RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 CLSTN1O94985 981 aa13.56□□□□□ -0.24
GSDMB-209ENST00000479136 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
GSDMB-209ENST00000479136 MEGF6O75095 1541 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 RNMTO43148 476 aaKnown RBP13.55□□□□□ -0.24
GSDMB-209ENST00000479136 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
GSDMB-209ENST00000479136 IL2RBP14784 551 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 CEP120Q8N960 986 aa13.55□□□□□ -0.24
GSDMB-209ENST00000479136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.243e-7■■■□□ 19.1
GSDMB-209ENST00000479136 ERBB4Q15303 1308 aa13.54□□□□□ -0.24
GSDMB-209ENST00000479136 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
GSDMB-209ENST00000479136 IPO8O15397 1037 aaKnown RBP13.54□□□□□ -0.24
GSDMB-209ENST00000479136 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
GSDMB-209ENST00000479136 CLUAP1Q96AJ1 413 aa13.54□□□□□ -0.24
GSDMB-209ENST00000479136 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
GSDMB-209ENST00000479136 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
GSDMB-209ENST00000479136 KIF16BQ96L93 1317 aa13.53□□□□□ -0.24
GSDMB-209ENST00000479136 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
GSDMB-209ENST00000479136 PHKG2P15735 406 aa13.53□□□□□ -0.24
GSDMB-209ENST00000479136 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
GSDMB-209ENST00000479136 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
GSDMB-209ENST00000479136 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
GSDMB-209ENST00000479136 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.24
GSDMB-209ENST00000479136 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.25
GSDMB-209ENST00000479136 PLCD4Q9BRC7 762 aa13.51□□□□□ -0.25
GSDMB-209ENST00000479136 COG6Q9Y2V7 657 aa13.51□□□□□ -0.25
GSDMB-209ENST00000479136 JCADQ9P266 1359 aa13.51□□□□□ -0.25
GSDMB-209ENST00000479136 PATL2C9JE40 543 aaKnown RBP13.51□□□□□ -0.25
GSDMB-209ENST00000479136 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
GSDMB-209ENST00000479136 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
GSDMB-209ENST00000479136 TSPYL1Q9H0U9 437 aa13.51□□□□□ -0.25
GSDMB-209ENST00000479136 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
GSDMB-209ENST00000479136 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
GSDMB-209ENST00000479136 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
GSDMB-209ENST00000479136 CYP27B1O15528 508 aa13.49□□□□□ -0.25
GSDMB-209ENST00000479136 DCAF5Q96JK2 942 aa13.49□□□□□ -0.25
GSDMB-209ENST00000479136 TRIM27P14373 513 aa13.48□□□□□ -0.25
GSDMB-209ENST00000479136 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
GSDMB-209ENST00000479136 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
GSDMB-209ENST00000479136 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
GSDMB-209ENST00000479136 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
GSDMB-209ENST00000479136 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
GSDMB-209ENST00000479136 PANK2Q9BZ23 570 aa13.48□□□□□ -0.25
GSDMB-209ENST00000479136 RLBP1P12271 317 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 CABP4P57796 275 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 ZSCAN30Q86W11 494 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 ITPRIPQ8IWB1 547 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
GSDMB-209ENST00000479136 KCNQ3O43525 872 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 HSPA1LP34931 641 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
GSDMB-209ENST00000479136 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
GSDMB-209ENST00000479136 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
GSDMB-209ENST00000479136 EIF4A1P60842 406 aaKnown RBP13.46□□□□□ -0.25
GSDMB-209ENST00000479136 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
GSDMB-209ENST00000479136 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.25
GSDMB-209ENST00000479136 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
GSDMB-209ENST00000479136 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
GSDMB-209ENST00000479136 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
GSDMB-209ENST00000479136 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
GSDMB-209ENST00000479136 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
GSDMB-209ENST00000479136 ARHGAP45Q92619 1136 aa13.45□□□□□ -0.26
GSDMB-209ENST00000479136 API5Q9BZZ5 524 aaKnown RBP13.45□□□□□ -0.26
GSDMB-209ENST00000479136 EXOC5O00471 708 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 SPATA31A6Q5VVP1 1343 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 CGNQ9P2M7 1197 aaKnown RBP13.44□□□□□ -0.26
GSDMB-209ENST00000479136 UQCRHLA0A096LP55 91 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 UQCRHP07919 91 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 GRPEL1Q9HAV7 217 aa13.44□□□□□ -0.26
GSDMB-209ENST00000479136 PLCH1Q4KWH8 1693 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 HS1BP3Q53T59 392 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 EFCC1Q9HA90 598 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 CSPP1Q1MSJ5 1256 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 ZNF790Q6PG37 636 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 UNC5CLQ8IV45 518 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 CDCA7Q9BWT1 371 aaPredicted RBP13.43□□□□□ -0.26
GSDMB-209ENST00000479136 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
GSDMB-209ENST00000479136 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
GSDMB-209ENST00000479136 SLC4A3P48751 1232 aa13.42□□□□□ -0.26
GSDMB-209ENST00000479136 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
GSDMB-209ENST00000479136 TMED8Q6PL24 325 aaPredicted RBP13.42□□□□□ -0.26
GSDMB-209ENST00000479136 PTPRCP08575 1304 aa13.42□□□□□ -0.26
GSDMB-209ENST00000479136 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms