RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 FGD6Q6ZV73 1430 aa10□□□□□ -0.81
LRCH3-216ENST00000481048 UPP2O95045 317 aa10□□□□□ -0.81
LRCH3-216ENST00000481048 BMP2P12643 396 aa10□□□□□ -0.81
LRCH3-216ENST00000481048 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
LRCH3-216ENST00000481048 SH3RF1Q7Z6J0 888 aa10□□□□□ -0.81
LRCH3-216ENST00000481048 POLR3EQ9NVU0 708 aa10□□□□□ -0.81
LRCH3-216ENST00000481048 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
LRCH3-216ENST00000481048 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
LRCH3-216ENST00000481048 FSHRP23945 695 aa9.99□□□□□ -0.81
LRCH3-216ENST00000481048 VASH1Q7L8A9 365 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-216ENST00000481048 RSPH6AQ9H0K4 717 aa9.99□□□□□ -0.81
LRCH3-216ENST00000481048 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
LRCH3-216ENST00000481048 ARHGAP23Q9P227 1491 aa9.98□□□□□ -0.81
LRCH3-216ENST00000481048 SLIT1O75093 1534 aa9.98□□□□□ -0.81
LRCH3-216ENST00000481048 SH3BP5LQ7L8J4 393 aa9.98□□□□□ -0.81
LRCH3-216ENST00000481048 TXNDC2Q86VQ3 553 aa9.98□□□□□ -0.81
LRCH3-216ENST00000481048 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
LRCH3-216ENST00000481048 LMTK2Q8IWU2 1503 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 STRCP1A6NGW2 1772 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 MEIOBQ8N635 442 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 CARD14Q9BXL6 1004 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 MAP4K5Q9Y4K4 846 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 SYNMO15061 1565 aa9.97□□□□□ -0.81
LRCH3-216ENST00000481048 LTKP29376 864 aa9.96□□□□□ -0.82
LRCH3-216ENST00000481048 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
LRCH3-216ENST00000481048 TRMT44Q8IYL2 757 aaKnown RBP9.96□□□□□ -0.82
LRCH3-216ENST00000481048 HSPA1LP34931 641 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 CTDSPL2Q05D32 466 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 IDI1Q13907 227 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 SLC52A1Q9NWF4 448 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 TMEM2Q9UHN6 1383 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 ADGRL2O95490 1459 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
LRCH3-216ENST00000481048 PIK3C2BO00750 1634 aa9.94□□□□□ -0.82
LRCH3-216ENST00000481048 GPKOWQ92917 476 aaPredicted RBP eCLIP9.94□□□□□ -0.82
LRCH3-216ENST00000481048 EMILIN1Q9Y6C2 1016 aa9.94□□□□□ -0.82
LRCH3-216ENST00000481048 RPRD2Q5VT52 1461 aaKnown RBP9.93□□□□□ -0.82
LRCH3-216ENST00000481048 NOS1P29475 1434 aa9.93□□□□□ -0.82
LRCH3-216ENST00000481048 VSIG8P0DPA2 414 aa9.93□□□□□ -0.82
LRCH3-216ENST00000481048 CCDC116Q8IYX3 515 aa9.93□□□□□ -0.82
LRCH3-216ENST00000481048 ALKQ9UM73 1620 aa9.93□□□□□ -0.82
LRCH3-216ENST00000481048 EFCAB6Q5THR3 1501 aa9.92□□□□□ -0.82
LRCH3-216ENST00000481048 SOS2Q07890 1332 aaPredicted RBP9.92□□□□□ -0.82
LRCH3-216ENST00000481048 XIRP1Q702N8 1843 aaKnown RBP9.92□□□□□ -0.82
LRCH3-216ENST00000481048 PPFIA3O75145 1194 aa9.92□□□□□ -0.82
LRCH3-216ENST00000481048 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
LRCH3-216ENST00000481048 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
LRCH3-216ENST00000481048 ANKRD50Q9ULJ7 1429 aa9.91□□□□□ -0.82
LRCH3-216ENST00000481048 KCNA6P17658 529 aa9.91□□□□□ -0.82
LRCH3-216ENST00000481048 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
LRCH3-216ENST00000481048 DNMT3LQ9UJW3 386 aa9.91□□□□□ -0.82
LRCH3-216ENST00000481048 LRRN4Q8WUT4 740 aa9.9□□□□□ -0.82
LRCH3-216ENST00000481048 ARHGAP9Q9BRR9 750 aa9.9□□□□□ -0.82
LRCH3-216ENST00000481048 TET3O43151 1660 aa9.9□□□□□ -0.83
LRCH3-216ENST00000481048 MED1Q15648 1581 aaPredicted RBP9.89□□□□□ -0.83
LRCH3-216ENST00000481048 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
LRCH3-216ENST00000481048 FKBPLQ9UIM3 349 aa9.89□□□□□ -0.83
LRCH3-216ENST00000481048 GCC2Q8IWJ2 1684 aa9.89□□□□□ -0.83
LRCH3-216ENST00000481048 MYO5BQ9ULV0 1848 aa9.89□□□□□ -0.83
LRCH3-216ENST00000481048 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
LRCH3-216ENST00000481048 PPP1R26Q5T8A7 1209 aaPredicted RBP9.88□□□□□ -0.83
LRCH3-216ENST00000481048 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
LRCH3-216ENST00000481048 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
LRCH3-216ENST00000481048 CHD2O14647 1828 aaKnown RBP9.87□□□□□ -0.83
LRCH3-216ENST00000481048 TTLL8A6PVC2 850 aa9.87□□□□□ -0.83
LRCH3-216ENST00000481048 CBLBQ13191 982 aa9.87□□□□□ -0.83
LRCH3-216ENST00000481048 SKIV2LQ15477 1246 aaKnown RBP9.87□□□□□ -0.83
LRCH3-216ENST00000481048 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.87□□□□□ -0.83
LRCH3-216ENST00000481048 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
LRCH3-216ENST00000481048 NR6A1Q15406 480 aa9.86□□□□□ -0.83
LRCH3-216ENST00000481048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.86□□□□□ -0.83
LRCH3-216ENST00000481048 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
LRCH3-216ENST00000481048 PROSER2Q86WR7 435 aaPredicted RBP9.86□□□□□ -0.83
LRCH3-216ENST00000481048 SLC10A4Q96EP9 437 aa9.86□□□□□ -0.83
LRCH3-216ENST00000481048 SLC26A8Q96RN1 970 aa9.86□□□□□ -0.83
LRCH3-216ENST00000481048 KCTD15Q96SI1 283 aaPredicted RBP9.86□□□□□ -0.83
LRCH3-216ENST00000481048 UNC13BO14795 1591 aa9.85□□□□□ -0.83
LRCH3-216ENST00000481048 FIGNL2A6NMB9 653 aa9.85□□□□□ -0.83
LRCH3-216ENST00000481048 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
LRCH3-216ENST00000481048 TBX22Q9Y458 520 aa9.85□□□□□ -0.83
LRCH3-216ENST00000481048 TMEM94Q12767 1356 aa9.85□□□□□ -0.83
LRCH3-216ENST00000481048 PLEKHG1Q9ULL1 1385 aa9.85□□□□□ -0.83
LRCH3-216ENST00000481048 NKTRP30414 1462 aaKnown RBP9.85□□□□□ -0.83
LRCH3-216ENST00000481048 ZFYVE9O95405 1425 aa9.84□□□□□ -0.83
LRCH3-216ENST00000481048 NCOA3Q9Y6Q9 1424 aa9.84□□□□□ -0.83
LRCH3-216ENST00000481048 Q6ZVU0 165 aa9.84□□□□□ -0.83
LRCH3-216ENST00000481048 BCANQ96GW7 911 aa9.84□□□□□ -0.83
LRCH3-216ENST00000481048 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
LRCH3-216ENST00000481048 TMEM131LA2VDJ0 1609 aa9.84□□□□□ -0.83
LRCH3-216ENST00000481048 NWD1Q149M9 1564 aa9.84□□□□□ -0.83
LRCH3-216ENST00000481048 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
LRCH3-216ENST00000481048 PTSQ03393 145 aa9.83□□□□□ -0.84
LRCH3-216ENST00000481048 SH3D19Q5HYK7 790 aa9.83□□□□□ -0.84
LRCH3-216ENST00000481048 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
LRCH3-216ENST00000481048 E9PCH4 1651 aa9.83□□□□□ -0.84
LRCH3-216ENST00000481048 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
LRCH3-216ENST00000481048 IQGAP3Q86VI3 1631 aa9.82□□□□□ -0.84
LRCH3-216ENST00000481048 SPINT1O43278 529 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms