RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 C1QTNF2Q9BXJ5 285 aa8.08□□□□□ -1.12
COPA-203ENST00000481040 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
COPA-203ENST00000481040 MPSTP25325 297 aa8.07□□□□□ -1.12
COPA-203ENST00000481040 FMR1Q06787 632 aaKnown RBP eCLIP8.07□□□□□ -1.121e-10■■■■□ 22.2
COPA-203ENST00000481040 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
COPA-203ENST00000481040 KIFC2Q96AC6 838 aa8.07□□□□□ -1.12
COPA-203ENST00000481040 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
COPA-203ENST00000481040 BRPF3Q9ULD4 1205 aa8.07□□□□□ -1.12
COPA-203ENST00000481040 SMARCA5O60264 1052 aaPredicted RBP8.06□□□□□ -1.12
COPA-203ENST00000481040 ADH1CP00326 375 aa8.06□□□□□ -1.12
COPA-203ENST00000481040 LDLRAD1Q5T700 205 aa8.06□□□□□ -1.12
COPA-203ENST00000481040 SCG3Q8WXD2 468 aaKnown RBP8.06□□□□□ -1.12
COPA-203ENST00000481040 SPATA32Q96LK8 384 aa8.06□□□□□ -1.12
COPA-203ENST00000481040 ZFP42Q96MM3 310 aa8.06□□□□□ -1.12
COPA-203ENST00000481040 TMEM229AB2RXF0 380 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 WIPF1O43516 503 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 GRM5P41594 1212 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 WDR4P57081 412 aaKnown RBP8.05□□□□□ -1.12
COPA-203ENST00000481040 RAB15P59190 212 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 FGD1P98174 961 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
COPA-203ENST00000481040 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
COPA-203ENST00000481040 TMC1Q8TDI8 760 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 PIK3R5Q8WYR1 880 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 VTI1AQ96AJ9 217 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 CITED4Q96RK1 184 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
COPA-203ENST00000481040 SOBPA7XYQ1 873 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 LDHBP07195 334 aaKnown RBP8.04□□□□□ -1.12
COPA-203ENST00000481040 SCTRP47872 440 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 VEGFBP49765 207 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 PLCB3Q01970 1234 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 DSC3Q14574 896 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 ARID5BQ14865 1188 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 TNS4Q8IZW8 715 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
COPA-203ENST00000481040 BACH1O14867 736 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 PRPF40AO75400 957 aaKnown RBP8.03□□□□□ -1.12
COPA-203ENST00000481040 RAD51AP2Q09MP3 1159 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 ITPKCQ96DU7 683 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 DMRTB1Q96MA1 342 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
COPA-203ENST00000481040 SAP130Q9H0E3 1048 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 PARP2Q9UGN5 583 aa8.03□□□□□ -1.12
COPA-203ENST00000481040 ITGAEP38570 1179 aa8.02□□□□□ -1.13
COPA-203ENST00000481040 MAPK8P45983 427 aa8.02□□□□□ -1.13
COPA-203ENST00000481040 EHHADHQ08426 723 aa8.02□□□□□ -1.13
COPA-203ENST00000481040 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
COPA-203ENST00000481040 MRPL14Q6P1L8 145 aaKnown RBP8.02□□□□□ -1.13
COPA-203ENST00000481040 DUSP9Q99956 384 aaKnown RBP8.02□□□□□ -1.13
COPA-203ENST00000481040 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
COPA-203ENST00000481040 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
COPA-203ENST00000481040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.02□□□□□ -1.13
COPA-203ENST00000481040 CCDC87Q9NVE4 849 aa8.02□□□□□ -1.13
COPA-203ENST00000481040 FZD6O60353 706 aa8.01□□□□□ -1.13
COPA-203ENST00000481040 EIF1AXP47813 144 aaKnown RBP8.01□□□□□ -1.13
COPA-203ENST00000481040 SCNN1DP51172 638 aa8.01□□□□□ -1.13
COPA-203ENST00000481040 GDF10P55107 478 aa8.01□□□□□ -1.13
COPA-203ENST00000481040 AAMPQ13685 434 aa8.01□□□□□ -1.13
COPA-203ENST00000481040 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
COPA-203ENST00000481040 METTL16Q86W50 562 aaKnown RBP8.01□□□□□ -1.13
COPA-203ENST00000481040 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
COPA-203ENST00000481040 CHMP7Q8WUX9 453 aaPredicted RBP8.01□□□□□ -1.13
COPA-203ENST00000481040 TSPAN10Q9H1Z9 355 aaPredicted RBP8.01□□□□□ -1.13
COPA-203ENST00000481040 CADPSQ9ULU8 1353 aa8□□□□□ -1.13
COPA-203ENST00000481040 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
COPA-203ENST00000481040 WASLO00401 505 aaPredicted RBP8□□□□□ -1.13
COPA-203ENST00000481040 SORBS3O60504 671 aa8□□□□□ -1.13
COPA-203ENST00000481040 ZIC2O95409 532 aaPredicted RBP8□□□□□ -1.13
COPA-203ENST00000481040 EPHA4P54764 986 aa8□□□□□ -1.13
COPA-203ENST00000481040 DAB2P98082 770 aa8□□□□□ -1.13
COPA-203ENST00000481040 NXF1Q9UBU9 619 aaKnown RBP8□□□□□ -1.13
COPA-203ENST00000481040 ERBB4Q15303 1308 aa8□□□□□ -1.13
COPA-203ENST00000481040 STAU1O95793 577 aaKnown RBP7.99□□□□□ -1.13
COPA-203ENST00000481040 IGHA2P01877 340 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
COPA-203ENST00000481040 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 INTS6LQ5JSJ4 861 aaKnown RBP7.99□□□□□ -1.13
COPA-203ENST00000481040 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 RNF34Q969K3 372 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 FAM129BQ96TA1 746 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 TANGO6Q9C0B7 1094 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 METTL5Q9NRN9 209 aaKnown RBP7.99□□□□□ -1.13
COPA-203ENST00000481040 RNF19AQ9NV58 838 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 STIM2Q9P246 746 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
COPA-203ENST00000481040 A0A1W2PRU2 124 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 TNFRSF10BO14763 440 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 PPP1R12BO60237 982 aaPredicted RBP7.98□□□□□ -1.13
COPA-203ENST00000481040 INHAP05111 366 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 FSHRP23945 695 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 FANCCQ00597 558 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 ATP2B2Q01814 1243 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 PSMD2Q13200 908 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 NR5A1Q13285 461 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 COX20Q5RI15 118 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms