RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 ADCY9O60503 1353 aa10.77□□□□□ -0.69
CTPS1-209ENST00000480420 BTBD11A6QL63 1104 aa10.76□□□□□ -0.69
CTPS1-209ENST00000480420 NPHP1O15259 732 aa10.76□□□□□ -0.69
CTPS1-209ENST00000480420 STARD3NLO95772 234 aa10.76□□□□□ -0.69
CTPS1-209ENST00000480420 CYP19A1P11511 503 aaPredicted RBP10.76□□□□□ -0.69
CTPS1-209ENST00000480420 HSPA6P17066 643 aa10.76□□□□□ -0.69
CTPS1-209ENST00000480420 IL17REQ8NFR9 667 aa10.76□□□□□ -0.69
CTPS1-209ENST00000480420 ZBTB1Q9Y2K1 713 aa10.76□□□□□ -0.69
CTPS1-209ENST00000480420 USP42Q9H9J4 1324 aaKnown RBP10.76□□□□□ -0.69
CTPS1-209ENST00000480420 MCM10Q7L590 875 aa10.75□□□□□ -0.69
CTPS1-209ENST00000480420 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
CTPS1-209ENST00000480420 RSPH6AQ9H0K4 717 aa10.75□□□□□ -0.69
CTPS1-209ENST00000480420 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
CTPS1-209ENST00000480420 KCPQ6ZWJ8 1503 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 KCNQ3O43525 872 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 CHRNA5P30532 468 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 PIP4K2AP48426 406 aaPredicted RBP10.74□□□□□ -0.69
CTPS1-209ENST00000480420 TGFB2P61812 414 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 DDR1Q08345 913 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 DCTN1Q14203 1278 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 FMNL2Q96PY5 1086 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
CTPS1-209ENST00000480420 COL15A1P39059 1388 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 MRC1P22897 1456 aa10.74□□□□□ -0.69
CTPS1-209ENST00000480420 KIF13BQ9NQT8 1826 aa10.73□□□□□ -0.69
CTPS1-209ENST00000480420 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
CTPS1-209ENST00000480420 PXDNLA1KZ92 1463 aa10.73□□□□□ -0.69
CTPS1-209ENST00000480420 SIPA1L3O60292 1781 aaPredicted RBP10.72□□□□□ -0.69
CTPS1-209ENST00000480420 UBR2Q8IWV8 1755 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
CTPS1-209ENST00000480420 A1BGP04217 495 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
CTPS1-209ENST00000480420 NFIXQ14938 502 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 DALRD3Q5D0E6 543 aaKnown RBP10.72□□□□□ -0.69
CTPS1-209ENST00000480420 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 CCDC24Q8N4L8 307 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 MIS18AQ9NYP9 233 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 PIM2Q9P1W9 311 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 NARFQ9UHQ1 456 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 C10orf71Q711Q0 1435 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
CTPS1-209ENST00000480420 A0A087WZG4 1122 aa10.71□□□□□ -0.69
CTPS1-209ENST00000480420 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.69
CTPS1-209ENST00000480420 SERPINB2P05120 415 aa10.71□□□□□ -0.69
CTPS1-209ENST00000480420 TEX13AQ9BXU3 409 aaPredicted RBP10.71□□□□□ -0.69
CTPS1-209ENST00000480420 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
CTPS1-209ENST00000480420 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.69
CTPS1-209ENST00000480420 HEG1Q9ULI3 1381 aa10.71□□□□□ -0.69
CTPS1-209ENST00000480420 MAPK8IP3Q9UPT6 1336 aa10.71□□□□□ -0.69
CTPS1-209ENST00000480420 KIAA1551Q9HCM1 1747 aa10.7□□□□□ -0.7
CTPS1-209ENST00000480420 PRAMEF22A3QJZ6 481 aa10.7□□□□□ -0.7
CTPS1-209ENST00000480420 TM4SF1P30408 202 aa10.7□□□□□ -0.7
CTPS1-209ENST00000480420 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
CTPS1-209ENST00000480420 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
CTPS1-209ENST00000480420 C2CD5Q86YS7 1000 aa10.69□□□□□ -0.7
CTPS1-209ENST00000480420 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTPS1-209ENST00000480420 USP16Q9Y5T5 823 aa10.69□□□□□ -0.7
CTPS1-209ENST00000480420 BRCA1P38398 1863 aaKnown RBP10.69□□□□□ -0.7
CTPS1-209ENST00000480420 CACNA1SQ13698 1873 aa10.68□□□□□ -0.7
CTPS1-209ENST00000480420 EIF5P55010 431 aaKnown RBP10.68□□□□□ -0.7
CTPS1-209ENST00000480420 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
CTPS1-209ENST00000480420 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
CTPS1-209ENST00000480420 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
CTPS1-209ENST00000480420 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
CTPS1-209ENST00000480420 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
CTPS1-209ENST00000480420 CCDC88AQ3V6T2 1871 aa10.68□□□□□ -0.7
CTPS1-209ENST00000480420 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
CTPS1-209ENST00000480420 H0YIN7 160 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 KIF3CO14782 793 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 SNRPA1P09661 255 aaKnown RBP10.67□□□□□ -0.7
CTPS1-209ENST00000480420 KCNA3P22001 575 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
CTPS1-209ENST00000480420 NEUROD2Q15784 382 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 SETDB2Q96T68 719 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 RNF181Q9P0P0 153 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
CTPS1-209ENST00000480420 CEMIPQ8WUJ3 1361 aa10.66□□□□□ -0.7
CTPS1-209ENST00000480420 IL6STP40189 918 aaPredicted RBP10.66□□□□□ -0.7
CTPS1-209ENST00000480420 PNNQ9H307 717 aaKnown RBP10.66□□□□□ -0.7
CTPS1-209ENST00000480420 NFE2L2Q16236 605 aa10.65□□□□□ -0.7
CTPS1-209ENST00000480420 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
CTPS1-209ENST00000480420 C16orf71Q8IYS4 520 aaPredicted RBP10.65□□□□□ -0.7
CTPS1-209ENST00000480420 TTLL6Q8N841 843 aa10.65□□□□□ -0.7
CTPS1-209ENST00000480420 CNBD1Q8NA66 436 aa10.65□□□□□ -0.7
CTPS1-209ENST00000480420 RRP7AQ9Y3A4 280 aaKnown RBP10.65□□□□□ -0.7
CTPS1-209ENST00000480420 CARMIL3Q8ND23 1372 aa10.65□□□□□ -0.71
CTPS1-209ENST00000480420 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 HTATSF1O43719 755 aaKnown RBP10.64□□□□□ -0.71
CTPS1-209ENST00000480420 MYL6BP14649 208 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 GTF2E1P29083 439 aaPredicted RBP10.64□□□□□ -0.71
CTPS1-209ENST00000480420 PDE6BP35913 854 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 APLP1P51693 650 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 ST5P78524 1137 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 RASSF7Q02833 373 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 RALBP1Q15311 655 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 NBPF5PQ86XG9 351 aaPredicted RBP10.64□□□□□ -0.71
CTPS1-209ENST00000480420 ZNF652Q9Y2D9 606 aa10.64□□□□□ -0.71
CTPS1-209ENST00000480420 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms