RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SSFA2P28290 1259 aa7.61□□□□□ -1.19
TRA2B-211ENST00000477939 WWC1Q8IX03 1113 aa7.61□□□□□ -1.19
TRA2B-211ENST00000477939 IFNL2Q8IZJ0 200 aa7.61□□□□□ -1.19
TRA2B-211ENST00000477939 FLAD1Q8NFF5 587 aa7.61□□□□□ -1.19
TRA2B-211ENST00000477939 PANK3Q9H999 370 aa7.61□□□□□ -1.19
TRA2B-211ENST00000477939 GNPATO15228 680 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 HSP90AA1P07900 732 aaKnown RBP7.6□□□□□ -1.19
TRA2B-211ENST00000477939 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
TRA2B-211ENST00000477939 FAM193AP78312 1265 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 IRX6P78412 446 aaPredicted RBP7.6□□□□□ -1.19
TRA2B-211ENST00000477939 AEBP1Q8IUX7 1158 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 IL27Q8NEV9 243 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 SLC4A9Q96Q91 983 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 CD2APQ9Y5K6 639 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 TJP1Q07157 1748 aa7.6□□□□□ -1.19
TRA2B-211ENST00000477939 ADCY9O60503 1353 aa7.59□□□□□ -1.19
TRA2B-211ENST00000477939 VIRMAQ69YN4 1812 aaKnown RBP7.59□□□□□ -1.19
TRA2B-211ENST00000477939 HMGB2P26583 209 aaKnown RBP7.59□□□□□ -1.19
TRA2B-211ENST00000477939 ATP6V1AP38606 617 aa7.59□□□□□ -1.19
TRA2B-211ENST00000477939 C1QTNF8P60827 252 aa7.59□□□□□ -1.19
TRA2B-211ENST00000477939 DNAJC2Q99543 621 aaKnown RBP7.59□□□□□ -1.19
TRA2B-211ENST00000477939 ATP10DQ9P241 1426 aa7.59□□□□□ -1.19
TRA2B-211ENST00000477939 N4BP2Q86UW6 1770 aaPredicted RBP7.59□□□□□ -1.2
TRA2B-211ENST00000477939 BRCA1P38398 1863 aaKnown RBP7.58□□□□□ -1.2
TRA2B-211ENST00000477939 ADAMTS7Q9UKP4 1686 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 PXDNLA1KZ92 1463 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 MRC1P22897 1456 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 ERVV-2B6SEH9 535 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 MAFGO15525 162 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 ZNF530Q6P9A1 599 aaPredicted RBP7.58□□□□□ -1.2
TRA2B-211ENST00000477939 DCAF5Q96JK2 942 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 BRPF3Q9ULD4 1205 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 WWC3Q9ULE0 1092 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
TRA2B-211ENST00000477939 C10orf71Q711Q0 1435 aa7.58□□□□□ -1.2
TRA2B-211ENST00000477939 CNTNAP4Q9C0A0 1308 aa7.57□□□□□ -1.2
TRA2B-211ENST00000477939 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
TRA2B-211ENST00000477939 GIGYF1O75420 1035 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-211ENST00000477939 HSP90AB1P08238 724 aaKnown RBP7.57□□□□□ -1.2
TRA2B-211ENST00000477939 MORC1Q86VD1 984 aa7.57□□□□□ -1.2
TRA2B-211ENST00000477939 CEP120Q8N960 986 aa7.57□□□□□ -1.2
TRA2B-211ENST00000477939 KIF7Q2M1P5 1343 aa7.56□□□□□ -1.2
TRA2B-211ENST00000477939 MMP10P09238 476 aa7.56□□□□□ -1.2
TRA2B-211ENST00000477939 IL13P35225 146 aa7.56□□□□□ -1.2
TRA2B-211ENST00000477939 AMOTQ4VCS5 1084 aa7.56□□□□□ -1.2
TRA2B-211ENST00000477939 PLEKHO1Q53GL0 409 aaPredicted RBP7.56□□□□□ -1.2
TRA2B-211ENST00000477939 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
TRA2B-211ENST00000477939 SULT6B1Q6IMI4 303 aa7.56□□□□□ -1.2
TRA2B-211ENST00000477939 RBM42Q9BTD8 480 aaKnown RBP7.56□□□□□ -1.2
TRA2B-211ENST00000477939 COL3A1P02461 1466 aaPredicted RBP7.55□□□□□ -1.2
TRA2B-211ENST00000477939 ZNF316A6NFI3 1004 aaPredicted RBP7.55□□□□□ -1.2
TRA2B-211ENST00000477939 GYS1P13807 737 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 MTHFSP49914 203 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 MMP14P50281 582 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 CABP4P57796 275 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 C1orf141Q5JVX7 400 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
TRA2B-211ENST00000477939 KNSTRNQ9Y448 316 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 KCPQ6ZWJ8 1503 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 UBR2Q8IWV8 1755 aa7.55□□□□□ -1.2
TRA2B-211ENST00000477939 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
TRA2B-211ENST00000477939 ADRA2BP18089 450 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 CRKLP46109 303 aaKnown RBP7.54□□□□□ -1.2
TRA2B-211ENST00000477939 ANAPC15P60006 121 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
TRA2B-211ENST00000477939 CERS3Q8IU89 383 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 GPATCH11Q8N954 259 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
TRA2B-211ENST00000477939 PRDM4Q9UKN5 801 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 ARFGEF1Q9Y6D6 1849 aa7.54□□□□□ -1.2
TRA2B-211ENST00000477939 RPS6KA4O75676 772 aa7.53□□□□□ -1.2
TRA2B-211ENST00000477939 IRX3P78415 501 aaPredicted RBP7.53□□□□□ -1.2
TRA2B-211ENST00000477939 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
TRA2B-211ENST00000477939 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
TRA2B-211ENST00000477939 PDCL3Q9H2J4 239 aa7.53□□□□□ -1.2
TRA2B-211ENST00000477939 PRDM10Q9NQV6 1147 aa7.53□□□□□ -1.2
TRA2B-211ENST00000477939 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.2
TRA2B-211ENST00000477939 PCNTO95613 3336 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 SIPA1L3O60292 1781 aaPredicted RBP7.52□□□□□ -1.21
TRA2B-211ENST00000477939 PER1O15534 1290 aaPredicted RBP7.52□□□□□ -1.21
TRA2B-211ENST00000477939 HMOX1P09601 288 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 RFC4P35249 363 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 NLGN1Q8N2Q7 840 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 ZNF526Q8TF50 670 aaPredicted RBP7.52□□□□□ -1.21
TRA2B-211ENST00000477939 MAP7D2Q96T17 732 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 GPBP1L1Q9HC44 474 aaPredicted RBP7.52□□□□□ -1.21
TRA2B-211ENST00000477939 SRP68Q9UHB9 627 aaKnown RBP7.52□□□□□ -1.21
TRA2B-211ENST00000477939 AFDNP55196 1824 aaKnown RBP7.52□□□□□ -1.21
TRA2B-211ENST00000477939 NRXN2Q9P2S2 1712 aa7.52□□□□□ -1.21
TRA2B-211ENST00000477939 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
TRA2B-211ENST00000477939 A0A0G2JLW4 131 aa7.51□□□□□ -1.21
TRA2B-211ENST00000477939 TGFB2P61812 414 aa7.51□□□□□ -1.21
TRA2B-211ENST00000477939 DDR1Q08345 913 aa7.51□□□□□ -1.21
TRA2B-211ENST00000477939 FKBP8Q14318 412 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms