP11678 715 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 NOS2P35228 1153 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 FAM182BQ5T319 152 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 SH3PXD2AQ5TCZ1 1133 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms