RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
LRRFIP1-211ENST00000478958 MBD3O95983 291 aa13.28□□□□□ -0.28
LRRFIP1-211ENST00000478958 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
LRRFIP1-211ENST00000478958 CHMLP26374 656 aa13.28□□□□□ -0.28
LRRFIP1-211ENST00000478958 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
LRRFIP1-211ENST00000478958 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
LRRFIP1-211ENST00000478958 LRRFIP2Q9Y608 721 aaKnown RBP13.28□□□□□ -0.28
LRRFIP1-211ENST00000478958 GABPB1Q06547 395 aaPredicted RBP13.27□□□□□ -0.28
LRRFIP1-211ENST00000478958 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.28
LRRFIP1-211ENST00000478958 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
LRRFIP1-211ENST00000478958 ACEP12821 1306 aa13.27□□□□□ -0.29
LRRFIP1-211ENST00000478958 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.29
LRRFIP1-211ENST00000478958 FLIIQ13045 1269 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 USP48Q86UV5 1035 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 CLTCQ00610 1675 aaKnown RBP13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 TSPYL1Q9H0U9 437 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
LRRFIP1-211ENST00000478958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 LTV1Q96GA3 475 aaPredicted RBP13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 FEZ1Q99689 392 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 CAPN2P17655 700 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 PSEN1P49768 467 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 PREX1Q8TCU6 1659 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
LRRFIP1-211ENST00000478958 NEO1Q92859 1461 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 CPA1P15085 419 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 MCM2P49736 904 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 OGFRQ9NZT2 677 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 AMPHP49418 695 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 SYAP1Q96A49 352 aaPredicted RBP13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 YY1AP1Q9H869 796 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
LRRFIP1-211ENST00000478958 FIBPO43427 364 aa13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 CUL4AQ13619 759 aa13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 TTC12Q9H892 705 aaPredicted RBP13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 GEMIN8Q9NWZ8 242 aaKnown RBP13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 A2ML1A8K2U0 1454 aa13.23□□□□□ -0.29
LRRFIP1-211ENST00000478958 TULP2O00295 520 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 GNAI3P08754 354 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 HCLS1P14317 486 aaPredicted RBP13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 CRB1P82279 1406 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
LRRFIP1-211ENST00000478958 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
LRRFIP1-211ENST00000478958 TNNT3P45378 269 aaPredicted RBP13.21□□□□□ -0.29
LRRFIP1-211ENST00000478958 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
LRRFIP1-211ENST00000478958 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
LRRFIP1-211ENST00000478958 EYA1Q99502 592 aa13.21□□□□□ -0.29
LRRFIP1-211ENST00000478958 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
LRRFIP1-211ENST00000478958 FAM193AP78312 1265 aa13.21□□□□□ -0.3
LRRFIP1-211ENST00000478958 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.3
LRRFIP1-211ENST00000478958 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.3
LRRFIP1-211ENST00000478958 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.3
LRRFIP1-211ENST00000478958 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.3
LRRFIP1-211ENST00000478958 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
LRRFIP1-211ENST00000478958 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
LRRFIP1-211ENST00000478958 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
LRRFIP1-211ENST00000478958 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
LRRFIP1-211ENST00000478958 ANAPC15P60006 121 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 PHF14O94880 888 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 ADCY5O95622 1261 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 ANXA1P04083 346 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
LRRFIP1-211ENST00000478958 AK2P54819 239 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 OS9Q13438 667 aaPredicted RBP13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 EFCC1Q9HA90 598 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 SYT1P21579 422 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 HSPA4P34932 840 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
LRRFIP1-211ENST00000478958 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
LRRFIP1-211ENST00000478958 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms