RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 ITPK1Q13572 414 aa15.08■□□□□ 0
TRAPPC12-219ENST00000479955 RC3H1Q5TC82 1133 aaKnown RBP15.08■□□□□ 0
TRAPPC12-219ENST00000479955 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0
TRAPPC12-219ENST00000479955 LAMB4A4D0S4 1761 aa15.08■□□□□ 0
TRAPPC12-219ENST00000479955 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
TRAPPC12-219ENST00000479955 PROM2Q8N271 834 aa15.07■□□□□ 0
TRAPPC12-219ENST00000479955 DDX21Q9NR30 783 aaKnown RBP eCLIP15.07■□□□□ 0
TRAPPC12-219ENST00000479955 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
TRAPPC12-219ENST00000479955 TJP1Q07157 1748 aa15.06■□□□□ 0
TRAPPC12-219ENST00000479955 EZH2Q15910 746 aaKnown RBP15.06■□□□□ 0
TRAPPC12-219ENST00000479955 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
TRAPPC12-219ENST00000479955 HYPKQ9NX55 129 aa15.06■□□□□ 0
TRAPPC12-219ENST00000479955 RCAN3Q9UKA8 241 aa15.06■□□□□ 0
TRAPPC12-219ENST00000479955 C5P01031 1676 aa15.06■□□□□ 0
TRAPPC12-219ENST00000479955 CACNA1FO60840 1977 aa15.05■□□□□ 0
TRAPPC12-219ENST00000479955 SLC4A2P04920 1241 aa15.05■□□□□ -0
TRAPPC12-219ENST00000479955 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
TRAPPC12-219ENST00000479955 CRKLP46109 303 aaKnown RBP15.05■□□□□ -0
TRAPPC12-219ENST00000479955 DEFB132Q7Z7B7 95 aa15.05■□□□□ -0
TRAPPC12-219ENST00000479955 LINC00116Q8NCU8 138 aa15.05■□□□□ -0
TRAPPC12-219ENST00000479955 NECTIN2Q92692 538 aa15.05■□□□□ -0
TRAPPC12-219ENST00000479955 LRRC4BQ9NT99 713 aa15.05■□□□□ -0
TRAPPC12-219ENST00000479955 TAF1LQ8IZX4 1826 aa15.04■□□□□ -0
TRAPPC12-219ENST00000479955 COL5A3P25940 1745 aaPredicted RBP15.04■□□□□ -0
TRAPPC12-219ENST00000479955 A1BGP04217 495 aa15.04■□□□□ -0
TRAPPC12-219ENST00000479955 RARSP54136 660 aaKnown RBP15.04■□□□□ -0
TRAPPC12-219ENST00000479955 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
TRAPPC12-219ENST00000479955 KCNQ4P56696 695 aa15.04■□□□□ -0
TRAPPC12-219ENST00000479955 NBPF14Q5TI25 921 aa15.04■□□□□ -0
TRAPPC12-219ENST00000479955 AK7Q96M32 723 aa15.04■□□□□ -0
TRAPPC12-219ENST00000479955 SMC4Q9NTJ3 1288 aa15.04■□□□□ -0
TRAPPC12-219ENST00000479955 A0A087WZG4 1122 aa15.03■□□□□ -0
TRAPPC12-219ENST00000479955 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
TRAPPC12-219ENST00000479955 INTS5Q6P9B9 1019 aaKnown RBP15.03■□□□□ -0
TRAPPC12-219ENST00000479955 SSH1Q8WYL5 1049 aa15.03■□□□□ -0
TRAPPC12-219ENST00000479955 CHPF2Q9P2E5 772 aa15.03■□□□□ -0
TRAPPC12-219ENST00000479955 RTCBQ9Y3I0 505 aaKnown RBP15.03■□□□□ -0
TRAPPC12-219ENST00000479955 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
TRAPPC12-219ENST00000479955 RPS6KA4O75676 772 aa15.02■□□□□ -0
TRAPPC12-219ENST00000479955 MYL6BP14649 208 aa15.02■□□□□ -0
TRAPPC12-219ENST00000479955 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-219ENST00000479955 FLAD1Q8NFF5 587 aa15.02■□□□□ -0
TRAPPC12-219ENST00000479955 C4BP0C0L5 1744 aa15.02□□□□□ -0.01
TRAPPC12-219ENST00000479955 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 DDX58O95786 925 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 ADRA2BP18089 450 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 PDIA6Q15084 440 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 NBPF10Q6P3W6 841 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 NBPF15Q8N660 670 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 STK32BQ9NY57 414 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
TRAPPC12-219ENST00000479955 RREB1Q92766 1687 aa15□□□□□ -0.01
TRAPPC12-219ENST00000479955 PTPRCP08575 1304 aa15□□□□□ -0.01
TRAPPC12-219ENST00000479955 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
TRAPPC12-219ENST00000479955 GNPATO15228 680 aa15□□□□□ -0.01
TRAPPC12-219ENST00000479955 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
TRAPPC12-219ENST00000479955 TRAPPC3LQ5T215 181 aa15□□□□□ -0.01
TRAPPC12-219ENST00000479955 TFCP2L1Q9NZI6 479 aa15□□□□□ -0.01
TRAPPC12-219ENST00000479955 SSFA2P28290 1259 aa14.99□□□□□ -0.01
TRAPPC12-219ENST00000479955 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
TRAPPC12-219ENST00000479955 ARHGAP45Q92619 1136 aa14.99□□□□□ -0.01
TRAPPC12-219ENST00000479955 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
TRAPPC12-219ENST00000479955 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-219ENST00000479955 BCAR3O75815 825 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 MS4A1P11836 297 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 FLIIQ13045 1269 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 SLC15A2Q16348 729 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 PROSER3Q2NL68 480 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 COPS6Q7L5N1 327 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 BCL2L13Q9BXK5 485 aa14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
TRAPPC12-219ENST00000479955 RGL2O15211 777 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 ANXA1P04083 346 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 RFC4P35249 363 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 FKBP5Q13451 457 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 ANKRD13DQ6ZTN6 518 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 LRP10Q7Z4F1 713 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 XAGE3Q8WTP9 111 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 ARXQ96QS3 562 aa14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-219ENST00000479955 ERVV-1B6SEH8 477 aa14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 ZPR1O75312 459 aa14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 PIP4K2AP48426 406 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 AIMP1Q12904 312 aaKnown RBP14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 NUP188Q5SRE5 1749 aa14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 DZIP3Q86Y13 1208 aaKnown RBP14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 PLBD2Q8NHP8 589 aa14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 FRAT1Q92837 279 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 PHAXQ9H814 394 aaKnown RBP14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 NOB1Q9ULX3 412 aaKnown RBP14.96□□□□□ -0.01
TRAPPC12-219ENST00000479955 COL15A1P39059 1388 aa14.96□□□□□ -0.02
TRAPPC12-219ENST00000479955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.95□□□□□ -0.02
TRAPPC12-219ENST00000479955 KSR2Q6VAB6 950 aa14.95□□□□□ -0.02
TRAPPC12-219ENST00000479955 G2E3Q7L622 706 aa14.95□□□□□ -0.02
TRAPPC12-219ENST00000479955 RIC3Q7Z5B4 369 aa14.95□□□□□ -0.02
TRAPPC12-219ENST00000479955 NARFQ9UHQ1 456 aa14.95□□□□□ -0.02
TRAPPC12-219ENST00000479955 ZNF652Q9Y2D9 606 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms