RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 CCDC30Q5VVM6 783 aa14.41□□□□□ -0.1
CLDN11-205ENST00000480067 UBR2Q8IWV8 1755 aa14.4□□□□□ -0.1
CLDN11-205ENST00000480067 A1BGP04217 495 aa14.4□□□□□ -0.1
CLDN11-205ENST00000480067 CT47B1P0C2W7 299 aaPredicted RBP14.4□□□□□ -0.1
CLDN11-205ENST00000480067 RC3H1Q5TC82 1133 aaKnown RBP14.4□□□□□ -0.1
CLDN11-205ENST00000480067 AK7Q96M32 723 aa14.4□□□□□ -0.1
CLDN11-205ENST00000480067 NBPF14Q5TI25 921 aa14.39□□□□□ -0.11
CLDN11-205ENST00000480067 INTS5Q6P9B9 1019 aaKnown RBP14.39□□□□□ -0.11
CLDN11-205ENST00000480067 NPM2Q86SE8 214 aaKnown RBP14.39□□□□□ -0.11
CLDN11-205ENST00000480067 CCDC87Q9NVE4 849 aa14.39□□□□□ -0.11
CLDN11-205ENST00000480067 LY75O60449 1722 aa14.39□□□□□ -0.11
CLDN11-205ENST00000480067 SOCS7O14512 581 aa14.39□□□□□ -0.11
CLDN11-205ENST00000480067 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
CLDN11-205ENST00000480067 ZNF428Q96B54 188 aa14.39□□□□□ -0.11
CLDN11-205ENST00000480067 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
CLDN11-205ENST00000480067 DBF4Q9UBU7 674 aaPredicted RBP14.39□□□□□ -0.11
CLDN11-205ENST00000480067 CNTNAP4Q9C0A0 1308 aa14.38□□□□□ -0.11
CLDN11-205ENST00000480067 GNPATO15228 680 aa14.38□□□□□ -0.11
CLDN11-205ENST00000480067 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
CLDN11-205ENST00000480067 ERBB4Q15303 1308 aa14.37□□□□□ -0.11
CLDN11-205ENST00000480067 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
CLDN11-205ENST00000480067 MYL6BP14649 208 aa14.37□□□□□ -0.11
CLDN11-205ENST00000480067 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
CLDN11-205ENST00000480067 DDX21Q9NR30 783 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLDN11-205ENST00000480067 STK32BQ9NY57 414 aa14.37□□□□□ -0.11
CLDN11-205ENST00000480067 CHPF2Q9P2E5 772 aa14.37□□□□□ -0.11
CLDN11-205ENST00000480067 ZBTB1Q9Y2K1 713 aa14.37□□□□□ -0.11
CLDN11-205ENST00000480067 RTCBQ9Y3I0 505 aaKnown RBP14.37□□□□□ -0.11
CLDN11-205ENST00000480067 ZNF330Q9Y3S2 320 aaPredicted RBP14.37□□□□□ -0.11
CLDN11-205ENST00000480067 ZNF831Q5JPB2 1677 aa14.36□□□□□ -0.11
CLDN11-205ENST00000480067 RGPD3A6NKT7 1758 aaPredicted RBP14.36□□□□□ -0.11
CLDN11-205ENST00000480067 RGPD4Q7Z3J3 1758 aa14.36□□□□□ -0.11
CLDN11-205ENST00000480067 NBPF26B4DH59 902 aa14.36□□□□□ -0.11
CLDN11-205ENST00000480067 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
CLDN11-205ENST00000480067 NBPF10Q6P3W6 841 aaKnown RBP14.36□□□□□ -0.11
CLDN11-205ENST00000480067 NBPF15Q8N660 670 aa14.36□□□□□ -0.11
CLDN11-205ENST00000480067 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
CLDN11-205ENST00000480067 RPS6KA4O75676 772 aa14.35□□□□□ -0.11
CLDN11-205ENST00000480067 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
CLDN11-205ENST00000480067 PDIA6Q15084 440 aa14.35□□□□□ -0.11
CLDN11-205ENST00000480067 SLC15A2Q16348 729 aa14.35□□□□□ -0.11
CLDN11-205ENST00000480067 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
CLDN11-205ENST00000480067 ARXQ96QS3 562 aa14.35□□□□□ -0.11
CLDN11-205ENST00000480067 HYPKQ9NX55 129 aa14.35□□□□□ -0.11
CLDN11-205ENST00000480067 PHF14O94880 888 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 ANXA1P04083 346 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 ALDH1L2Q3SY69 923 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 TRAPPC3LQ5T215 181 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
CLDN11-205ENST00000480067 EIF5P55010 431 aaKnown RBP14.34□□□□□ -0.11
CLDN11-205ENST00000480067 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
CLDN11-205ENST00000480067 SMC4Q9NTJ3 1288 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 TJP1Q07157 1748 aa14.34□□□□□ -0.11
CLDN11-205ENST00000480067 A0A087WZG4 1122 aa14.33□□□□□ -0.12
CLDN11-205ENST00000480067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
CLDN11-205ENST00000480067 SSFA2P28290 1259 aa14.33□□□□□ -0.12
CLDN11-205ENST00000480067 FLAD1Q8NFF5 587 aa14.33□□□□□ -0.12
CLDN11-205ENST00000480067 BCL2L13Q9BXK5 485 aa14.33□□□□□ -0.12
CLDN11-205ENST00000480067 C5P01031 1676 aa14.32□□□□□ -0.12
CLDN11-205ENST00000480067 RFC4P35249 363 aa14.32□□□□□ -0.12
CLDN11-205ENST00000480067 AIMP1Q12904 312 aaKnown RBP14.32□□□□□ -0.12
CLDN11-205ENST00000480067 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
CLDN11-205ENST00000480067 COPS6Q7L5N1 327 aa14.32□□□□□ -0.12
CLDN11-205ENST00000480067 RCAN3Q9UKA8 241 aa14.32□□□□□ -0.12
CLDN11-205ENST00000480067 C4BP0C0L5 1744 aa14.32□□□□□ -0.12
CLDN11-205ENST00000480067 CICQ96RK0 1608 aaPredicted RBP14.32□□□□□ -0.12
CLDN11-205ENST00000480067 AMIGO3Q86WK7 504 aa14.31□□□□□ -0.12
CLDN11-205ENST00000480067 XAGE3Q8WTP9 111 aa14.31□□□□□ -0.12
CLDN11-205ENST00000480067 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
CLDN11-205ENST00000480067 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
CLDN11-205ENST00000480067 ZPR1O75312 459 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 KIF6Q6ZMV9 814 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
CLDN11-205ENST00000480067 MRPL50Q8N5N7 158 aaKnown RBP14.3□□□□□ -0.12
CLDN11-205ENST00000480067 TBC1D2BQ9UPU7 963 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-205ENST00000480067 COL15A1P39059 1388 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 BCAR3O75815 825 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 FLIIQ13045 1269 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 RREB1Q92766 1687 aa14.3□□□□□ -0.12
CLDN11-205ENST00000480067 LAMB4A4D0S4 1761 aa14.29□□□□□ -0.12
CLDN11-205ENST00000480067 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
CLDN11-205ENST00000480067 DDX58O95786 925 aaKnown RBP14.29□□□□□ -0.12
CLDN11-205ENST00000480067 R3HDM1Q15032 1099 aaKnown RBP14.29□□□□□ -0.12
CLDN11-205ENST00000480067 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
CLDN11-205ENST00000480067 ANKRD13DQ6ZTN6 518 aa14.29□□□□□ -0.12
CLDN11-205ENST00000480067 G2E3Q7L622 706 aa14.29□□□□□ -0.12
CLDN11-205ENST00000480067 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-205ENST00000480067 MYH14Q7Z406 1995 aaKnown RBP14.28□□□□□ -0.12
CLDN11-205ENST00000480067 BRPF1P55201 1214 aaPredicted RBP14.28□□□□□ -0.12
CLDN11-205ENST00000480067 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
CLDN11-205ENST00000480067 NARFQ9UHQ1 456 aa14.28□□□□□ -0.12
CLDN11-205ENST00000480067 PNPLA7Q6ZV29 1317 aa14.28□□□□□ -0.12
CLDN11-205ENST00000480067 IPO8O15397 1037 aaKnown RBP14.27□□□□□ -0.12
CLDN11-205ENST00000480067 RIC3Q7Z5B4 369 aa14.27□□□□□ -0.12
CLDN11-205ENST00000480067 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.12
CLDN11-205ENST00000480067 NOB1Q9ULX3 412 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms