RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 API5Q9BZZ5 524 aaKnown RBP9.51□□□□□ -0.89
SYCP3-204ENST00000478139 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 DBF4Q9UBU7 674 aaPredicted RBP9.51□□□□□ -0.89
SYCP3-204ENST00000478139 IGSF3O75054 1194 aa9.5□□□□□ -0.89
SYCP3-204ENST00000478139 PIGBQ92521 554 aa9.5□□□□□ -0.89
SYCP3-204ENST00000478139 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
SYCP3-204ENST00000478139 TBC1D2BQ9UPU7 963 aa9.5□□□□□ -0.89
SYCP3-204ENST00000478139 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
SYCP3-204ENST00000478139 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
SYCP3-204ENST00000478139 SLC27A3Q5K4L6 730 aa9.49□□□□□ -0.89
SYCP3-204ENST00000478139 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
SYCP3-204ENST00000478139 ZNF496Q96IT1 587 aaPredicted RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 ATF5Q9Y2D1 282 aaPredicted RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 AHDC1Q5TGY3 1603 aaPredicted RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 GPTP24298 496 aa9.49□□□□□ -0.89
SYCP3-204ENST00000478139 EZH2Q15910 746 aaKnown RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 COL5A2P05997 1499 aaPredicted RBP9.49□□□□□ -0.89
SYCP3-204ENST00000478139 KCNJ4P48050 445 aa9.49□□□□□ -0.89
SYCP3-204ENST00000478139 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
SYCP3-204ENST00000478139 HYPKQ9NX55 129 aa9.49□□□□□ -0.89
SYCP3-204ENST00000478139 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
SYCP3-204ENST00000478139 RLBP1P12271 317 aa9.48□□□□□ -0.89
SYCP3-204ENST00000478139 ST5P78524 1137 aa9.48□□□□□ -0.89
SYCP3-204ENST00000478139 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
SYCP3-204ENST00000478139 ZNF622Q969S3 477 aaKnown RBP eCLIP9.48□□□□□ -0.89
SYCP3-204ENST00000478139 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
SYCP3-204ENST00000478139 GORABQ5T7V8 394 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 WWC3Q9ULE0 1092 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 PCDHB15Q9Y5E8 787 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 MED1Q15648 1581 aaPredicted RBP9.47□□□□□ -0.89
SYCP3-204ENST00000478139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.47□□□□□ -0.89
SYCP3-204ENST00000478139 PPP1R42Q7Z4L9 355 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 ANXA1P04083 346 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 CDK11BP21127 795 aaKnown RBP9.47□□□□□ -0.89
SYCP3-204ENST00000478139 NLGN1Q8N2Q7 840 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 ZNF428Q96B54 188 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 TRMT112Q9UI30 125 aaKnown RBP9.47□□□□□ -0.89
SYCP3-204ENST00000478139 NIP7Q9Y221 180 aaKnown RBP eCLIP9.47□□□□□ -0.89
SYCP3-204ENST00000478139 KIF16BQ96L93 1317 aa9.47□□□□□ -0.89
SYCP3-204ENST00000478139 ZBTB7AO95365 584 aa9.46□□□□□ -0.89
SYCP3-204ENST00000478139 A1BGP04217 495 aa9.46□□□□□ -0.89
SYCP3-204ENST00000478139 ZKSCAN2Q63HK3 967 aa9.46□□□□□ -0.89
SYCP3-204ENST00000478139 RARSP54136 660 aaKnown RBP9.46□□□□□ -0.89
SYCP3-204ENST00000478139 BECN1Q14457 450 aa9.46□□□□□ -0.89
SYCP3-204ENST00000478139 GPR162Q16538 588 aa9.46□□□□□ -0.89
SYCP3-204ENST00000478139 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.89
SYCP3-204ENST00000478139 RPGRQ92834 1020 aaKnown RBP9.46□□□□□ -0.89
SYCP3-204ENST00000478139 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.89
SYCP3-204ENST00000478139 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.9
SYCP3-204ENST00000478139 MBIPQ9NS73 344 aa9.46□□□□□ -0.9
SYCP3-204ENST00000478139 COPS6Q7L5N1 327 aa9.45□□□□□ -0.9
SYCP3-204ENST00000478139 BABAM1Q9NWV8 329 aa9.45□□□□□ -0.9
SYCP3-204ENST00000478139 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
SYCP3-204ENST00000478139 CRKLP46109 303 aaKnown RBP9.45□□□□□ -0.9
SYCP3-204ENST00000478139 XAGE3Q8WTP9 111 aa9.45□□□□□ -0.9
SYCP3-204ENST00000478139 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 ADRA2BP18089 450 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 SRCIN1Q9C0H9 1055 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 CAMTA1Q9Y6Y1 1673 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 HMMRO75330 724 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 MYD88Q99836 296 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 ATG3Q9NT62 314 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 NYXQ9GZU5 481 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 SHPRHQ149N8 1683 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 STRCP1A6NGW2 1772 aa9.44□□□□□ -0.9
SYCP3-204ENST00000478139 IL16Q14005 1332 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 SOCS7O14512 581 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 APBB1O00213 710 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 CNBD1Q8NA66 436 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.9
SYCP3-204ENST00000478139 MPHOSPH8Q99549 860 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
SYCP3-204ENST00000478139 CHPF2Q9P2E5 772 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
SYCP3-204ENST00000478139 UBTFL1P0CB47 393 aaPredicted RBP9.43□□□□□ -0.9
SYCP3-204ENST00000478139 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 ANTXR1Q9H6X2 564 aa9.43□□□□□ -0.9
SYCP3-204ENST00000478139 TBC1D32Q96NH3 1257 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
SYCP3-204ENST00000478139 USP16Q9Y5T5 823 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 BCL9LQ86UU0 1499 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 RGPD8O14715 1765 aaPredicted RBP9.42□□□□□ -0.9
SYCP3-204ENST00000478139 SLIT2O94813 1529 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 KCNQ3O43525 872 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 BRD2P25440 801 aaKnown RBP9.42□□□□□ -0.9
SYCP3-204ENST00000478139 SLC15A2Q16348 729 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 ZBTB1Q9Y2K1 713 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms