RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
SF3B6-202ENST00000478050 TSPY4P0CV99 314 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 TSPY10P0CW01 314 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 GJA5P36382 358 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 CEBPAP49715 358 aaPredicted RBP6.78□□□□□ -1.32
SF3B6-202ENST00000478050 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 VWA5B2Q8N398 1253 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 CCDC155Q8N6L0 562 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 BEGAINQ9BUH8 593 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 IQGAP3Q86VI3 1631 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.33
SF3B6-202ENST00000478050 SV2AQ7L0J3 742 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 CCDC116Q8IYX3 515 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 WHAMMQ8TF30 809 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 TSC1Q92574 1164 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 ZBTB3Q9H5J0 574 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 PCDHB15Q9Y5E8 787 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 NUP155O75694 1391 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 KIF15Q9NS87 1388 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 E9PCH4 1651 aa6.77□□□□□ -1.33
SF3B6-202ENST00000478050 ARHGAP5Q13017 1502 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.76□□□□□ -1.332e-18■■□□□ 12.1
SF3B6-202ENST00000478050 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 LAMC1P11047 1609 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 SETD1AO15047 1707 aaKnown RBP6.76□□□□□ -1.33
SF3B6-202ENST00000478050 SLURP2P0DP57 97 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 PSMG3-AS1Q96PY0 264 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 TBC1D2Q9BYX2 928 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 PGPEP1Q9NXJ5 209 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 MAP4K5Q9Y4K4 846 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 TRPM1Q7Z4N2 1603 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 FAM135AQ9P2D6 1515 aa6.76□□□□□ -1.33
SF3B6-202ENST00000478050 ROCK2O75116 1388 aaKnown RBP6.75□□□□□ -1.33
SF3B6-202ENST00000478050 USP47Q96K76 1375 aa6.75□□□□□ -1.33
SF3B6-202ENST00000478050 MAGEB6P1A0A0J9YX57 407 aa6.75□□□□□ -1.33
SF3B6-202ENST00000478050 ARHGEF15O94989 841 aa6.75□□□□□ -1.33
SF3B6-202ENST00000478050 NBPF14Q5TI25 921 aa6.75□□□□□ -1.33
SF3B6-202ENST00000478050 PRKRIP1Q9H875 184 aaPredicted RBP6.75□□□□□ -1.33
SF3B6-202ENST00000478050 KIF7Q2M1P5 1343 aa6.75□□□□□ -1.33
SF3B6-202ENST00000478050 NEO1Q92859 1461 aa6.74□□□□□ -1.33
SF3B6-202ENST00000478050 ITGA6P23229 1130 aa6.74□□□□□ -1.33
SF3B6-202ENST00000478050 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
SF3B6-202ENST00000478050 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
SF3B6-202ENST00000478050 GIGYF2Q6Y7W6 1299 aaKnown RBP6.74□□□□□ -1.33
SF3B6-202ENST00000478050 C1QTNF2Q9BXJ5 285 aa6.74□□□□□ -1.33
SF3B6-202ENST00000478050 EIF2AK4Q9P2K8 1649 aaKnown RBP6.74□□□□□ -1.33
SF3B6-202ENST00000478050 DUOX2Q9NRD8 1548 aa6.74□□□□□ -1.33
SF3B6-202ENST00000478050 MAGI2Q86UL8 1455 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 SRCAPQ6ZRS2 3230 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 SLC35F4A4IF30 521 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 SPINT1O43278 529 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 ZMYND10O75800 440 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 HNRNPMP52272 730 aaKnown RBP eCLIP6.73□□□□□ -1.33
SF3B6-202ENST00000478050 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 PRPF38BQ5VTL8 546 aaKnown RBP6.73□□□□□ -1.33
SF3B6-202ENST00000478050 CARD14Q9BXL6 1004 aa6.73□□□□□ -1.33
SF3B6-202ENST00000478050 ABCC1P33527 1531 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 NUTM2BA6NNL0 878 aaPredicted RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 NUTM2EB1AL46 878 aaPredicted RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 PER1O15534 1290 aaPredicted RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 CBLBQ13191 982 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 PPP1R26Q5T8A7 1209 aaPredicted RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 NUTM2DQ5VT03 806 aaPredicted RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 ERICH6BQ5W0A0 696 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 RIC3Q7Z5B4 369 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 NUTM2AQ8IVF1 878 aaPredicted RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 TRMT44Q8IYL2 757 aaKnown RBP6.72□□□□□ -1.33
SF3B6-202ENST00000478050 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 ERBINQ96RT1 1412 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 ZBED9Q6R2W3 1325 aa6.72□□□□□ -1.33
SF3B6-202ENST00000478050 DHX29Q7Z478 1369 aaKnown RBP6.71□□□□□ -1.33
SF3B6-202ENST00000478050 FRMPD1Q5SYB0 1578 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 MSTNO14793 375 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 ADAMTS2O95450 1211 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 HOMEZQ8IX15 550 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 ESF1Q9H501 851 aaKnown RBP6.71□□□□□ -1.34
SF3B6-202ENST00000478050 MRS2Q9HD23 443 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 ENAMQ9NRM1 1142 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 RNF17Q9BXT8 1623 aaKnown RBP6.71□□□□□ -1.34
SF3B6-202ENST00000478050 ATP10AO60312 1499 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 CPS1P31327 1500 aa6.71□□□□□ -1.34
SF3B6-202ENST00000478050 KTN1Q86UP2 1357 aaKnown RBP6.7□□□□□ -1.34
SF3B6-202ENST00000478050 CEP152O94986 1710 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 CCDC144AA2RUR9 1427 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 PLCH2O75038 1416 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 AMHR2Q16671 573 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 Q6ZVU0 165 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 SH3RF1Q7Z6J0 888 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 PRDM15P57071 1507 aaPredicted RBP6.7□□□□□ -1.34
SF3B6-202ENST00000478050 ZFYVE16Q7Z3T8 1539 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 SPHKAPQ2M3C7 1700 aa6.7□□□□□ -1.34
SF3B6-202ENST00000478050 DEPDC5O75140 1603 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 CAMSAP1Q5T5Y3 1602 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 PRAG1Q86YV5 1406 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 TRAPPC8Q9Y2L5 1435 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 ZNF326Q5BKZ1 582 aaKnown RBP6.69□□□□□ -1.34
SF3B6-202ENST00000478050 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 SH3BP5LQ7L8J4 393 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 CARD11Q9BXL7 1154 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms