RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
CMTM1-208ENST00000479381 YY1P25490 414 aa12.05□□□□□ -0.48
CMTM1-208ENST00000479381 RALBP1Q15311 655 aa12.04□□□□□ -0.48
CMTM1-208ENST00000479381 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
CMTM1-208ENST00000479381 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-208ENST00000479381 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
CMTM1-208ENST00000479381 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
CMTM1-208ENST00000479381 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
CMTM1-208ENST00000479381 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
CMTM1-208ENST00000479381 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-208ENST00000479381 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
CMTM1-208ENST00000479381 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
CMTM1-208ENST00000479381 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
CMTM1-208ENST00000479381 ZPR1O75312 459 aa12.02□□□□□ -0.49
CMTM1-208ENST00000479381 FCHSD2O94868 740 aa12.02□□□□□ -0.49
CMTM1-208ENST00000479381 WDR43Q15061 677 aaKnown RBP eCLIP12.02□□□□□ -0.49
CMTM1-208ENST00000479381 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
CMTM1-208ENST00000479381 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
CMTM1-208ENST00000479381 COL5A3P25940 1745 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-208ENST00000479381 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 STARD3NLO95772 234 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 MMP10P09238 476 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
CMTM1-208ENST00000479381 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
CMTM1-208ENST00000479381 MCM10Q7L590 875 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 NLGN2Q8NFZ4 835 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 MRC1P22897 1456 aa12.01□□□□□ -0.49
CMTM1-208ENST00000479381 TJP1Q07157 1748 aa12□□□□□ -0.49
CMTM1-208ENST00000479381 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
CMTM1-208ENST00000479381 NLGN1Q8N2Q7 840 aa12□□□□□ -0.49
CMTM1-208ENST00000479381 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
CMTM1-208ENST00000479381 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
CMTM1-208ENST00000479381 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
CMTM1-208ENST00000479381 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
CMTM1-208ENST00000479381 NPHP1O15259 732 aa11.99□□□□□ -0.49
CMTM1-208ENST00000479381 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
CMTM1-208ENST00000479381 ZNF790Q6PG37 636 aa11.99□□□□□ -0.49
CMTM1-208ENST00000479381 IL17REQ8NFR9 667 aa11.99□□□□□ -0.49
CMTM1-208ENST00000479381 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
CMTM1-208ENST00000479381 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
CMTM1-208ENST00000479381 COL15A1P39059 1388 aa11.97□□□□□ -0.49
CMTM1-208ENST00000479381 EVX2Q03828 476 aa11.97□□□□□ -0.49
CMTM1-208ENST00000479381 ZNF496Q96IT1 587 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-208ENST00000479381 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-208ENST00000479381 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
CMTM1-208ENST00000479381 CD2APQ9Y5K6 639 aa11.97□□□□□ -0.49
CMTM1-208ENST00000479381 MYH14Q7Z406 1995 aaKnown RBP11.97□□□□□ -0.49
CMTM1-208ENST00000479381 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
CMTM1-208ENST00000479381 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-208ENST00000479381 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 HEG1Q9ULI3 1381 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 CYP19A1P11511 503 aaPredicted RBP11.96□□□□□ -0.49
CMTM1-208ENST00000479381 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
CMTM1-208ENST00000479381 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
CMTM1-208ENST00000479381 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
CMTM1-208ENST00000479381 A0A087WZG4 1122 aa11.95□□□□□ -0.5
CMTM1-208ENST00000479381 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
CMTM1-208ENST00000479381 GYS1P13807 737 aa11.95□□□□□ -0.5
CMTM1-208ENST00000479381 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
CMTM1-208ENST00000479381 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
CMTM1-208ENST00000479381 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
CMTM1-208ENST00000479381 CHD4Q14839 1912 aa11.94□□□□□ -0.5
CMTM1-208ENST00000479381 DLG5Q8TDM6 1919 aa11.94□□□□□ -0.5
CMTM1-208ENST00000479381 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-208ENST00000479381 KCNQ3O43525 872 aa11.94□□□□□ -0.5
CMTM1-208ENST00000479381 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
CMTM1-208ENST00000479381 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
CMTM1-208ENST00000479381 TAF7Q15545 349 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-208ENST00000479381 PNISRQ8TF01 805 aaKnown RBP11.94□□□□□ -0.5
CMTM1-208ENST00000479381 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-208ENST00000479381 RIPK4P57078 832 aa11.93□□□□□ -0.5
CMTM1-208ENST00000479381 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
CMTM1-208ENST00000479381 MIS18AQ9NYP9 233 aa11.93□□□□□ -0.5
CMTM1-208ENST00000479381 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
CMTM1-208ENST00000479381 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
CMTM1-208ENST00000479381 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CMTM1-208ENST00000479381 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
CMTM1-208ENST00000479381 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-208ENST00000479381 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
CMTM1-208ENST00000479381 PIP4K2AP48426 406 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-208ENST00000479381 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
CMTM1-208ENST00000479381 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
CMTM1-208ENST00000479381 TSPYL4Q9UJ04 414 aa11.92□□□□□ -0.5
CMTM1-208ENST00000479381 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
CMTM1-208ENST00000479381 ANP32CO43423 234 aa11.91□□□□□ -0.5
CMTM1-208ENST00000479381 A1BGP04217 495 aa11.91□□□□□ -0.5
CMTM1-208ENST00000479381 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
CMTM1-208ENST00000479381 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-208ENST00000479381 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-208ENST00000479381 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-208ENST00000479381 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
CMTM1-208ENST00000479381 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-208ENST00000479381 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms