RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 ABHD17AQ96GS6 310 aa9.56□□□□□ -0.88
LMBR1-216ENST00000477983 PCDHGC4Q9Y5F7 938 aa9.56□□□□□ -0.88
LMBR1-216ENST00000477983 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
LMBR1-216ENST00000477983 FGFR3P22607 806 aa9.55□□□□□ -0.88
LMBR1-216ENST00000477983 CTBSQ01459 385 aa9.55□□□□□ -0.88
LMBR1-216ENST00000477983 PLEKHM2Q8IWE5 1019 aa9.55□□□□□ -0.88
LMBR1-216ENST00000477983 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
LMBR1-216ENST00000477983 A0A1W2PNR3 127 aa9.54□□□□□ -0.88
LMBR1-216ENST00000477983 FOXK2Q01167 660 aa9.54□□□□□ -0.88
LMBR1-216ENST00000477983 NBPF1Q3BBV0 1214 aa9.54□□□□□ -0.88
LMBR1-216ENST00000477983 GOLGA6L1Q8N7Z2 621 aa9.54□□□□□ -0.88
LMBR1-216ENST00000477983 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.54□□□□□ -0.88
LMBR1-216ENST00000477983 GALNT6Q8NCL4 622 aa9.54□□□□□ -0.88
LMBR1-216ENST00000477983 ZNF358Q9NW07 568 aa9.54□□□□□ -0.88
LMBR1-216ENST00000477983 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
LMBR1-216ENST00000477983 BMP4P12644 408 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 EPHA4P54764 986 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 TMEM132AQ24JP5 1023 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 EDARADDQ8WWZ3 215 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
LMBR1-216ENST00000477983 SHISA8B8ZZ34 492 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 IGHA1P01876 353 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 TATP17735 454 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-216ENST00000477983 TEAD4Q15561 434 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 HCN2Q9UL51 889 aa9.52□□□□□ -0.89
LMBR1-216ENST00000477983 ATXN7O15265 892 aaPredicted RBP9.51□□□□□ -0.89
LMBR1-216ENST00000477983 TNP2Q05952 138 aa9.51□□□□□ -0.89
LMBR1-216ENST00000477983 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
LMBR1-216ENST00000477983 FAM182BQ5T319 152 aa9.51□□□□□ -0.89
LMBR1-216ENST00000477983 PSME1Q06323 249 aa9.5□□□□□ -0.89
LMBR1-216ENST00000477983 SLCO4C1Q6ZQN7 724 aa9.5□□□□□ -0.89
LMBR1-216ENST00000477983 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
LMBR1-216ENST00000477983 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
LMBR1-216ENST00000477983 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
LMBR1-216ENST00000477983 ATP9BO43861 1147 aa9.49□□□□□ -0.89
LMBR1-216ENST00000477983 ARAFP10398 606 aa9.49□□□□□ -0.89
LMBR1-216ENST00000477983 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
LMBR1-216ENST00000477983 NOS2P35228 1153 aa9.49□□□□□ -0.89
LMBR1-216ENST00000477983 ATP1A2P50993 1020 aa9.49□□□□□ -0.89
LMBR1-216ENST00000477983 SNRPNP63162 240 aaKnown RBP9.49□□□□□ -0.89
LMBR1-216ENST00000477983 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
LMBR1-216ENST00000477983 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
LMBR1-216ENST00000477983 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 FAM157BP0CG42 384 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
LMBR1-216ENST00000477983 CLDN10P78369 228 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 GPAT2Q6NUI2 795 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
LMBR1-216ENST00000477983 M0R2N6 131 aa9.47□□□□□ -0.89
LMBR1-216ENST00000477983 EML1O00423 815 aa9.47□□□□□ -0.89
LMBR1-216ENST00000477983 TXLNAP40222 546 aa9.47□□□□□ -0.89
LMBR1-216ENST00000477983 TNS4Q8IZW8 715 aa9.47□□□□□ -0.89
LMBR1-216ENST00000477983 LARGE2Q8N3Y3 721 aa9.47□□□□□ -0.89
LMBR1-216ENST00000477983 AVENQ9NQS1 362 aaPredicted RBP9.47□□□□□ -0.89
LMBR1-216ENST00000477983 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
LMBR1-216ENST00000477983 EPXP11678 715 aa9.46□□□□□ -0.9
LMBR1-216ENST00000477983 CCDC102BQ68D86 513 aa9.46□□□□□ -0.9
LMBR1-216ENST00000477983 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
LMBR1-216ENST00000477983 MKL2Q9ULH7 1088 aa9.46□□□□□ -0.9
LMBR1-216ENST00000477983 DCDC2BA2VCK2 349 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 KHNYNO15037 678 aaKnown RBP9.45□□□□□ -0.9
LMBR1-216ENST00000477983 EFSO43281 561 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 BTBD6Q96KE9 485 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
LMBR1-216ENST00000477983 KLF15Q9UIH9 416 aa9.45□□□□□ -0.9
LMBR1-216ENST00000477983 GPC6Q9Y625 555 aaPredicted RBP9.45□□□□□ -0.9
LMBR1-216ENST00000477983 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
LMBR1-216ENST00000477983 DKK1O94907 266 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 ITGB2P05107 769 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 PLA2G4EQ3MJ16 856 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 SIX5Q8N196 739 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 OGFOD1Q8N543 542 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 GJA3Q9Y6H8 435 aa9.44□□□□□ -0.9
LMBR1-216ENST00000477983 SERTM1A2A2V5 107 aa9.43□□□□□ -0.9
LMBR1-216ENST00000477983 NEURL1BA8MQ27 555 aa9.43□□□□□ -0.9
LMBR1-216ENST00000477983 CD33P20138 364 aa9.43□□□□□ -0.9
LMBR1-216ENST00000477983 ALYREFQ86V81 257 aaKnown RBP9.43□□□□□ -0.9
LMBR1-216ENST00000477983 ADH6P28332 368 aa9.42□□□□□ -0.9
LMBR1-216ENST00000477983 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
LMBR1-216ENST00000477983 TBCELQ5QJ74 424 aa9.42□□□□□ -0.9
LMBR1-216ENST00000477983 PROSER2Q86WR7 435 aaPredicted RBP9.42□□□□□ -0.9
LMBR1-216ENST00000477983 MARK1Q9P0L2 795 aa9.42□□□□□ -0.9
LMBR1-216ENST00000477983 PSMA6P60900 246 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms