RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 GOLGA6L22H0YM25 854 aa18.3■□□□□ 0.52
ITSN2-211ENST00000478720 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
ITSN2-211ENST00000478720 ADAMTS7Q9UKP4 1686 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 RILPL2Q969X0 211 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 IL17RAQ96F46 866 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 MST1RQ04912 1400 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
ITSN2-211ENST00000478720 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
ITSN2-211ENST00000478720 NBPF7P0C2Y1 421 aaPredicted RBP18.28■□□□□ 0.52
ITSN2-211ENST00000478720 MCCP23508 829 aa18.28■□□□□ 0.52
ITSN2-211ENST00000478720 ANAPC15P60006 121 aa18.28■□□□□ 0.52
ITSN2-211ENST00000478720 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
ITSN2-211ENST00000478720 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
ITSN2-211ENST00000478720 UNC5CLQ8IV45 518 aa18.28■□□□□ 0.52
ITSN2-211ENST00000478720 RHPN1Q8TCX5 695 aa18.28■□□□□ 0.52
ITSN2-211ENST00000478720 ARXQ96QS3 562 aa18.28■□□□□ 0.52
ITSN2-211ENST00000478720 SRGAP3O43295 1099 aa18.27■□□□□ 0.52
ITSN2-211ENST00000478720 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.52
ITSN2-211ENST00000478720 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.52
ITSN2-211ENST00000478720 GRPEL1Q9HAV7 217 aa18.27■□□□□ 0.52
ITSN2-211ENST00000478720 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
ITSN2-211ENST00000478720 MCM2P49736 904 aa18.27■□□□□ 0.51
ITSN2-211ENST00000478720 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
ITSN2-211ENST00000478720 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
ITSN2-211ENST00000478720 PANK2Q9BZ23 570 aa18.26■□□□□ 0.51
ITSN2-211ENST00000478720 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
ITSN2-211ENST00000478720 ANXA1P04083 346 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 NEK4P51957 841 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 PI4K2BQ8TCG2 481 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 C1orf167Q5SNV9 1468 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 CRYBG1Q9Y4K1 1723 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 ANO2Q9NQ90 1003 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
ITSN2-211ENST00000478720 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
ITSN2-211ENST00000478720 MTX1Q13505 466 aa18.24■□□□□ 0.51
ITSN2-211ENST00000478720 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
ITSN2-211ENST00000478720 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
ITSN2-211ENST00000478720 PKP1Q13835 747 aa18.23■□□□□ 0.51
ITSN2-211ENST00000478720 LMOD2Q6P5Q4 547 aa18.23■□□□□ 0.51
ITSN2-211ENST00000478720 TMX3Q96JJ7 454 aa18.23■□□□□ 0.51
ITSN2-211ENST00000478720 CUL4AQ13619 759 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 PROSER2Q86WR7 435 aaPredicted RBP18.22■□□□□ 0.51
ITSN2-211ENST00000478720 GAS2L3Q86XJ1 694 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
ITSN2-211ENST00000478720 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
ITSN2-211ENST00000478720 DDX49Q9Y6V7 483 aaKnown RBP18.21■□□□□ 0.51
ITSN2-211ENST00000478720 ERBB3P21860 1342 aa18.21■□□□□ 0.51
ITSN2-211ENST00000478720 IL25Q9H293 177 aa18.2■□□□□ 0.5
ITSN2-211ENST00000478720 LMBRD1Q9NUN5 540 aa18.2■□□□□ 0.5
ITSN2-211ENST00000478720 HYPKQ9NX55 129 aa18.2■□□□□ 0.5
ITSN2-211ENST00000478720 HSPA4P34932 840 aa18.2■□□□□ 0.5
ITSN2-211ENST00000478720 HDAC5Q9UQL6 1122 aa18.2■□□□□ 0.5
ITSN2-211ENST00000478720 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
ITSN2-211ENST00000478720 TTC41PQ6P2S7 1318 aa18.19■□□□□ 0.5
ITSN2-211ENST00000478720 CNTROBQ8N137 903 aa18.19■□□□□ 0.5
ITSN2-211ENST00000478720 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
ITSN2-211ENST00000478720 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
ITSN2-211ENST00000478720 SGSM2O43147 1006 aa18.18■□□□□ 0.5
ITSN2-211ENST00000478720 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
ITSN2-211ENST00000478720 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
ITSN2-211ENST00000478720 MAP4K4O95819 1239 aaPredicted RBP18.18■□□□□ 0.5
ITSN2-211ENST00000478720 ABCC6O95255 1503 aa18.18■□□□□ 0.5
ITSN2-211ENST00000478720 UTYO14607 1347 aa18.18■□□□□ 0.5
ITSN2-211ENST00000478720 RAD50Q92878 1312 aa18.18■□□□□ 0.5
ITSN2-211ENST00000478720 RRAGDQ9NQL2 400 aaPredicted RBP18.17■□□□□ 0.5
ITSN2-211ENST00000478720 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
ITSN2-211ENST00000478720 GLRX3O76003 335 aaKnown RBP18.16■□□□□ 0.5
ITSN2-211ENST00000478720 OS9Q13438 667 aaPredicted RBP18.16■□□□□ 0.5
ITSN2-211ENST00000478720 LINS1Q8NG48 757 aa18.16■□□□□ 0.5
ITSN2-211ENST00000478720 C5P01031 1676 aa18.16■□□□□ 0.5
ITSN2-211ENST00000478720 COL18A1P39060 1754 aa18.16■□□□□ 0.5
ITSN2-211ENST00000478720 PDIA6Q15084 440 aa18.16■□□□□ 0.5
ITSN2-211ENST00000478720 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
ITSN2-211ENST00000478720 LSG1Q9H089 658 aaKnown RBP18.16■□□□□ 0.5
ITSN2-211ENST00000478720 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
ITSN2-211ENST00000478720 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
ITSN2-211ENST00000478720 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
ITSN2-211ENST00000478720 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
ITSN2-211ENST00000478720 BRD1O95696 1058 aa18.15■□□□□ 0.5
ITSN2-211ENST00000478720 ZNF445P59923 1031 aa18.15■□□□□ 0.5
ITSN2-211ENST00000478720 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
ITSN2-211ENST00000478720 GRM8O00222 908 aa18.14■□□□□ 0.49
ITSN2-211ENST00000478720 RAPGEF4Q8WZA2 1011 aa18.14■□□□□ 0.49
ITSN2-211ENST00000478720 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
ITSN2-211ENST00000478720 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
ITSN2-211ENST00000478720 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
ITSN2-211ENST00000478720 SLC52A2Q9HAB3 445 aa18.13■□□□□ 0.49
ITSN2-211ENST00000478720 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms