RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 HEG1Q9ULI3 1381 aa25.35■■□□□ 1.65
EPHB4-205ENST00000478459 ZPR1O75312 459 aa25.35■■□□□ 1.65
EPHB4-205ENST00000478459 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
EPHB4-205ENST00000478459 KIAA1551Q9HCM1 1747 aa25.34■■□□□ 1.65
EPHB4-205ENST00000478459 A0A0G2JLW4 131 aa25.34■■□□□ 1.65
EPHB4-205ENST00000478459 PRAMEF22A3QJZ6 481 aa25.34■■□□□ 1.65
EPHB4-205ENST00000478459 PIP4K2AP48426 406 aaPredicted RBP25.34■■□□□ 1.65
EPHB4-205ENST00000478459 DDR1Q08345 913 aa25.34■■□□□ 1.65
EPHB4-205ENST00000478459 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.65
EPHB4-205ENST00000478459 VSIG10Q8N0Z9 540 aa25.33■■□□□ 1.65
EPHB4-205ENST00000478459 ZNF784Q8NCA9 323 aaPredicted RBP25.33■■□□□ 1.65
EPHB4-205ENST00000478459 STARD3NLO95772 234 aa25.32■■□□□ 1.64
EPHB4-205ENST00000478459 NEFMP07197 916 aa25.32■■□□□ 1.64
EPHB4-205ENST00000478459 FMNL2Q96PY5 1086 aa25.32■■□□□ 1.64
EPHB4-205ENST00000478459 THUMPD2Q9BTF0 503 aaKnown RBP25.32■■□□□ 1.64
EPHB4-205ENST00000478459 A1BGP04217 495 aa25.31■■□□□ 1.64
EPHB4-205ENST00000478459 RALBP1Q15311 655 aa25.31■■□□□ 1.64
EPHB4-205ENST00000478459 PXDNLA1KZ92 1463 aa25.31■■□□□ 1.64
EPHB4-205ENST00000478459 C10orf71Q711Q0 1435 aa25.3■■□□□ 1.64
EPHB4-205ENST00000478459 GRIN3BO60391 1043 aa25.3■■□□□ 1.64
EPHB4-205ENST00000478459 BICDL1Q6ZP65 573 aa25.3■■□□□ 1.64
EPHB4-205ENST00000478459 AFDNP55196 1824 aaKnown RBP25.29■■□□□ 1.64
EPHB4-205ENST00000478459 DPEP1P16444 411 aa25.29■■□□□ 1.64
EPHB4-205ENST00000478459 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
EPHB4-205ENST00000478459 TBC1D2BQ9UPU7 963 aa25.29■■□□□ 1.64
EPHB4-205ENST00000478459 NARFQ9UHQ1 456 aa25.28■■□□□ 1.64
EPHB4-205ENST00000478459 BCL2L12Q9HB09 334 aa25.27■■□□□ 1.64
EPHB4-205ENST00000478459 BCS1LQ9Y276 419 aa25.27■■□□□ 1.64
EPHB4-205ENST00000478459 USP16Q9Y5T5 823 aa25.27■■□□□ 1.64
EPHB4-205ENST00000478459 MAPK8IP3Q9UPT6 1336 aa25.27■■□□□ 1.64
EPHB4-205ENST00000478459 POLRMTO00411 1230 aaKnown RBP25.26■■□□□ 1.63
EPHB4-205ENST00000478459 NFIXQ14938 502 aa25.26■■□□□ 1.63
EPHB4-205ENST00000478459 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
EPHB4-205ENST00000478459 TM4SF1P30408 202 aa25.25■■□□□ 1.63
EPHB4-205ENST00000478459 NFE2L2Q16236 605 aa25.25■■□□□ 1.63
EPHB4-205ENST00000478459 MYBBP1AQ9BQG0 1328 aaKnown RBP25.24■■□□□ 1.63
EPHB4-205ENST00000478459 CHRNA5P30532 468 aa25.24■■□□□ 1.63
EPHB4-205ENST00000478459 EIF5P55010 431 aaKnown RBP25.24■■□□□ 1.63
EPHB4-205ENST00000478459 TEX13AQ9BXU3 409 aaPredicted RBP25.24■■□□□ 1.63
EPHB4-205ENST00000478459 RRP7AQ9Y3A4 280 aaKnown RBP25.24■■□□□ 1.63
EPHB4-205ENST00000478459 TAF7Q15545 349 aaPredicted RBP25.23■■□□□ 1.63
EPHB4-205ENST00000478459 HTATSF1O43719 755 aaKnown RBP25.22■■□□□ 1.63
EPHB4-205ENST00000478459 TGFB2P61812 414 aa25.22■■□□□ 1.63
EPHB4-205ENST00000478459 CCDC24Q8N4L8 307 aa25.22■■□□□ 1.63
EPHB4-205ENST00000478459 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
EPHB4-205ENST00000478459 NEUROD2Q15784 382 aa25.21■■□□□ 1.63
EPHB4-205ENST00000478459 SCN7AQ01118 1682 aa25.2■■□□□ 1.63
EPHB4-205ENST00000478459 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
EPHB4-205ENST00000478459 ZNF526Q8TF50 670 aaPredicted RBP25.2■■□□□ 1.62
EPHB4-205ENST00000478459 KDM3BQ7LBC6 1761 aa25.2■■□□□ 1.62
EPHB4-205ENST00000478459 SERPINB2P05120 415 aa25.19■■□□□ 1.62
EPHB4-205ENST00000478459 SNRPA1P09661 255 aaKnown RBP25.19■■□□□ 1.62
EPHB4-205ENST00000478459 KCNA3P22001 575 aa25.19■■□□□ 1.62
EPHB4-205ENST00000478459 NPM2Q86SE8 214 aaKnown RBP25.19■■□□□ 1.62
EPHB4-205ENST00000478459 A0A087WZG4 1122 aa25.18■■□□□ 1.62
EPHB4-205ENST00000478459 IL6STP40189 918 aaPredicted RBP25.18■■□□□ 1.62
EPHB4-205ENST00000478459 RIPK4P57078 832 aa25.18■■□□□ 1.62
EPHB4-205ENST00000478459 PNNQ9H307 717 aaKnown RBP25.18■■□□□ 1.62
EPHB4-205ENST00000478459 ARHGAP27Q6ZUM4 889 aa25.17■■□□□ 1.62
EPHB4-205ENST00000478459 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
EPHB4-205ENST00000478459 CARMIL3Q8ND23 1372 aa25.17■■□□□ 1.62
EPHB4-205ENST00000478459 DZIP3Q86Y13 1208 aaKnown RBP25.16■■□□□ 1.62
EPHB4-205ENST00000478459 WDR43Q15061 677 aaKnown RBP eCLIP25.15■■□□□ 1.62
EPHB4-205ENST00000478459 PRKRIP1Q9H875 184 aaPredicted RBP25.15■■□□□ 1.62
EPHB4-205ENST00000478459 LAMB4A4D0S4 1761 aa25.15■■□□□ 1.62
EPHB4-205ENST00000478459 BCORQ6W2J9 1755 aa25.15■■□□□ 1.62
EPHB4-205ENST00000478459 NRXN2Q9P2S2 1712 aa25.15■■□□□ 1.62
EPHB4-205ENST00000478459 ATP10DQ9P241 1426 aa25.14■■□□□ 1.62
EPHB4-205ENST00000478459 NBPF26B4DH59 902 aa25.14■■□□□ 1.62
EPHB4-205ENST00000478459 NBPF10Q6P3W6 841 aaKnown RBP25.14■■□□□ 1.62
EPHB4-205ENST00000478459 NBPF15Q8N660 670 aa25.14■■□□□ 1.62
EPHB4-205ENST00000478459 CAMTA2O94983 1202 aa25.13■■□□□ 1.61
EPHB4-205ENST00000478459 TMPOP42166 694 aaKnown RBP25.13■■□□□ 1.61
EPHB4-205ENST00000478459 PIM2Q9P1W9 311 aa25.13■■□□□ 1.61
EPHB4-205ENST00000478459 ADAMTS8Q9UP79 889 aa25.12■■□□□ 1.61
EPHB4-205ENST00000478459 ANKRD31Q8N7Z5 1873 aa25.12■■□□□ 1.61
EPHB4-205ENST00000478459 ARFGEF1Q9Y6D6 1849 aa25.12■■□□□ 1.61
EPHB4-205ENST00000478459 DALRD3Q5D0E6 543 aaKnown RBP25.11■■□□□ 1.61
EPHB4-205ENST00000478459 TSPYL4Q9UJ04 414 aa25.11■■□□□ 1.61
EPHB4-205ENST00000478459 SENP3-EIF4A1A0A087X0R7 540 aa25.1■■□□□ 1.61
EPHB4-205ENST00000478459 FAM177BA6PVY3 158 aa25.1■■□□□ 1.61
EPHB4-205ENST00000478459 NPHP1O15259 732 aa25.1■■□□□ 1.61
EPHB4-205ENST00000478459 EIF4A1P60842 406 aaKnown RBP25.1■■□□□ 1.61
EPHB4-205ENST00000478459 MYL6BP14649 208 aa25.09■■□□□ 1.61
EPHB4-205ENST00000478459 ZEB1P37275 1124 aaPredicted RBP25.09■■□□□ 1.61
EPHB4-205ENST00000478459 C2CD5Q86YS7 1000 aa25.09■■□□□ 1.61
EPHB4-205ENST00000478459 PNISRQ8TF01 805 aaKnown RBP25.09■■□□□ 1.61
EPHB4-205ENST00000478459 LAS1LQ9Y4W2 734 aaKnown RBP25.09■■□□□ 1.61
EPHB4-205ENST00000478459 GIGYF1O75420 1035 aaPredicted RBP25.08■■□□□ 1.61
EPHB4-205ENST00000478459 SETDB2Q96T68 719 aa25.08■■□□□ 1.61
EPHB4-205ENST00000478459 CACNA1SQ13698 1873 aa25.08■■□□□ 1.61
EPHB4-205ENST00000478459 PRR5LQ6MZQ0 368 aa25.07■■□□□ 1.6
EPHB4-205ENST00000478459 ZNF219Q9P2Y4 722 aaPredicted RBP25.07■■□□□ 1.6
EPHB4-205ENST00000478459 DLEC1Q9Y238 1755 aa25.06■■□□□ 1.6
EPHB4-205ENST00000478459 NECTIN2Q92692 538 aa25.06■■□□□ 1.6
EPHB4-205ENST00000478459 RUNDC1Q96C34 613 aa25.06■■□□□ 1.6
EPHB4-205ENST00000478459 COL11A2P13942 1736 aaPredicted RBP25.06■■□□□ 1.6
EPHB4-205ENST00000478459 HLFQ16534 295 aa25.05■■□□□ 1.6
EPHB4-205ENST00000478459 ADCY9O60503 1353 aa25.05■■□□□ 1.6
EPHB4-205ENST00000478459 EIF2S2P20042 333 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms