RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 SCN7AQ01118 1682 aa10.13□□□□□ -0.79
RN7SL549P-201ENST00000478997 YY1P25490 414 aa10.13□□□□□ -0.79
RN7SL549P-201ENST00000478997 NFE2L2Q16236 605 aa10.13□□□□□ -0.79
RN7SL549P-201ENST00000478997 MCM10Q7L590 875 aa10.13□□□□□ -0.79
RN7SL549P-201ENST00000478997 PRKRIP1Q9H875 184 aaPredicted RBP10.13□□□□□ -0.79
RN7SL549P-201ENST00000478997 MAPK8IP3Q9UPT6 1336 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 PXDNLA1KZ92 1463 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 LAMB4A4D0S4 1761 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 GRIN3BO60391 1043 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 EIF5P55010 431 aaKnown RBP10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 TAF7Q15545 349 aaPredicted RBP10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 GPR162Q16538 588 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 SRP68Q9UHB9 627 aaKnown RBP10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 NARFQ9UHQ1 456 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 NRXN2Q9P2S2 1712 aa10.12□□□□□ -0.79
RN7SL549P-201ENST00000478997 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 A0A087WZG4 1122 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 KCNQ3O43525 872 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 ZPR1O75312 459 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 TGFB2P61812 414 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 FKBP8Q14318 412 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 PARP3Q9Y6F1 533 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 BCORQ6W2J9 1755 aa10.11□□□□□ -0.79
RN7SL549P-201ENST00000478997 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 TM4SF1P30408 202 aa10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 DDR1Q08345 913 aa10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
RN7SL549P-201ENST00000478997 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
RN7SL549P-201ENST00000478997 RGL2O15211 777 aa10.09□□□□□ -0.79
RN7SL549P-201ENST00000478997 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
RN7SL549P-201ENST00000478997 N4BP2Q86UW6 1770 aaPredicted RBP10.09□□□□□ -0.79
RN7SL549P-201ENST00000478997 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
RN7SL549P-201ENST00000478997 LMOD3Q0VAK6 560 aa10.08□□□□□ -0.8
RN7SL549P-201ENST00000478997 NFIXQ14938 502 aa10.08□□□□□ -0.8
RN7SL549P-201ENST00000478997 PELP1Q8IZL8 1130 aaKnown RBP10.08□□□□□ -0.8
RN7SL549P-201ENST00000478997 BABAM1Q9NWV8 329 aa10.08□□□□□ -0.8
RN7SL549P-201ENST00000478997 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
RN7SL549P-201ENST00000478997 A1BGP04217 495 aa10.07□□□□□ -0.8
RN7SL549P-201ENST00000478997 WDR43Q15061 677 aaKnown RBP eCLIP10.07□□□□□ -0.8
RN7SL549P-201ENST00000478997 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
RN7SL549P-201ENST00000478997 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
RN7SL549P-201ENST00000478997 DLEC1Q9Y238 1755 aa10.06□□□□□ -0.8
RN7SL549P-201ENST00000478997 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
RN7SL549P-201ENST00000478997 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
RN7SL549P-201ENST00000478997 RIPK4P57078 832 aa10.06□□□□□ -0.8
RN7SL549P-201ENST00000478997 EIF4A1P60842 406 aaKnown RBP10.06□□□□□ -0.8
RN7SL549P-201ENST00000478997 THUMPD2Q9BTF0 503 aaKnown RBP10.06□□□□□ -0.8
RN7SL549P-201ENST00000478997 ADCY9O60503 1353 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 CARMIL3Q8ND23 1372 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 DPEP1P16444 411 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 KCNA3P22001 575 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 CLEC4GQ6UXB4 293 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 NPM2Q86SE8 214 aaKnown RBP10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 MIS18AQ9NYP9 233 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 ADAMTS8Q9UP79 889 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
RN7SL549P-201ENST00000478997 A0A0G2JLW4 131 aa10.04□□□□□ -0.8
RN7SL549P-201ENST00000478997 SERPINB2P05120 415 aa10.04□□□□□ -0.8
RN7SL549P-201ENST00000478997 TBC1D9BQ66K14 1250 aa10.04□□□□□ -0.8
RN7SL549P-201ENST00000478997 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
RN7SL549P-201ENST00000478997 TBC1D2BQ9UPU7 963 aa10.04□□□□□ -0.8
RN7SL549P-201ENST00000478997 ANKRD31Q8N7Z5 1873 aa10.04□□□□□ -0.8
RN7SL549P-201ENST00000478997 CCDC146Q8IYE0 955 aa10.03□□□□□ -0.8
RN7SL549P-201ENST00000478997 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
RN7SL549P-201ENST00000478997 TSPYL4Q9UJ04 414 aa10.03□□□□□ -0.8
RN7SL549P-201ENST00000478997 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
RN7SL549P-201ENST00000478997 ZNF652Q9Y2D9 606 aa10.03□□□□□ -0.8
RN7SL549P-201ENST00000478997 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
RN7SL549P-201ENST00000478997 CHL1O00533 1208 aa10.02□□□□□ -0.81
RN7SL549P-201ENST00000478997 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
RN7SL549P-201ENST00000478997 PDZRN3Q9UPQ7 1066 aa10.02□□□□□ -0.81
RN7SL549P-201ENST00000478997 BCS1LQ9Y276 419 aa10.02□□□□□ -0.81
RN7SL549P-201ENST00000478997 RRP7AQ9Y3A4 280 aaKnown RBP10.02□□□□□ -0.81
RN7SL549P-201ENST00000478997 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 CHRNA5P30532 468 aa10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 PRR5LQ6MZQ0 368 aa10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 BICDL1Q6ZP65 573 aa10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 SETDB2Q96T68 719 aa10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 COL11A2P13942 1736 aaPredicted RBP10.01□□□□□ -0.81
RN7SL549P-201ENST00000478997 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
RN7SL549P-201ENST00000478997 PDE6BP35913 854 aa10□□□□□ -0.81
RN7SL549P-201ENST00000478997 LRP10Q7Z4F1 713 aa10□□□□□ -0.81
RN7SL549P-201ENST00000478997 CNBD1Q8NA66 436 aa10□□□□□ -0.81
RN7SL549P-201ENST00000478997 WWC3Q9ULE0 1092 aa10□□□□□ -0.81
RN7SL549P-201ENST00000478997 NUP98P52948 1817 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms