RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 NLRP8Q86W28 1048 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 BEND7Q8N7W2 519 aaPredicted RBP10.26□□□□□ -0.77
SYCP3-205ENST00000478238 ZCCHC2Q9C0B9 1178 aaKnown RBP10.26□□□□□ -0.77
SYCP3-205ENST00000478238 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 GDF2Q9UK05 429 aaPredicted RBP10.26□□□□□ -0.77
SYCP3-205ENST00000478238 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
SYCP3-205ENST00000478238 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
SYCP3-205ENST00000478238 ZDHHC3Q9NYG2 299 aa10.25□□□□□ -0.77
SYCP3-205ENST00000478238 PCDHGC4Q9Y5F7 938 aa10.25□□□□□ -0.77
SYCP3-205ENST00000478238 SHISA8B8ZZ34 492 aa10.24□□□□□ -0.77
SYCP3-205ENST00000478238 ARSJQ5FYB0 599 aaPredicted RBP10.24□□□□□ -0.77
SYCP3-205ENST00000478238 GOLGA6L1Q8N7Z2 621 aa10.24□□□□□ -0.77
SYCP3-205ENST00000478238 GALNT6Q8NCL4 622 aa10.24□□□□□ -0.77
SYCP3-205ENST00000478238 A0A1W2PNR3 127 aa10.23□□□□□ -0.77
SYCP3-205ENST00000478238 TATP17735 454 aaPredicted RBP10.23□□□□□ -0.77
SYCP3-205ENST00000478238 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
SYCP3-205ENST00000478238 SCHIP1Q9P0W5 487 aaPredicted RBP10.23□□□□□ -0.77
SYCP3-205ENST00000478238 ATXN7O15265 892 aaPredicted RBP10.22□□□□□ -0.77
SYCP3-205ENST00000478238 TMEM132AQ24JP5 1023 aa10.22□□□□□ -0.77
SYCP3-205ENST00000478238 GPAT2Q6NUI2 795 aa10.22□□□□□ -0.77
SYCP3-205ENST00000478238 EDARADDQ8WWZ3 215 aa10.22□□□□□ -0.77
SYCP3-205ENST00000478238 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
SYCP3-205ENST00000478238 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
SYCP3-205ENST00000478238 USP17L3A6NCW0 530 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 USP17L4A6NCW7 530 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 EPHA4P54764 986 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 USP17L2Q6R6M4 530 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 USP17L1Q7RTZ2 530 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 TRIM50Q86XT4 487 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 PLEKHM2Q8IWE5 1019 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 ZIC5Q96T25 663 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 GGA1Q9UJY5 639 aa10.21□□□□□ -0.77
SYCP3-205ENST00000478238 DCDC2BA2VCK2 349 aa10.2□□□□□ -0.78
SYCP3-205ENST00000478238 SNRPNP63162 240 aaKnown RBP10.2□□□□□ -0.78
SYCP3-205ENST00000478238 FOXK2Q01167 660 aa10.2□□□□□ -0.78
SYCP3-205ENST00000478238 SLCO4C1Q6ZQN7 724 aa10.2□□□□□ -0.78
SYCP3-205ENST00000478238 ZDHHC1Q8WTX9 485 aa10.2□□□□□ -0.78
SYCP3-205ENST00000478238 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
SYCP3-205ENST00000478238 ATP9BO43861 1147 aa10.19□□□□□ -0.78
SYCP3-205ENST00000478238 MAPTP10636 758 aaKnown RBP10.19□□□□□ -0.78
SYCP3-205ENST00000478238 TXLNAP40222 546 aa10.19□□□□□ -0.78
SYCP3-205ENST00000478238 TNP2Q05952 138 aa10.19□□□□□ -0.78
SYCP3-205ENST00000478238 HCN2Q9UL51 889 aa10.19□□□□□ -0.78
SYCP3-205ENST00000478238 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
SYCP3-205ENST00000478238 KHNYNO15037 678 aaKnown RBP10.18□□□□□ -0.78
SYCP3-205ENST00000478238 ZBTB7BO15156 539 aaPredicted RBP10.18□□□□□ -0.78
SYCP3-205ENST00000478238 IGHA1P01876 353 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 ARAFP10398 606 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 TEAD4Q15561 434 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 BICDL1Q6ZP65 573 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 SLC9A9Q8IVB4 645 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 TNS4Q8IZW8 715 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 TPCN2Q8NHX9 752 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 GJA3Q9Y6H8 435 aa10.18□□□□□ -0.78
SYCP3-205ENST00000478238 FAM157BP0CG42 384 aa10.17□□□□□ -0.78
SYCP3-205ENST00000478238 CD33P20138 364 aa10.17□□□□□ -0.78
SYCP3-205ENST00000478238 CLDN10P78369 228 aa10.17□□□□□ -0.78
SYCP3-205ENST00000478238 TBCELQ5QJ74 424 aa10.17□□□□□ -0.78
SYCP3-205ENST00000478238 L3MBTL2Q969R5 705 aa10.17□□□□□ -0.78
SYCP3-205ENST00000478238 RRAGCQ9HB90 399 aa10.17□□□□□ -0.78
SYCP3-205ENST00000478238 NOS2P35228 1153 aa10.16□□□□□ -0.78
SYCP3-205ENST00000478238 FAM182BQ5T319 152 aa10.16□□□□□ -0.78
SYCP3-205ENST00000478238 CCDC102BQ68D86 513 aa10.16□□□□□ -0.78
SYCP3-205ENST00000478238 MKL2Q9ULH7 1088 aa10.16□□□□□ -0.78
SYCP3-205ENST00000478238 NEURL1BA8MQ27 555 aa10.15□□□□□ -0.78
SYCP3-205ENST00000478238 EPXP11678 715 aa10.15□□□□□ -0.78
SYCP3-205ENST00000478238 AMPD1P23109 780 aa10.15□□□□□ -0.78
SYCP3-205ENST00000478238 SAMD5Q5TGI4 173 aa10.15□□□□□ -0.78
SYCP3-205ENST00000478238 EML1O00423 815 aa10.14□□□□□ -0.79
SYCP3-205ENST00000478238 SUZ12Q15022 739 aaKnown RBP10.14□□□□□ -0.79
SYCP3-205ENST00000478238 PLA2G4EQ3MJ16 856 aa10.14□□□□□ -0.79
SYCP3-205ENST00000478238 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
SYCP3-205ENST00000478238 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
SYCP3-205ENST00000478238 OGFOD1Q8N543 542 aa10.14□□□□□ -0.79
SYCP3-205ENST00000478238 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
SYCP3-205ENST00000478238 ZNF232Q9UNY5 417 aa10.14□□□□□ -0.79
SYCP3-205ENST00000478238 HOXB4P17483 251 aaPredicted RBP10.13□□□□□ -0.79
SYCP3-205ENST00000478238 LARGE2Q8N3Y3 721 aa10.13□□□□□ -0.79
SYCP3-205ENST00000478238 GLMNQ92990 594 aa10.13□□□□□ -0.79
SYCP3-205ENST00000478238 SERTM1A2A2V5 107 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 EFSO43281 561 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 ITGB2P05107 769 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 ADH6P28332 368 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 SH3PXD2AQ5TCZ1 1133 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 BTBD6Q96KE9 485 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
SYCP3-205ENST00000478238 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 KLF15Q9UIH9 416 aa10.12□□□□□ -0.79
SYCP3-205ENST00000478238 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
SYCP3-205ENST00000478238 M0R2N6 131 aa10.11□□□□□ -0.79
SYCP3-205ENST00000478238 LRRC69Q6ZNQ3 347 aa10.11□□□□□ -0.79
SYCP3-205ENST00000478238 C7orf43Q8WVR3 580 aa10.11□□□□□ -0.79
SYCP3-205ENST00000478238 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
SYCP3-205ENST00000478238 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
SYCP3-205ENST00000478238 PSMA6P60900 246 aaKnown RBP10.1□□□□□ -0.79
SYCP3-205ENST00000478238 LAMC2Q13753 1193 aa10.1□□□□□ -0.79
SYCP3-205ENST00000478238 LINC00114Q6XXX2 140 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms