RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 SLFN5Q08AF3 891 aa15.21■□□□□ 0.03
PDCD11-204ENST00000478543 TEFQ10587 303 aa15.21■□□□□ 0.03
PDCD11-204ENST00000478543 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
PDCD11-204ENST00000478543 CEMIPQ8WUJ3 1361 aa15.21■□□□□ 0.02
PDCD11-204ENST00000478543 PALLDQ8WX93 1383 aa15.21■□□□□ 0.02
PDCD11-204ENST00000478543 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
PDCD11-204ENST00000478543 TSR2Q969E8 191 aaKnown RBP15.2■□□□□ 0.02
PDCD11-204ENST00000478543 PXDNLA1KZ92 1463 aa15.2■□□□□ 0.02
PDCD11-204ENST00000478543 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
PDCD11-204ENST00000478543 PHF14O94880 888 aa15.19■□□□□ 0.02
PDCD11-204ENST00000478543 GNAI1P63096 354 aa15.19■□□□□ 0.02
PDCD11-204ENST00000478543 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
PDCD11-204ENST00000478543 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
PDCD11-204ENST00000478543 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
PDCD11-204ENST00000478543 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
PDCD11-204ENST00000478543 ITGB4P16144 1822 aa15.19■□□□□ 0.02
PDCD11-204ENST00000478543 JMYQ8N9B5 988 aa15.18■□□□□ 0.02
PDCD11-204ENST00000478543 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 MRC1P22897 1456 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
PDCD11-204ENST00000478543 ZNF853P0CG23 659 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 CABP4P57796 275 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
PDCD11-204ENST00000478543 DUSP27Q5VZP5 1158 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 KLRG1Q96E93 195 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 MBIPQ9NS73 344 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
PDCD11-204ENST00000478543 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
PDCD11-204ENST00000478543 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
PDCD11-204ENST00000478543 BRCA1P38398 1863 aaKnown RBP15.16■□□□□ 0.02
PDCD11-204ENST00000478543 BTBD11A6QL63 1104 aa15.15■□□□□ 0.02
PDCD11-204ENST00000478543 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
PDCD11-204ENST00000478543 CHL1O00533 1208 aa15.15■□□□□ 0.02
PDCD11-204ENST00000478543 NFATC2IPQ8NCF5 419 aa15.15■□□□□ 0.02
PDCD11-204ENST00000478543 LINC00116Q8NCU8 138 aa15.15■□□□□ 0.02
PDCD11-204ENST00000478543 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
PDCD11-204ENST00000478543 PRELPP51888 382 aa15.14■□□□□ 0.01
PDCD11-204ENST00000478543 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
PDCD11-204ENST00000478543 EXOSC9Q06265 439 aaKnown RBP15.13■□□□□ 0.01
PDCD11-204ENST00000478543 AK7Q96M32 723 aa15.13■□□□□ 0.01
PDCD11-204ENST00000478543 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
PDCD11-204ENST00000478543 KCNQ3O43525 872 aa15.12■□□□□ 0.01
PDCD11-204ENST00000478543 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
PDCD11-204ENST00000478543 TNS4Q8IZW8 715 aa15.12■□□□□ 0.01
PDCD11-204ENST00000478543 BCS1LQ9Y276 419 aa15.12■□□□□ 0.01
PDCD11-204ENST00000478543 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
PDCD11-204ENST00000478543 C10orf71Q711Q0 1435 aa15.11■□□□□ 0.01
PDCD11-204ENST00000478543 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
PDCD11-204ENST00000478543 ITPK1Q13572 414 aa15.11■□□□□ 0.01
PDCD11-204ENST00000478543 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
PDCD11-204ENST00000478543 RBM46Q8TBY0 533 aaKnown RBP15.11■□□□□ 0.01
PDCD11-204ENST00000478543 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
PDCD11-204ENST00000478543 ELL2O00472 640 aaPredicted RBP15.1■□□□□ 0.01
PDCD11-204ENST00000478543 MMP10P09238 476 aa15.1■□□□□ 0.01
PDCD11-204ENST00000478543 SSFA2P28290 1259 aa15.1■□□□□ 0.01
PDCD11-204ENST00000478543 PIGBQ92521 554 aa15.1■□□□□ 0.01
PDCD11-204ENST00000478543 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
PDCD11-204ENST00000478543 C8orf58Q8NAV2 365 aa15.09■□□□□ 0.01
PDCD11-204ENST00000478543 KCNA3P22001 575 aa15.08■□□□□ 0
PDCD11-204ENST00000478543 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
PDCD11-204ENST00000478543 ZNF790Q6PG37 636 aa15.08■□□□□ 0
PDCD11-204ENST00000478543 ARHGAP27Q6ZUM4 889 aa15.08■□□□□ 0
PDCD11-204ENST00000478543 TSPYL6Q8N831 410 aa15.08■□□□□ 0
PDCD11-204ENST00000478543 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0
PDCD11-204ENST00000478543 C4AP0C0L4 1744 aa15.07■□□□□ 0
PDCD11-204ENST00000478543 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
PDCD11-204ENST00000478543 DPEP1P16444 411 aa15.07■□□□□ 0
PDCD11-204ENST00000478543 SIK1P57059 783 aa15.07■□□□□ 0
PDCD11-204ENST00000478543 TWISTNBQ3B726 338 aaPredicted RBP15.07■□□□□ 0
PDCD11-204ENST00000478543 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
PDCD11-204ENST00000478543 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
PDCD11-204ENST00000478543 GNPATO15228 680 aa15.06■□□□□ 0
PDCD11-204ENST00000478543 PTCD1O75127 700 aaKnown RBP15.05■□□□□ -0
PDCD11-204ENST00000478543 TGFB2P61812 414 aa15.05■□□□□ -0
PDCD11-204ENST00000478543 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
PDCD11-204ENST00000478543 ATG3Q9NT62 314 aa15.05■□□□□ -0
PDCD11-204ENST00000478543 RCAN3Q9UKA8 241 aa15.05■□□□□ -0
PDCD11-204ENST00000478543 UBR2Q8IWV8 1755 aa15.05■□□□□ -0
PDCD11-204ENST00000478543 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
PDCD11-204ENST00000478543 VAMP4O75379 141 aa15.04■□□□□ -0
PDCD11-204ENST00000478543 FSTL1Q12841 308 aa15.04■□□□□ -0
PDCD11-204ENST00000478543 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
PDCD11-204ENST00000478543 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
PDCD11-204ENST00000478543 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
PDCD11-204ENST00000478543 SBF1O95248 1867 aa15.03■□□□□ -0
PDCD11-204ENST00000478543 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
PDCD11-204ENST00000478543 TCERG1O14776 1098 aaKnown RBP15.03■□□□□ -0
PDCD11-204ENST00000478543 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
PDCD11-204ENST00000478543 HSPA1AP0DMV8 641 aaKnown RBP15.03■□□□□ -0
PDCD11-204ENST00000478543 HSPA1BP0DMV9 641 aaKnown RBP15.03■□□□□ -0
PDCD11-204ENST00000478543 NECTIN2Q92692 538 aa15.03■□□□□ -0
PDCD11-204ENST00000478543 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
PDCD11-204ENST00000478543 RRAGCQ9HB90 399 aa15.03■□□□□ -0
PDCD11-204ENST00000478543 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
PDCD11-204ENST00000478543 BCL2L13Q9BXK5 485 aa15.02■□□□□ -0
PDCD11-204ENST00000478543 HEG1Q9ULI3 1381 aa15.01□□□□□ -0.01
PDCD11-204ENST00000478543 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
PDCD11-204ENST00000478543 RARSP54136 660 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms