RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 TMEM88BA6NKF7 163 aa15.6■□□□□ 0.09
CCDC18-208ENST00000479653 ERVV-2B6SEH9 535 aa15.6■□□□□ 0.09
CCDC18-208ENST00000479653 HSPA8P11142 646 aaKnown RBP15.6■□□□□ 0.09
CCDC18-208ENST00000479653 USPL1Q5W0Q7 1092 aa15.6■□□□□ 0.09
CCDC18-208ENST00000479653 C2CD5Q86YS7 1000 aa15.6■□□□□ 0.09
CCDC18-208ENST00000479653 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
CCDC18-208ENST00000479653 SBF1O95248 1867 aa15.6■□□□□ 0.09
CCDC18-208ENST00000479653 DDNO94850 711 aaPredicted RBP15.59■□□□□ 0.09
CCDC18-208ENST00000479653 CABP4P57796 275 aa15.59■□□□□ 0.09
CCDC18-208ENST00000479653 CFAP44Q96MT7 982 aa15.59■□□□□ 0.09
CCDC18-208ENST00000479653 H0YIN7 160 aa15.58■□□□□ 0.08
CCDC18-208ENST00000479653 RGS19P49795 217 aa15.57■□□□□ 0.08
CCDC18-208ENST00000479653 PASKQ96RG2 1323 aa15.57■□□□□ 0.08
CCDC18-208ENST00000479653 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
CCDC18-208ENST00000479653 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
CCDC18-208ENST00000479653 C21orf2O43822 256 aa15.56■□□□□ 0.08
CCDC18-208ENST00000479653 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
CCDC18-208ENST00000479653 MAP2K1Q02750 393 aaPredicted RBP15.56■□□□□ 0.08
CCDC18-208ENST00000479653 NFIXQ14938 502 aa15.56■□□□□ 0.08
CCDC18-208ENST00000479653 DEFB115Q30KQ5 88 aa15.56■□□□□ 0.08
CCDC18-208ENST00000479653 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
CCDC18-208ENST00000479653 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.087e-6■■□□□ 12.8
CCDC18-208ENST00000479653 TESK2Q96S53 571 aa15.56■□□□□ 0.08
CCDC18-208ENST00000479653 SERPINB2P05120 415 aa15.55■□□□□ 0.08
CCDC18-208ENST00000479653 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
CCDC18-208ENST00000479653 WASHC2AQ641Q2 1341 aa15.54■□□□□ 0.08
CCDC18-208ENST00000479653 IQCA1LA6NCM1 817 aa15.54■□□□□ 0.08
CCDC18-208ENST00000479653 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
CCDC18-208ENST00000479653 EAPPQ56P03 285 aaPredicted RBP15.54■□□□□ 0.08
CCDC18-208ENST00000479653 INTS5Q6P9B9 1019 aaKnown RBP15.54■□□□□ 0.08
CCDC18-208ENST00000479653 NCAPD2Q15021 1401 aa15.53■□□□□ 0.08
CCDC18-208ENST00000479653 WDR33Q9C0J8 1336 aaKnown RBP15.52■□□□□ 0.08
CCDC18-208ENST00000479653 ITGBL1O95965 494 aaPredicted RBP15.52■□□□□ 0.08
CCDC18-208ENST00000479653 MTHFSP49914 203 aa15.52■□□□□ 0.08
CCDC18-208ENST00000479653 NFATC2IPQ8NCF5 419 aa15.52■□□□□ 0.08
CCDC18-208ENST00000479653 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.08
CCDC18-208ENST00000479653 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
CCDC18-208ENST00000479653 ABT1Q9ULW3 272 aaKnown RBP15.52■□□□□ 0.08
CCDC18-208ENST00000479653 PLEKHO1Q53GL0 409 aaPredicted RBP15.51■□□□□ 0.07
CCDC18-208ENST00000479653 BICDL1Q6ZP65 573 aa15.51■□□□□ 0.07
CCDC18-208ENST00000479653 TAOK3Q9H2K8 898 aa15.51■□□□□ 0.07
CCDC18-208ENST00000479653 RASSF10A6NK89 507 aa15.5■□□□□ 0.07
CCDC18-208ENST00000479653 ZNF530Q6P9A1 599 aaPredicted RBP15.5■□□□□ 0.07
CCDC18-208ENST00000479653 NARFQ9UHQ1 456 aa15.5■□□□□ 0.07
CCDC18-208ENST00000479653 TIAM2Q8IVF5 1701 aa15.49■□□□□ 0.07
CCDC18-208ENST00000479653 GRM1Q13255 1194 aa15.49■□□□□ 0.07
CCDC18-208ENST00000479653 PAXIP1Q6ZW49 1069 aaPredicted RBP15.49■□□□□ 0.07
CCDC18-208ENST00000479653 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
CCDC18-208ENST00000479653 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
CCDC18-208ENST00000479653 MYH14Q7Z406 1995 aaKnown RBP15.48■□□□□ 0.07
CCDC18-208ENST00000479653 EIF4A2Q14240 407 aaKnown RBP15.48■□□□□ 0.07
CCDC18-208ENST00000479653 C1orf141Q5JVX7 400 aa15.48■□□□□ 0.07
CCDC18-208ENST00000479653 CNTROBQ8N137 903 aa15.48■□□□□ 0.07
CCDC18-208ENST00000479653 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
CCDC18-208ENST00000479653 SOS1Q07889 1333 aaPredicted RBP15.47■□□□□ 0.07
CCDC18-208ENST00000479653 PDE6BP35913 854 aa15.47■□□□□ 0.07
CCDC18-208ENST00000479653 MAP1SQ66K74 1059 aaPredicted RBP15.47■□□□□ 0.07
CCDC18-208ENST00000479653 CCDC24Q8N4L8 307 aa15.47■□□□□ 0.07
CCDC18-208ENST00000479653 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
CCDC18-208ENST00000479653 CARMIL3Q8ND23 1372 aa15.47■□□□□ 0.07
CCDC18-208ENST00000479653 AMOTQ4VCS5 1084 aa15.46■□□□□ 0.07
CCDC18-208ENST00000479653 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.07
CCDC18-208ENST00000479653 CARD14Q9BXL6 1004 aa15.46■□□□□ 0.07
CCDC18-208ENST00000479653 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
CCDC18-208ENST00000479653 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
CCDC18-208ENST00000479653 LTBP3Q9NS15 1303 aa15.45■□□□□ 0.06
CCDC18-208ENST00000479653 TNNT2P45379 298 aaPredicted RBP15.45■□□□□ 0.06
CCDC18-208ENST00000479653 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
CCDC18-208ENST00000479653 HACL1Q9UJ83 578 aa15.45■□□□□ 0.06
CCDC18-208ENST00000479653 PDZRN3Q9UPQ7 1066 aa15.45■□□□□ 0.06
CCDC18-208ENST00000479653 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
CCDC18-208ENST00000479653 EPHX2P34913 555 aa15.44■□□□□ 0.06
CCDC18-208ENST00000479653 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
CCDC18-208ENST00000479653 TRIM26Q12899 539 aaPredicted RBP15.44■□□□□ 0.06
CCDC18-208ENST00000479653 GPR101Q96P66 508 aaPredicted RBP15.44■□□□□ 0.06
CCDC18-208ENST00000479653 MCOLN1Q9GZU1 580 aa15.44■□□□□ 0.06
CCDC18-208ENST00000479653 COL15A1P39059 1388 aa15.44■□□□□ 0.06
CCDC18-208ENST00000479653 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
CCDC18-208ENST00000479653 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
CCDC18-208ENST00000479653 CNKSR1Q969H4 720 aa15.43■□□□□ 0.06
CCDC18-208ENST00000479653 CAPNS2Q96L46 248 aa15.43■□□□□ 0.06
CCDC18-208ENST00000479653 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
CCDC18-208ENST00000479653 CCDC88AQ3V6T2 1871 aa15.43■□□□□ 0.06
CCDC18-208ENST00000479653 NPHP1O15259 732 aa15.42■□□□□ 0.06
CCDC18-208ENST00000479653 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
CCDC18-208ENST00000479653 ECE1P42892 770 aa15.42■□□□□ 0.06
CCDC18-208ENST00000479653 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
CCDC18-208ENST00000479653 CYP4F22Q6NT55 531 aa15.42■□□□□ 0.06
CCDC18-208ENST00000479653 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
CCDC18-208ENST00000479653 DDX21Q9NR30 783 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC18-208ENST00000479653 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
CCDC18-208ENST00000479653 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
CCDC18-208ENST00000479653 TBC1D9BQ66K14 1250 aa15.4■□□□□ 0.06
CCDC18-208ENST00000479653 PRR5LQ6MZQ0 368 aa15.4■□□□□ 0.06
CCDC18-208ENST00000479653 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
CCDC18-208ENST00000479653 ZNF541Q9H0D2 1346 aa15.4■□□□□ 0.06
CCDC18-208ENST00000479653 VIRMAQ69YN4 1812 aaKnown RBP15.39■□□□□ 0.05
CCDC18-208ENST00000479653 DGKZQ13574 1117 aa15.39■□□□□ 0.05
CCDC18-208ENST00000479653 TNRC18O15417 2968 aaPredicted RBP15.39■□□□□ 0.05
CCDC18-208ENST00000479653 FMR1Q06787 632 aaKnown RBP eCLIP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms