RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 MYL6BP14649 208 aa5.15□□□□□ -1.59
USP25-208ENST00000478932 DCAF5Q96JK2 942 aa5.15□□□□□ -1.59
USP25-208ENST00000478932 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.15□□□□□ -1.593e-7■■□□□ 14.2
USP25-208ENST00000478932 USP16Q9Y5T5 823 aa5.15□□□□□ -1.59
USP25-208ENST00000478932 LRRFIP2Q9Y608 721 aaKnown RBP5.15□□□□□ -1.59
USP25-208ENST00000478932 WDR17Q8IZU2 1322 aa5.15□□□□□ -1.59
USP25-208ENST00000478932 NCAPD2Q15021 1401 aa5.15□□□□□ -1.59
USP25-208ENST00000478932 SRCAPQ6ZRS2 3230 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 BTG4Q9NY30 223 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 CPDO75976 1380 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 ATP10DQ9P241 1426 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 PHRF1Q9P1Y6 1649 aaKnown RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 CAMTA1Q9Y6Y1 1673 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 PTCD1O75127 700 aaKnown RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 GNAI3P08754 354 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 HOXB7P09629 217 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 UBTFL1P0CB47 393 aaPredicted RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 MFAP1P55081 439 aaKnown RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 CABP4P57796 275 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 NBR1Q14596 966 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 PDIA6Q15084 440 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 CWF19L2Q2TBE0 894 aaKnown RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 PLEKHM2Q8IWE5 1019 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 ZCRB1Q8TBF4 217 aaKnown RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 DNAAF4Q8WXU2 420 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 SRCIN1Q9C0H9 1055 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 MAP3K2Q9Y2U5 619 aa5.14□□□□□ -1.59
USP25-208ENST00000478932 SOS1Q07889 1333 aaPredicted RBP5.14□□□□□ -1.59
USP25-208ENST00000478932 BEND3Q5T5X7 828 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 TSHZ3Q63HK5 1081 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 TTC5Q8N0Z6 440 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 UPF2Q9HAU5 1272 aaKnown RBP5.13□□□□□ -1.59
USP25-208ENST00000478932 DAXXQ9UER7 740 aaPredicted RBP5.13□□□□□ -1.59
USP25-208ENST00000478932 KDM6AO15550 1401 aaPredicted RBP5.13□□□□□ -1.59
USP25-208ENST00000478932 HEG1Q9ULI3 1381 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 HMMRO75330 724 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 ADAMTS2O95450 1211 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 BMP2KLQ5H9B9 411 aa5.13□□□□□ -1.59
USP25-208ENST00000478932 SPDYE1Q8NFV5 336 aaPredicted RBP5.13□□□□□ -1.59
USP25-208ENST00000478932 DDX21Q9NR30 783 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP25-208ENST00000478932 IL2RBP14784 551 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 GSPT1P15170 499 aaKnown RBP5.12□□□□□ -1.59
USP25-208ENST00000478932 PIP4K2BP78356 416 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 ATP8B2P98198 1209 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 KSR2Q6VAB6 950 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 COPS6Q7L5N1 327 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 PPP1R42Q7Z4L9 355 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 TBC1D32Q96NH3 1257 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 CARD10Q9BWT7 1032 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 CHMP4AQ9BY43 222 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 IL1RAPL2Q9NP60 686 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 C9orf78Q9NZ63 289 aaPredicted RBP5.12□□□□□ -1.59
USP25-208ENST00000478932 LRRC37A3O60309 1634 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 ADCY9O60503 1353 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 SRGAP3O43295 1099 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 SNRPA1P09661 255 aaKnown RBP5.12□□□□□ -1.59
USP25-208ENST00000478932 RIC3Q7Z5B4 369 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 JARID2Q92833 1246 aaPredicted RBP5.12□□□□□ -1.59
USP25-208ENST00000478932 HYPKQ9NX55 129 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 UTRNP46939 3433 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 COL18A1P39060 1754 aa5.12□□□□□ -1.59
USP25-208ENST00000478932 SURF6O75683 361 aaKnown RBP5.11□□□□□ -1.59
USP25-208ENST00000478932 HSP90AB1P08238 724 aaKnown RBP5.11□□□□□ -1.59
USP25-208ENST00000478932 TBC1D9Q6ZT07 1266 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 XAGE3Q8WTP9 111 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 DDRGK1Q96HY6 314 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 FMNL2Q96PY5 1086 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 C22orf23Q9BZE7 217 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 COL5A2P05997 1499 aaPredicted RBP5.11□□□□□ -1.59
USP25-208ENST00000478932 NUTM2BA6NNL0 878 aaPredicted RBP5.11□□□□□ -1.59
USP25-208ENST00000478932 NUTM2EB1AL46 878 aaPredicted RBP5.11□□□□□ -1.59
USP25-208ENST00000478932 A1BGP04217 495 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 ANKRD13DQ6ZTN6 518 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 NUTM2AQ8IVF1 878 aaPredicted RBP5.11□□□□□ -1.59
USP25-208ENST00000478932 LRRCC1Q9C099 1032 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 PCDH11XQ9BZA7 1347 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 PCDH11YQ9BZA8 1340 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 CACNA1FO60840 1977 aa5.11□□□□□ -1.59
USP25-208ENST00000478932 ATP5J2-PTCD1G3V325 749 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 IGKV5-2P06315 115 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 SDSP20132 328 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 PDE1AP54750 535 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 RTL5Q5HYW3 569 aaPredicted RBP5.1□□□□□ -1.59
USP25-208ENST00000478932 SPRYD3Q8NCJ5 442 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 LINS1Q8NG48 757 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 SSH3Q8TE77 659 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 SYTL4Q96C24 671 aaPredicted RBP5.1□□□□□ -1.59
USP25-208ENST00000478932 ASAP1Q9ULH1 1129 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 LMO7Q8WWI1 1683 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 OVOS2A0A0G2JMS6 1433 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 NBPF26B4DH59 902 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 DDX58O95786 925 aaKnown RBP5.1□□□□□ -1.59
USP25-208ENST00000478932 TTC22Q5TAA0 569 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 NBPF14Q5TI25 921 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 NBPF10Q6P3W6 841 aaKnown RBP5.1□□□□□ -1.59
USP25-208ENST00000478932 LRP10Q7Z4F1 713 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 NUTM1Q86Y26 1132 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 NBPF15Q8N660 670 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 KAZALD1Q96I82 304 aa5.1□□□□□ -1.59
USP25-208ENST00000478932 ARXQ96QS3 562 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 400.9 ms