RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
SMARCB1-206ENST00000477836 MAP2K1Q02750 393 aaPredicted RBP13.6□□□□□ -0.23
SMARCB1-206ENST00000477836 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
SMARCB1-206ENST00000477836 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 LDHDQ86WU2 507 aa13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
SMARCB1-206ENST00000477836 TONSLQ96HA7 1378 aa13.58□□□□□ -0.23
SMARCB1-206ENST00000477836 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.23
SMARCB1-206ENST00000477836 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 ZPR1O75312 459 aa13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 EYA1Q99502 592 aa13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-206ENST00000477836 H0YIN7 160 aa13.57□□□□□ -0.24
SMARCB1-206ENST00000477836 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
SMARCB1-206ENST00000477836 IQCA1LA6NCM1 817 aa13.56□□□□□ -0.24
SMARCB1-206ENST00000477836 RASSF10A6NK89 507 aa13.56□□□□□ -0.24
SMARCB1-206ENST00000477836 C21orf2O43822 256 aa13.56□□□□□ -0.24
SMARCB1-206ENST00000477836 NFIXQ14938 502 aa13.56□□□□□ -0.24
SMARCB1-206ENST00000477836 SERPINB2P05120 415 aa13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 CABP4P57796 275 aa13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 TAF1DQ9H5J8 278 aaPredicted RBP13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
SMARCB1-206ENST00000477836 ADAMTS7Q9UKP4 1686 aa13.54□□□□□ -0.24
SMARCB1-206ENST00000477836 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
SMARCB1-206ENST00000477836 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
SMARCB1-206ENST00000477836 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
SMARCB1-206ENST00000477836 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
SMARCB1-206ENST00000477836 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
SMARCB1-206ENST00000477836 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
SMARCB1-206ENST00000477836 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
SMARCB1-206ENST00000477836 TJP1Q07157 1748 aa13.53□□□□□ -0.24
SMARCB1-206ENST00000477836 SCN4AP35499 1836 aa13.53□□□□□ -0.24
SMARCB1-206ENST00000477836 TESK2Q96S53 571 aa13.52□□□□□ -0.25
SMARCB1-206ENST00000477836 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
SMARCB1-206ENST00000477836 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
SMARCB1-206ENST00000477836 GRM1Q13255 1194 aa13.51□□□□□ -0.25
SMARCB1-206ENST00000477836 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
SMARCB1-206ENST00000477836 L3MBTL3Q96JM7 780 aaPredicted RBP13.51□□□□□ -0.25
SMARCB1-206ENST00000477836 MCOLN1Q9GZU1 580 aa13.51□□□□□ -0.25
SMARCB1-206ENST00000477836 NARFQ9UHQ1 456 aa13.51□□□□□ -0.25
SMARCB1-206ENST00000477836 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
SMARCB1-206ENST00000477836 LTBP3Q9NS15 1303 aa13.5□□□□□ -0.25
SMARCB1-206ENST00000477836 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
SMARCB1-206ENST00000477836 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
SMARCB1-206ENST00000477836 CNTROBQ8N137 903 aa13.5□□□□□ -0.25
SMARCB1-206ENST00000477836 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
SMARCB1-206ENST00000477836 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
SMARCB1-206ENST00000477836 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
SMARCB1-206ENST00000477836 CAPNS2Q96L46 248 aa13.49□□□□□ -0.25
SMARCB1-206ENST00000477836 BCL2L12Q9HB09 334 aa13.49□□□□□ -0.25
SMARCB1-206ENST00000477836 HACL1Q9UJ83 578 aa13.49□□□□□ -0.25
SMARCB1-206ENST00000477836 COL15A1P39059 1388 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 ANKRD26Q9UPS8 1709 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 EPHX2P34913 555 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 MTHFSP49914 203 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 THSD7BQ9C0I4 1608 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
SMARCB1-206ENST00000477836 PDE4DIPQ5VU43 2346 aa13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 ANKRD31Q8N7Z5 1873 aa13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 PDE6BP35913 854 aa13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 ECE1P42892 770 aa13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
SMARCB1-206ENST00000477836 ZNF541Q9H0D2 1346 aa13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 EIF4A2Q14240 407 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 BRIP1Q9BX63 1249 aa13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.25
SMARCB1-206ENST00000477836 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
SMARCB1-206ENST00000477836 DGKZQ13574 1117 aa13.45□□□□□ -0.26
SMARCB1-206ENST00000477836 ZBTB1Q9Y2K1 713 aa13.45□□□□□ -0.26
SMARCB1-206ENST00000477836 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 SLX4Q8IY92 1834 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 CASP8AP2Q9UKL3 1982 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
SMARCB1-206ENST00000477836 AOC2O75106 756 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms