RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
SEMA6C-206ENST00000479820 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
SEMA6C-206ENST00000479820 FKBP8Q14318 412 aa20.37■□□□□ 0.85
SEMA6C-206ENST00000479820 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
SEMA6C-206ENST00000479820 ADCY9O60503 1353 aa20.36■□□□□ 0.85
SEMA6C-206ENST00000479820 TGFB2P61812 414 aa20.36■□□□□ 0.85
SEMA6C-206ENST00000479820 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
SEMA6C-206ENST00000479820 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-206ENST00000479820 DDR1Q08345 913 aa20.35■□□□□ 0.85
SEMA6C-206ENST00000479820 PARP3Q9Y6F1 533 aa20.35■□□□□ 0.85
SEMA6C-206ENST00000479820 TM4SF1P30408 202 aa20.34■□□□□ 0.85
SEMA6C-206ENST00000479820 NARFQ9UHQ1 456 aa20.34■□□□□ 0.85
SEMA6C-206ENST00000479820 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.84
SEMA6C-206ENST00000479820 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-206ENST00000479820 HTATSF1O43719 755 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-206ENST00000479820 STARD3NLO95772 234 aa20.32■□□□□ 0.84
SEMA6C-206ENST00000479820 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-206ENST00000479820 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
SEMA6C-206ENST00000479820 TEX13AQ9BXU3 409 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-206ENST00000479820 ZPR1O75312 459 aa20.31■□□□□ 0.84
SEMA6C-206ENST00000479820 FMNL2Q96PY5 1086 aa20.31■□□□□ 0.84
SEMA6C-206ENST00000479820 BCL2L12Q9HB09 334 aa20.31■□□□□ 0.84
SEMA6C-206ENST00000479820 SBF1O95248 1867 aa20.3■□□□□ 0.84
SEMA6C-206ENST00000479820 PLEKHF1Q96S99 279 aa20.3■□□□□ 0.84
SEMA6C-206ENST00000479820 ATP10DQ9P241 1426 aa20.29■□□□□ 0.84
SEMA6C-206ENST00000479820 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
SEMA6C-206ENST00000479820 KCNQ3O43525 872 aa20.29■□□□□ 0.84
SEMA6C-206ENST00000479820 KCNA3P22001 575 aa20.29■□□□□ 0.84
SEMA6C-206ENST00000479820 DPEP1P16444 411 aa20.28■□□□□ 0.84
SEMA6C-206ENST00000479820 MCM10Q7L590 875 aa20.28■□□□□ 0.84
SEMA6C-206ENST00000479820 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
SEMA6C-206ENST00000479820 CANXP27824 592 aaKnown RBP20.27■□□□□ 0.84
SEMA6C-206ENST00000479820 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
SEMA6C-206ENST00000479820 NFIXQ14938 502 aa20.27■□□□□ 0.84
SEMA6C-206ENST00000479820 RALBP1Q15311 655 aa20.27■□□□□ 0.84
SEMA6C-206ENST00000479820 RTF1Q92541 710 aaKnown RBP20.27■□□□□ 0.84
SEMA6C-206ENST00000479820 COL11A2P13942 1736 aaPredicted RBP20.27■□□□□ 0.83
SEMA6C-206ENST00000479820 A0A087WZG4 1122 aa20.26■□□□□ 0.83
SEMA6C-206ENST00000479820 WWC3Q9ULE0 1092 aa20.26■□□□□ 0.83
SEMA6C-206ENST00000479820 ARFGEF2Q9Y6D5 1785 aa20.24■□□□□ 0.83
SEMA6C-206ENST00000479820 DCTN1Q14203 1278 aa20.24■□□□□ 0.83
SEMA6C-206ENST00000479820 A1BGP04217 495 aa20.22■□□□□ 0.83
SEMA6C-206ENST00000479820 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
SEMA6C-206ENST00000479820 BCS1LQ9Y276 419 aa20.22■□□□□ 0.83
SEMA6C-206ENST00000479820 CCDC88AQ3V6T2 1871 aa20.22■□□□□ 0.83
SEMA6C-206ENST00000479820 CARMIL3Q8ND23 1372 aa20.21■□□□□ 0.83
SEMA6C-206ENST00000479820 NUP98P52948 1817 aa20.21■□□□□ 0.83
SEMA6C-206ENST00000479820 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
SEMA6C-206ENST00000479820 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
SEMA6C-206ENST00000479820 PIM2Q9P1W9 311 aa20.21■□□□□ 0.83
SEMA6C-206ENST00000479820 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
SEMA6C-206ENST00000479820 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
SEMA6C-206ENST00000479820 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
SEMA6C-206ENST00000479820 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
SEMA6C-206ENST00000479820 SERPINB2P05120 415 aa20.2■□□□□ 0.82
SEMA6C-206ENST00000479820 C1QTNF8P60827 252 aa20.2■□□□□ 0.82
SEMA6C-206ENST00000479820 MYBBP1AQ9BQG0 1328 aaKnown RBP20.2■□□□□ 0.82
SEMA6C-206ENST00000479820 GIGYF1O75420 1035 aaPredicted RBP20.19■□□□□ 0.82
SEMA6C-206ENST00000479820 NEFMP07197 916 aa20.19■□□□□ 0.82
SEMA6C-206ENST00000479820 CHRNA5P30532 468 aa20.19■□□□□ 0.82
SEMA6C-206ENST00000479820 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-206ENST00000479820 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-206ENST00000479820 FER1L6Q2WGJ9 1857 aa20.18■□□□□ 0.82
SEMA6C-206ENST00000479820 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
SEMA6C-206ENST00000479820 DICER1Q9UPY3 1922 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-206ENST00000479820 RGL2O15211 777 aa20.17■□□□□ 0.82
SEMA6C-206ENST00000479820 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-206ENST00000479820 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
SEMA6C-206ENST00000479820 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-206ENST00000479820 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
SEMA6C-206ENST00000479820 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
SEMA6C-206ENST00000479820 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
SEMA6C-206ENST00000479820 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
SEMA6C-206ENST00000479820 TIAM2Q8IVF5 1701 aa20.14■□□□□ 0.81
SEMA6C-206ENST00000479820 CLEC4GQ6UXB4 293 aa20.14■□□□□ 0.81
SEMA6C-206ENST00000479820 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
SEMA6C-206ENST00000479820 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.81
SEMA6C-206ENST00000479820 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 PRR5LQ6MZQ0 368 aa20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 GPBP1L1Q9HC44 474 aaPredicted RBP20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 TNRC6CQ9HCJ0 1690 aaKnown RBP20.13■□□□□ 0.81
SEMA6C-206ENST00000479820 SLX4Q8IY92 1834 aa20.12■□□□□ 0.81
SEMA6C-206ENST00000479820 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-206ENST00000479820 BICDL1Q6ZP65 573 aa20.12■□□□□ 0.81
SEMA6C-206ENST00000479820 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
SEMA6C-206ENST00000479820 NPM2Q86SE8 214 aaKnown RBP20.11■□□□□ 0.81
SEMA6C-206ENST00000479820 BRIP1Q9BX63 1249 aa20.11■□□□□ 0.81
SEMA6C-206ENST00000479820 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
SEMA6C-206ENST00000479820 ANKRD36CQ5JPF3 1778 aa20.1■□□□□ 0.81
SEMA6C-206ENST00000479820 TMPOP42166 694 aaKnown RBP20.09■□□□□ 0.81
SEMA6C-206ENST00000479820 C2CD5Q86YS7 1000 aa20.09■□□□□ 0.81
SEMA6C-206ENST00000479820 TTLL6Q8N841 843 aa20.09■□□□□ 0.81
SEMA6C-206ENST00000479820 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
SEMA6C-206ENST00000479820 BABAM1Q9NWV8 329 aa20.09■□□□□ 0.81
SEMA6C-206ENST00000479820 CEP350Q5VT06 3117 aa20.09■□□□□ 0.81
SEMA6C-206ENST00000479820 H0YIN7 160 aa20.08■□□□□ 0.81
SEMA6C-206ENST00000479820 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms