RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 BCL2L13Q9BXK5 485 aa21.57■■□□□ 1.04
SCAMP3-207ENST00000480219 DDX21Q9NR30 783 aaKnown RBP eCLIP21.57■■□□□ 1.04
SCAMP3-207ENST00000480219 RGPD3A6NKT7 1758 aaPredicted RBP21.56■■□□□ 1.04
SCAMP3-207ENST00000480219 RGPD4Q7Z3J3 1758 aa21.56■■□□□ 1.04
SCAMP3-207ENST00000480219 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
SCAMP3-207ENST00000480219 PTPRCP08575 1304 aa21.55■■□□□ 1.04
SCAMP3-207ENST00000480219 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
SCAMP3-207ENST00000480219 EIF2S2P20042 333 aaKnown RBP21.55■■□□□ 1.04
SCAMP3-207ENST00000480219 DNAJC10Q8IXB1 793 aa21.55■■□□□ 1.04
SCAMP3-207ENST00000480219 CHPF2Q9P2E5 772 aa21.55■■□□□ 1.04
SCAMP3-207ENST00000480219 IPO8O15397 1037 aaKnown RBP21.54■■□□□ 1.04
SCAMP3-207ENST00000480219 TRIM37O94972 964 aa21.54■■□□□ 1.04
SCAMP3-207ENST00000480219 STARD3NLO95772 234 aa21.54■■□□□ 1.04
SCAMP3-207ENST00000480219 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
SCAMP3-207ENST00000480219 PDE3AQ14432 1141 aa21.54■■□□□ 1.04
SCAMP3-207ENST00000480219 HYPKQ9NX55 129 aa21.54■■□□□ 1.04
SCAMP3-207ENST00000480219 PLSCR1O15162 318 aa21.53■■□□□ 1.04
SCAMP3-207ENST00000480219 ZKSCAN2Q63HK3 967 aa21.53■■□□□ 1.04
SCAMP3-207ENST00000480219 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
SCAMP3-207ENST00000480219 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
SCAMP3-207ENST00000480219 ITPK1Q13572 414 aa21.52■■□□□ 1.04
SCAMP3-207ENST00000480219 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
SCAMP3-207ENST00000480219 NBPF26B4DH59 902 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 FLIIQ13045 1269 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 NBPF14Q5TI25 921 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 NBPF10Q6P3W6 841 aaKnown RBP21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 G2E3Q7L622 706 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 NBPF15Q8N660 670 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
SCAMP3-207ENST00000480219 PLIN1O60240 522 aa21.5■■□□□ 1.03
SCAMP3-207ENST00000480219 MS4A1P11836 297 aa21.5■■□□□ 1.03
SCAMP3-207ENST00000480219 TRIM27P14373 513 aa21.5■■□□□ 1.03
SCAMP3-207ENST00000480219 PROSER3Q2NL68 480 aa21.5■■□□□ 1.03
SCAMP3-207ENST00000480219 API5Q9BZZ5 524 aaKnown RBP21.5■■□□□ 1.03
SCAMP3-207ENST00000480219 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
SCAMP3-207ENST00000480219 SLC27A3Q5K4L6 730 aa21.49■■□□□ 1.03
SCAMP3-207ENST00000480219 ABCC4O15439 1325 aa21.49■■□□□ 1.03
SCAMP3-207ENST00000480219 CNTNAP4Q9C0A0 1308 aa21.49■■□□□ 1.03
SCAMP3-207ENST00000480219 PXDNLA1KZ92 1463 aa21.48■■□□□ 1.03
SCAMP3-207ENST00000480219 A1BGP04217 495 aa21.48■■□□□ 1.03
SCAMP3-207ENST00000480219 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
SCAMP3-207ENST00000480219 RC3H1Q5TC82 1133 aaKnown RBP21.48■■□□□ 1.03
SCAMP3-207ENST00000480219 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
SCAMP3-207ENST00000480219 N4BP2Q86UW6 1770 aaPredicted RBP21.47■■□□□ 1.03
SCAMP3-207ENST00000480219 INTS5Q6P9B9 1019 aaKnown RBP21.47■■□□□ 1.03
SCAMP3-207ENST00000480219 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
SCAMP3-207ENST00000480219 ANXA1P04083 346 aa21.46■■□□□ 1.03
SCAMP3-207ENST00000480219 LINC00116Q8NCU8 138 aa21.46■■□□□ 1.03
SCAMP3-207ENST00000480219 CCDC87Q9NVE4 849 aa21.46■■□□□ 1.03
SCAMP3-207ENST00000480219 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
SCAMP3-207ENST00000480219 MYH14Q7Z406 1995 aaKnown RBP21.46■■□□□ 1.03
SCAMP3-207ENST00000480219 CANXP27824 592 aaKnown RBP21.45■■□□□ 1.02
SCAMP3-207ENST00000480219 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
SCAMP3-207ENST00000480219 C20orf194Q5TEA3 1177 aa21.45■■□□□ 1.02
SCAMP3-207ENST00000480219 DZIP1LQ8IYY4 767 aaKnown RBP21.45■■□□□ 1.02
SCAMP3-207ENST00000480219 IBTKQ9P2D0 1353 aaPredicted RBP21.45■■□□□ 1.02
SCAMP3-207ENST00000480219 RLBP1P12271 317 aa21.44■■□□□ 1.02
SCAMP3-207ENST00000480219 CRKLP46109 303 aaKnown RBP21.44■■□□□ 1.02
SCAMP3-207ENST00000480219 PROM2Q8N271 834 aa21.44■■□□□ 1.02
SCAMP3-207ENST00000480219 LRRC4BQ9NT99 713 aa21.44■■□□□ 1.02
SCAMP3-207ENST00000480219 TNNQ9UQP3 1299 aa21.44■■□□□ 1.02
SCAMP3-207ENST00000480219 ZBTB1Q9Y2K1 713 aa21.44■■□□□ 1.02
SCAMP3-207ENST00000480219 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
SCAMP3-207ENST00000480219 APBA3O96018 575 aa21.43■■□□□ 1.02
SCAMP3-207ENST00000480219 EIF5P55010 431 aaKnown RBP21.43■■□□□ 1.02
SCAMP3-207ENST00000480219 ERICH6BQ5W0A0 696 aa21.43■■□□□ 1.02
SCAMP3-207ENST00000480219 ADCY9O60503 1353 aa21.43■■□□□ 1.02
SCAMP3-207ENST00000480219 NEFLP07196 543 aa21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 MYL6BP14649 208 aa21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 FKBP5Q13451 457 aaPredicted RBP21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 TXNRD1Q16881 649 aa21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 INTS3Q68E01 1043 aaKnown RBP21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 COPS6Q7L5N1 327 aa21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 XAGE3Q8WTP9 111 aa21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 ATP10DQ9P241 1426 aa21.42■■□□□ 1.02
SCAMP3-207ENST00000480219 DDX58O95786 925 aaKnown RBP21.41■■□□□ 1.02
SCAMP3-207ENST00000480219 KSR2Q6VAB6 950 aa21.41■■□□□ 1.02
SCAMP3-207ENST00000480219 NUP188Q5SRE5 1749 aa21.41■■□□□ 1.02
SCAMP3-207ENST00000480219 PIP4K2AP48426 406 aaPredicted RBP21.4■■□□□ 1.02
SCAMP3-207ENST00000480219 CCDC125Q86Z20 511 aa21.4■■□□□ 1.02
SCAMP3-207ENST00000480219 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
SCAMP3-207ENST00000480219 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
SCAMP3-207ENST00000480219 PI4KAP2A4QPH2 592 aa21.39■■□□□ 1.01
SCAMP3-207ENST00000480219 RGL2O15211 777 aa21.39■■□□□ 1.01
SCAMP3-207ENST00000480219 PI4KAP1Q8N8J0 262 aa21.39■■□□□ 1.01
SCAMP3-207ENST00000480219 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 RPS6KA4O75676 772 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 MVPQ14764 893 aaKnown RBP21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 ANKRD13DQ6ZTN6 518 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 TMEM57Q8N5G2 664 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 PLBD2Q8NHP8 589 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 DNAAF4Q8WXU2 420 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 CAMKK2Q96RR4 588 aa21.38■■□□□ 1.01
SCAMP3-207ENST00000480219 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
SCAMP3-207ENST00000480219 KCNQ4P56696 695 aa21.37■■□□□ 1.01
SCAMP3-207ENST00000480219 AAMPQ13685 434 aa21.37■■□□□ 1.01
SCAMP3-207ENST00000480219 TTLL7Q6ZT98 887 aa21.37■■□□□ 1.01
SCAMP3-207ENST00000480219 CRBNQ96SW2 442 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms